Expressing the tacit knowledge of a digital library system as linked data

Library organizations have enthusiastically undertaken semantic web initiatives and in particular the data publishing as linked data. Nevertheless, different surveys report the experimental nature of initiatives and the consumer difficulty in re-using data. These barriers are a hindrance for using linked datasets, as an infrastructure that enhances the library and related information services. This paper presents an approach for encoding, as a Linked Vocabulary, the "tacit" knowledge of the information system that manages the data source. The objective is the improvement of the interpretation process of the linked data meaning of published datasets. We analyzed a digital library system, as a case study, for prototyping the "semantic data management" method, where data and its knowledge are natively managed, taking into account the linked data pillars. The ultimate objective of the semantic data management is to curate the correct consumers' interpretation of data, and to facilitate the proper re-use. The prototype defines the ontological entities representing the knowledge, of the digital library system, that is not stored in the data source, nor in the existing ontologies related to the system's semantics. Thus we present the local ontology and its matching with existing ontologies, Preservation Metadata Implementation Strategies (PREMIS) and Metadata Objects Description Schema (MODS), and we discuss linked data triples prototyped from the legacy relational database, by using the local ontology. We show how the semantic data management, can deal with the inconsistency of system data, and we conclude that a specific change in the system developer mindset, it is necessary for extracting and "codifying" the tacit knowledge, which is necessary to improve the data interpretation process

Root seasonal pattern, spatial distribution, and C:N ratio of matgrasspasture (Nardus stricta L.) in the Lombardy Prealps

The aim of the present study was to investigate carbon and nutrient cycling and the role of root dynamics in terrestrial ecosystems such as large abandoned pastures and natural grasslands present in the Prealps, for which below-ground processes are currently enigmatic. In particular, we quantified root/leaf biomass and C:N ratio throughout two growing seasons. Additionally, root traits such as root length density (RLD), root mass density (RMD), and root diameter classes (RDC) were also investigated with the aim of understanding the spatial distribution of roots in the soil. In our samples, we found that the roots could be divided into three main diameter classes and hence quantified the presence of each class along the soil profile. With regard to total root biomass, we found the occurrence of two peaks of biomass accumulation during the growth season, and when biomass accumulation was compared with climatic data, it was impossible to obtain a clear indication of the root turnover rate. In fact, the strong influence of grazing on the above-ground biomass could have affected, in turn, root biomass. In future, this possible complication will be avoided by repeating the measurements within enclosures to avoid grazing interference. We found that C:N ratio remained constant, with a single peak, suggesting a lower root decomposition during the warmest period (August 2006). The concentration of nitrogen in roots decreased with depth as a result of a decrease in roots with smaller diameters. The reverse was found for carbon content, which increased with depth, probably due to an increase in roots with larger diameters. This study represents the first attempt to estimate root turnover rates in this prealpine ecosystem, which have been analysed to date only for the above-ground biomass

Oral health of elite athletes and association with performance: a systematic review.

We aimed to systematically review the epidemiology of oral disease and trauma in the elite athlete population and to investigate the impact of oral health on sporting performance

Fine-root carbon and nitrogen concentration of European beech (Fagus sylvatica L.) in Italy Prealps: possible implications of coppice conversion to high forest

Fine-root systems represent a very sensitive plant compartment to environmental changes. Gaining further knowledge about their dynamics would improve soil carbon input understanding. This paper investigates C and N concentrations in fine roots in relation to different stand characteristics resulting from conversion of coppiced forests to high forests. In order to evaluate possible interferences due to different vegetative stages of vegetation, fine-root sampling was repeated six times in each stand during the same 2008 growing season. Fine-root sampling was conducted within three different soil depths (0-10; 10-20; and 20-30 cm). Fine-root traits were measured by means of WinRHIZO software which enable us to separate them into three different diameter classes (0-0.5, 0.5-1.0 and 1.0-2.0 mm). The data collected indicate that N concentration was higher in converted stands than in the coppiced stand whereas C concentration was higher in the coppiced stand than in converted stands. Consequently the fine-root C:N ratio was significantly higher in coppiced than in converted stands and showed an inverse relationship with fine-root turnover rate, confirming a significant change of fine-root status after the conversion of a coppice to high forest

Fine-root seasonal pattern, production and turnover rate of European beech (Fagus sylvatica L.) stands in Italy Prealps: Possible implications of coppice conversion to high forest

The aim of this study was to investigate the possible effects of coppice conversion to high forest on the beech fine-root systems. We compared the seasonal pattern of live and dead fine-root mass (d<2 mm), production and turnover in three beech stands that differed in management practices. Tree density was higher in the 40-year-old coppice stand than in the stands that were converted from coppice to high forest in 1994 and 2004, respectively. We found that a reduction in tree density reduced the total fine-root biomass (Coppice stand, 353.8 g m-2; Conversion 1994 stand, 203.6 g m-2; Conversion 2004 stand, 176.2 g m-2) which continued to be characterised by a bimodal pattern with two major peaks, one in spring and one in early fall. Conversion to high forest may also affect the fine-root soil depth distribution. Both fine-root production and turnover rate were sensitive to management practices. They were lower in the Coppice stand (production 131.5 g m-2 year-1; turnover rate 0.41 year-1) than in the converted stands (1994 Conversion stand: production 232 g m-2 year-1, turnover rate 1.06 year-1; 2004 Conversion stand: production 164.2 g m-2 year-1, turnover rate 0.79 year-1)

Effect of tree density on root distribution in Fagus sylvatica stands: a semi-automatic digitising device approach to trench wall method

5Knowledge of root profiles is essential for measuring and predicting ecosystem dynamics and function. In the present study, the effects of management practices on root (0.5 <= ø < 20 mm) spatial distribution were examined in a 40-year-old coppice stand (CpS 1968) and other two stands converted from coppice to thinned high forest in 1994 (CvS 1994) and 2004 (CvS 2004), respectively. The use of a semi-automatic digitising device approach was compared with a conventional root mapping method in order to estimate the time per person required from fieldwork to the final digital map. In July 2009, six trench walls per stand were established according to tree density, i.e. as equidistant as possible from all surrounding trees. Findings highlighted differences between the stands with CvS 1994 showing a lower number of small roots (2 <= ø < 5 mm), a higher mean cross-sectional area (CSA) of coarse roots (5 <= ø < 20 mm) and different root depth distribution as compared to CpS 1968 and CvS 2004 whose values were close to each other. The three diameter classes selected in this study showed significant relationships in terms of number of roots, scaling down from coarse- to small- and fine-roots. Forest management practices significantly affected only the number of small roots. The number of fine roots (0.5 <= ø < 2 mm) was isometrically related to their root length density (RLD, cm cm-3). No relationship occurred with RLD of very fine roots (ø < 0.5 mm). In conclusion, forest management practices in terms of conversion thinnings significantly affected belowground biomass distribution of beech forest in space and time. In particular, frequency of coarse roots was related to the stand tree density, frequency of small roots was related to the cutting age. Size of coarse roots was related to tree density but only several years after felling. The allometric relationship occurring between fineand small-roots highlighted how fine root number and RLD were only indirectly affected by forest management practices. These findings suggest that future investigations on the effect of forest thinning practices on fine-root traits like number, length and biomass several years after felling cannot ignore those on small roots.openDi Iorio, A.; Montagnoli, A.; Terzaghi, M.; Scippa, G.S.; Chiatante, D.DI IORIO, Antonino; Montagnoli, A.; Terzaghi, M.; Scippa, G. S.; Chiatante, Donat

Influence of soil temperature and water content on fine-root seasonal growth of European beech natural forest in Southern Alps, Italy

In tree species, fine-root growth is influenced by the interaction between environmental factors such as soil temperature (ST) and soil moisture. Evidences suggest that if soil moisture and nutrient availability are adequate, rates of root growth increase with increasing soil temperature up to an optimum and then decline at supraoptimal temperatures. These optimal conditions vary between different taxa, the native environment and the fine-root diameter sub-classes considered. We investigated the effects of seasonal changes of both ST and soil water content (SWC) on very fine (d < 0.5 mm) and fine-root (0.5 < d < 2 mm) mass (vFRM, FRM) and length (vFRL, FRL) in Italian Southern Alps beech forests (Fagus sylvatica L.). Root samples were collected by soil core method. Turnover rate was higher for the very fine (0.51) than for the fine (0.36) roots. vFRM, FRM, vFRL and FRL displayed a complex seasonal pattern peaking in summer when SWC was around 40 % and ST was around 14 \ub0C. Above this temperature, under almost constant SWC, all above mentioned root traits decreased. vFRM, FRM, vFRL and FRL showed significant second-order polynomial relationship (p < 0.05) with SWC for both diameter classes, with the only exception of SRL. ST showed the same kind of relationship significant only with vFRM and vFRL, the latter within the 12-16 \ub0C smaller range. Interpolation analysis between root mass and length for both diameter classes and investigated soil environmental characteristics (ST and SWC) showed a clear roundish delineation only for vFRM. In conclusion, these findings clarified the occurrence of a bimodal fine-root growth seasonal pattern for our beech forest. The optimal growth ST and SWC ranges were delineated only for very fine roots, giving further evidence on this root category as the more responsiveness to soil environmental changes. Furthermore, F. sylvatica seems to adopt an intensive strategy to cope with decreasing SWC. Finally, fine-root growth, mainly radial type, seems to be driven by SWC, whereas very fine-root growth, mainly longitudinal type, seems to be driven by ST

Poplar woody root proteome during the transition dormancy-active growth

Woody plants living in temperate climates finely regulate their growth and development in relation to seasonal changes; their transition from vegetative to dormancy phase represents an adaptation to their environment. Events occurring in the shoot during onset/release from dormancy have been largely investigated, whereas in woody roots they remain completely unknown. In recent years, we have been interested in understanding the molecular and physiological events occurring in poplar woody root during release from dormancy. Here, we propose the results of a comparative analysis of the proteome of poplar woody root sampled at different time points: T0 (dormancy condition), T1 (release from dormancy), and T2 (full vegetative condition). This study identified proteins that may be involved in the long-term survival of a dormant root or landmarking a specific time point

Spectrally resolved observations of atmospheric emitted radiance in the H2O rotation band

This paper presents the project Earth Cooling by Water Vapor Radiation, an observational programme, which aims at developing a database of spectrally resolved far infrared observations, in atmospheric dry conditions, in order to validate radiative transfer models and test the quality of water vapor continuum and line parameters. The project provides the very first set of far-infrared spectral downwelling radiance measurements, in dry atmospheric conditions, which are complemented with Raman Lidar-derived temperature and water vapor profiles

An extracellular transglutaminase is required for apple pollen tube growth

An extracellular form of the calcium-dependent protein-crosslinking enzyme TGase (transglutaminase) was demonstrated to be involved in the apical growth of Malus domestica pollen tube. Apple pollen TGase and its substrates were co-localized within aggregates on the pollen tube surface, as determined by indirect immunofluorescence staining and the in situ cross-linking of fluorescently labelled substrates. TGase-specific inhibitors and an anti-TGase monoclonal antibody blocked pollen tube growth, whereas incorporation of a recombinant fluorescent mammalian TGase substrate (histidine-tagged green fluorescent protein:His6– Xpr–GFP) into the growing tube wall enhanced tube length and germination, consistent with a role of TGase as a modulator of cell wall building and strengthening. The secreted pollen TGase catalysed the cross-linking of both PAs (polyamines) into proteins (released by the pollen tube) and His6-Xpr-GFP into endogenous or exogenously added substrates. A similar distribution of TGase activitywas observed in planta on pollen tubes germinating inside the style, consistent with a possible additional role for TGase in the interaction between the pollen tube and the style during fertilization