178 research outputs found
Strengthening mechanisms of graphene sheets in aluminium matrix nanocomposites
Uniform dispersion of SiC nanoparticles with a high propensity to agglomerate within a thixoformed aluminium matrix was attained using a graphene encapsulating approach. The analytical model devised in this study has demonstrated the significant role of shear lag and thermally activated dislocation mechanisms in strengthening aluminium metal matrix composites due to the exceptional negative thermal expansion coefficient of graphene sheets. This, in turn, triggers the pinning capacity of nano-sized rod-liked aluminium carbide, prompting strong interface bonding for SiC nanoparticles with the matrix, thereby enhancing tensile elongation
The Effect of Arbuscular Mycorrhiza Fungi on Iron and Manganese Concentration of Berssem Clover by Cadmium Stress
In this study, a factorial experiment was performed in completely randomized design (CRD) with threefactors: arbuscularmycorrhizal fungi with two levels (inoculated and non-inoculated soil) and cadmium with six levels( , , , , and ppm). The results showed that effect of cadmium levels on iron and manganese concentrationwas significant in one percent level of statistical. In ppm cadmium concentration in soil, a reducediron were onconcentration of Iron ( and ) and manganese ( % and %) in root and aerial respectively.Butarbuscularmycorrhiza fungi increasediron concentration % and % in theroot and aerial, and manganeseconcentration % and . % in root and aerial plant respectively
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A New Framework to Estimate Breathing Rate from Electrocardiogram, Photoplethysmogram, and Blood Pressure Signals
Breathing Rate (BR) is a key physiological parameter measured in a wide range of clinical settings. However, it is still widely measured manually. In this paper, a novel framework is proposed to estimate the BR from an electrocardiogram (ECG), a photoplethysmogram (PPG), or a blood pressure (BP) signal. The framework uses Empirical Mode Decomposition (EMD) and Discrete Wavelet Transform (DWT) methods to extract respiratory signals, taking advantage of both time and frequency domain
information. An Extended Kalman Filter (EKF), incorporating a Signal Quality Index (SQI), enabled our method to achieve acceptable performance even for significantly distorted periods of the signals. Using
state vector fusion, the output signals are combined and finally the BR is estimated. The framework was tested on two publicly available clinical databases: the MIT-BIH Polysomnographic and BIDMC databases.
Performance was evaluated using the mean absolute percentage error (MAPE). The results indicated high accuracy: MAPEs on the two databases of 3.9% and 3.6% for ECG signals, 6.0% for PPG, and 5.0% for BP signals. The results also indicated high robustness to noise down to 0dB. Therefore, this framework may have utility for BR monitoring in high noise settings
Application of Linear Discriminant Analysis in Dimensionality Reduction for Hand Motion Classification
The classification of upper-limb movements based on surface electromyography (EMG) signals is an important issue in the control of assistive devices and rehabilitation systems. Increasing the number of EMG channels and features in order to increase the number of control commands can yield a high dimensional feature vector. To cope with the accuracy and computation problems associated with high dimensionality, it is commonplace to apply a processing step that transforms the data to a space of significantly lower dimensions with only a limited loss of useful information. Linear discriminant analysis (LDA) has been successfully applied as an EMG feature projection method. Recently, a number of extended LDA-based algorithms have been proposed, which are more competitive in terms of both classification accuracy and computational costs/times with classical LDA. This paper presents the findings of a comparative study of classical LDA and five extended LDA methods. From a quantitative comparison based on seven multi-feature sets, three extended LDA-based algorithms, consisting of uncorrelated LDA, orthogonal LDA and orthogonal fuzzy neighborhood discriminant analysis, produce better class separability when compared with a baseline system (without feature projection), principle component analysis (PCA), and classical LDA. Based on a 7-dimension time domain and time-scale feature vectors, these methods achieved respectively 95.2% and 93.2% classification accuracy by using a linear discriminant classifier
Perception and cognition of cues Used in synchronous Brain–computer interfaces Modify electroencephalographic Patterns of control Tasks
A motor imagery (MI)-based brain–computer interface (BCI) is a system that enables humans to interact with their environment by translating their brain signals into control commands for a target device. In particular, synchronous BCI systems make use of cues to trigger the motor activity of interest. So far, it has been shown that electroencephalographic (EEG) patterns before and after cue onset can reveal the user cognitive state and enhance the discrimination of MI-related control tasks. However, there has been no detailed investigation of the nature of those EEG patterns. We, therefore, propose to study the cue effects on MI-related control tasks by selecting EEG patterns that best discriminate such control tasks, and analyzing where those patterns are coming from. The study was carried out using two methods: standard and all-embracing. The standard method was based on sources (recording sites, frequency bands, and time windows), where the modulation of EEG signals due to motor activity is typically detected. The all-embracing method included a wider variety of sources, where not only motor activity is reflected. The findings of this study showed that the classification accuracy (CA) of MI-related control tasks did not depend on the type of cue in use. However, EEG patterns that best differentiated those control tasks emerged from sources well defined by the perception and cognition of the cue in use. An implication of this study is the possibility of obtaining different control commands that could be detected with the same accuracy. Since different cues trigger control tasks that yield similar CAs, and those control tasks produce EEG patterns differentiated by the cue nature, this leads to accelerate the brain–computer communication by having a wider variety of detectable control commands. This is an important issue for Neuroergonomics research because neural activity could not only be used to monitor the human mental state as is typically done, but this activity might be also employed to control the system of interest
Expanding the clinical phenotype of IARS2-related mitochondrial disease.
BACKGROUND: IARS2 encodes a mitochondrial isoleucyl-tRNA synthetase, a highly conserved nuclear-encoded enzyme required for the charging of tRNAs with their cognate amino acid for translation. Recently, pathogenic IARS2 variants have been identified in a number of patients presenting broad clinical phenotypes with autosomal recessive inheritance. These phenotypes range from Leigh and West syndrome to a new syndrome abbreviated CAGSSS that is characterised by cataracts, growth hormone deficiency, sensory neuropathy, sensorineural hearing loss, and skeletal dysplasia, as well as cataract with no additional anomalies. METHODS: Genomic DNA from Iranian probands from two families with consanguineous parental background and overlapping CAGSSS features were subjected to exome sequencing and bioinformatics analysis. RESULTS: Exome sequencing and data analysis revealed a novel homozygous missense variant (c.2625C > T, p.Pro909Ser, NM_018060.3) within a 14.3 Mb run of homozygosity in proband 1 and a novel homozygous missense variant (c.2282A > G, p.His761Arg) residing in an ~ 8 Mb region of homozygosity in a proband of the second family. Patient-derived fibroblasts from proband 1 showed normal respiratory chain enzyme activity, as well as unchanged oxidative phosphorylation protein subunits and IARS2 levels. Homology modelling of the known and novel amino acid residue substitutions in IARS2 provided insight into the possible consequence of these variants on function and structure of the protein. CONCLUSIONS: This study further expands the phenotypic spectrum of IARS2 pathogenic variants to include two patients (patients 2 and 3) with cataract and skeletal dysplasia and no other features of CAGSSS to the possible presentation of the defects in IARS2. Additionally, this study suggests that adult patients with CAGSSS may manifest central adrenal insufficiency and type II esophageal achalasia and proposes that a variable sensorineural hearing loss onset, proportionate short stature, polyneuropathy, and mild dysmorphic features are possible, as seen in patient 1. Our findings support that even though biallelic IARS2 pathogenic variants can result in a distinctive, clinically recognisable phenotype in humans, it can also show a wide range of clinical presentation from severe pediatric neurological disorders of Leigh and West syndrome to both non-syndromic cataract and cataract accompanied by skeletal dysplasia
Bi-allelic variants in RNF170 are associated with hereditary spastic paraplegia.
Alterations of Ca2+ homeostasis have been implicated in a wide range of neurodegenerative diseases. Ca2+ efflux from the endoplasmic reticulum into the cytoplasm is controlled by binding of inositol 1,4,5-trisphosphate to its receptor. Activated inositol 1,4,5-trisphosphate receptors are then rapidly degraded by the endoplasmic reticulum-associated degradation pathway. Mutations in genes encoding the neuronal isoform of the inositol 1,4,5-trisphosphate receptor (ITPR1) and genes involved in inositol 1,4,5-trisphosphate receptor degradation (ERLIN1, ERLIN2) are known to cause hereditary spastic paraplegia (HSP) and cerebellar ataxia. We provide evidence that mutations in the ubiquitin E3 ligase gene RNF170, which targets inositol 1,4,5-trisphosphate receptors for degradation, are the likely cause of autosomal recessive HSP in four unrelated families and functionally evaluate the consequences of mutations in patient fibroblasts, mutant SH-SY5Y cells and by gene knockdown in zebrafish. Our findings highlight inositol 1,4,5-trisphosphate signaling as a candidate key pathway for hereditary spastic paraplegias and cerebellar ataxias and thus prioritize this pathway for therapeutic interventions
ERP detection based on smoothness priors
Objective: Detection of event-related potentials (ERPs) in electroencephalography (EEG) is of great interest in the study of brain responses to various stimuli. This is challenging due to the low signal-to-noise ratio of these deflections. To address this problem, a new scheme to detect the ERPs based on smoothness priors is proposed.
Methods: The problem is considered as a binary hypothesis test and solved using a smooth version of the generalized likelihood ratio test (SGLRT). First, we estimate the parameters of probability density functions from the training data under the Gaussian assumption. Then, these parameters are treated as known values and the unknown ERPs are estimated under the smoothness constraint. The performance of the proposed SGLRT is assessed for ERP detection in post-stimuli EEG recordings of two oddball settings. We compared our method with several powerful methods regarding ERP detection.
Results: The presented method performs better than the competing algorithms and improves the classification accuracy.
Conclusion: SGLRT can be employed as a powerful means for different ERP detection schemes. Significance: The proposed scheme is opening a new direction in ERP identification which provides better classification results compared to several popular ERP detection methods
Quantification of sEMG signals for automated muscle fatigue detection using nonlinear SVM
Fatigue is a multidimensional and subjective concept and is a complex phenomenon including various causes, mechanisms and forms of manifestation. Thus, it is crucial to delineate the different levels and to quantify selfperceived fatigue. The aim of this study was to introduce a method for automatic quantification and detection of muscle fatigue using surface EMG signals. Thus, sEMG signals from right sternocleidomastoid muscle of 9 healthy female subjects were recorded during neck flexion endurance test in Quaem hospital. Then six features in time, frequency and time- scale domains were extracted from signals. After dimensionality estimation and reduction, the SVM classifier was applied to the resulted feature vector. Then, the performance of linear SVM and nonlinear SVM with RBF kernel and the effect of show that the best accuracy is achieved using RBF kernel SVM with features using LLE criterion, were RMS, ZC and AIF. These results suggest that the selected features contained some information that could be used by nonlinear SVM with RBF kernel to best discriminate between fatigue and nonfatigue stages.
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