Parallel Batch-Dynamic Graph Connectivity

In this paper, we study batch parallel algorithms for the dynamic connectivity problem, a fundamental problem that has received considerable attention in the sequential setting. The most well known sequential algorithm for dynamic connectivity is the elegant level-set algorithm of Holm, de Lichtenberg and Thorup (HDT), which achieves $O(\log^2 n)$ amortized time per edge insertion or deletion, and $O(\log n / \log\log n)$ time per query. We design a parallel batch-dynamic connectivity algorithm that is work-efficient with respect to the HDT algorithm for small batch sizes, and is asymptotically faster when the average batch size is sufficiently large. Given a sequence of batched updates, where $\Delta$ is the average batch size of all deletions, our algorithm achieves $O(\log n \log(1 + n / \Delta))$ expected amortized work per edge insertion and deletion and $O(\log^3 n)$ depth w.h.p. Our algorithm answers a batch of $k$ connectivity queries in $O(k \log(1 + n/k))$ expected work and $O(\log n)$ depth w.h.p. To the best of our knowledge, our algorithm is the first parallel batch-dynamic algorithm for connectivity.Comment: This is the full version of the paper appearing in the ACM Symposium on Parallelism in Algorithms and Architectures (SPAA), 201

Quark-Hadron Phase Transitions in Viscous Early Universe

Based on hot big bang theory, the cosmological matter is conjectured to undergo QCD phase transition(s) to hadrons, when the universe was about $1-10 \mu$s old. In the present work, we study the quark-hadron phase transition, by taking into account the effect of the bulk viscosity. We analyze the evolution of the quantities relevant for the physical description of the early universe, namely, the energy density $\rho$, temperature $T$, Hubble parameter $H$ and scale factor $a$ before, during and after the phase transition. To study the cosmological dynamics and the time evolution we use both analytical and numerical methods. By assuming that the phase transition may be described by an effective nucleation theory (prompt {\it first-order} phase transition), we also consider the case where the universe evolved through a mixed phase with a small initial supercooling and monotonically growing hadronic bubbles. The numerical estimation of the cosmological parameters, $a$ and $H$ for instance, makes it clear that the time evolution varies from phase to phase. As the QCD era turns to be fairly accessible in the high-energy experiments and the lattice QCD simulations, the QCD equation of state is very well defined. In light of this, we introduce a systematic study of the {\it cross-over} quark-hadron phase transition and an estimation for the time evolution of Hubble parameter.Comment: 27 pages, 17 figures, revtex style (To appear in Phys. Rev. D). arXiv admin note: text overlap with arXiv:gr-qc/040404

Distribution of occupation numbers in finite Fermi-systems and role of interaction in chaos and thermalization

New method is developed for calculation of single-particle occupation numbers in finite Fermi systems of interacting particles. It is more accurate than the canonical distribution method and gives the Fermi-Dirac distribution in the limit of large number of particles. It is shown that statistical effects of the interaction are absorbed by an increase of the effective temperature. Criteria for quantum chaos and statistical equilibrium are considered. All results are confirmed by numerical experiments in the two-body random interaction model.Comment: 4 pages, Latex, 4 figures in the form of PS-file

BLITZEN: A highly integrated massively parallel machine

The architecture and VLSI design of a new massively parallel processing array chip are described. The BLITZEN processing element array chip, which contains 1.1 million transistors, serves as the basis for a highly integrated, miniaturized, high-performance, massively parallel machine that is currently under development. Each processing element has 1K bits of static RAM and performs bit-serial processing with functional elements for arithmetic, logic, and shifting

Generalized Kinetic Theory of Electrons and Phonons: Models, Equilibrium, Stability

In the present paper our aim is to introduce some models for the generalization of the kinetic theory of electrons and phonons (KTEP), as well as to study equilibrium solutions and their stability for the generalized KTEP (GKTEP) equations. We consider a couple of models, relevant to non standard quantum statistics, which give rise to inverse power law decays of the distribution function with respect to energy. In the case of electrons in a phonon background, equilibrium and stability are investigated by means of Lyapounov theory. Connections with thermodynamics are pointed out.Comment: 10 pages, 2 figures, (RevTeX4), to appear in Physica B (2003

Reciprocity relations between ordinary temperature and the Frieden-Soffer's Fisher-temperature

Frieden and Soffer conjectured some years ago the existence of a ``Fisher temperature" T_F that would play, with regards to Fisher's information measure I, the same role that the ordinary temperature T plays vis-a-vis Shannon's logarithmic measure. Here we exhibit the existence of reciprocity relations between T_F and T and provide an interpretation with reference to the meaning of T_F for the canonical ensemble.Comment: 3 pages, no figure

Radial Spin Helix in Two-Dimensional Electron Systems with Rashba Spin-Orbit Coupling

We suggest a long-lived spin polarization structure, a radial spin helix, and study its relaxation dynamics. For this purpose, starting with a simple and physically clear consideration of spin transport, we derive a system of equations for spin polarization density and find its general solution in the axially symmetric case. It is demonstrated that the radial spin helix of a certain period relaxes slower than homogeneous spin polarization and plain spin helix. Importantly, the spin polarization at the center of the radial spin helix stays almost unchanged at short times. At longer times, when the initial non-exponential relaxation region ends, the relaxation of the radial spin helix occurs with the same time constant as that describing the relaxation of the plain spin helix.Comment: 9 pages, 7 figure

Phase transition from quark-meson coupling hyperonic matter to deconfined quark matter

We investigate the possibility and consequences of phase transitions from an equation of state (EOS) describing nucleons and hyperons interacting via mean fields of sigma, omega, and rho mesons in the recently improved quark-meson coupling (QMC) model to an EOS describing a Fermi gas of quarks in an MIT bag. The transition to a mixed phase of baryons and deconfined quarks, and subsequently to a pure deconfined quark phase, is described using the method of Glendenning. The overall EOS for the three phases is calculated for various scenarios and used to calculate stellar solutions using the Tolman-Oppenheimer-Volkoff equations. The results are compared with recent experimental data, and the validity of each case is discussed with consequences for determining the species content of the interior of neutron stars.Comment: 12 pages, 14 figures; minor typos correcte

Carboplatin/taxane-induced gastrointestinal toxicity: a pharmacogenomics study on the SCOTROC1 trial

Carboplatin/taxane combination is first-line therapy for ovarian cancer. However, patients can encounter treatment delays, impaired quality of life, even death because of chemotherapy-induced gastrointestinal (GI) toxicity. A candidate gene study was conducted to assess potential association of genetic variants with GI toxicity in 808 patients who received carboplatin/taxane in the Scottish Randomized Trial in Ovarian Cancer 1 (SCOTROC1). Patients were randomized into discovery and validation cohorts consisting of 404 patients each. Clinical covariates and genetic variants associated with grade III/IV GI toxicity in discovery cohort were evaluated in replication cohort. Chemotherapy-induced GI toxicity was significantly associated with seven single-nucleotide polymorphisms in the ATP7B, GSR, VEGFA and SCN10A genes. Patients with risk genotypes were at 1.53 to 18.01 higher odds to develop carboplatin/taxane-induced GI toxicity (P<0.01). Variants in the VEGF gene were marginally associated with survival time. Our data provide potential targets for modulation/inhibition of GI toxicity in ovarian cancer patients

An evaluation of two distributed deployment algorithms for Mobile Wireless Sensor Networks

Deployment is important in large wireless sensor networks (WSN), specially because nodes may fall due to failure or battery issues. Mobile WSN cope with deployment and reconfiguration at the same time: nodes may move autonomously: i) to achieve a good area coverage; and ii) to distribute as homogeneously as possible. Optimal distribution is computationally expensive and implies high tra c load, so local, distributed approaches may be preferable. This paper presents an experimental evaluation of role-based and behavior based ones. Results show that the later are better, specially for a large number of nodes in areas with obstacles.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech