The long reach of DNA sequence heterogeneity in diffusive processes

Many biological processes involve one dimensional diffusion over a correlated inhomogeneous energy landscape with a correlation length $\xi_c$. Typical examples are specific protein target location on DNA, nucleosome repositioning, or DNA translocation through a nanopore, in all cases with $\xi_c\approx$ 10 nm. We investigate such transport processes by the mean first passage time (MFPT) formalism, and find diffusion times which exhibit strong sample to sample fluctuations. For a a displacement $N$, the average MFPT is diffusive, while its standard deviation over the ensemble of energy profiles scales as $N^{3/2}$ with a large prefactor. Fluctuations are thus dominant for displacements smaller than a characteristic $N_c \gg \xi_c$: typical values are much less than the mean, and governed by an anomalous diffusion rule. Potential biological consequences of such random walks, composed of rapid scans in the vicinity of favorable energy valleys and occasional jumps to further valleys, is discussed

Estimates for practical quantum cryptography

In this article I present a protocol for quantum cryptography which is secure against attacks on individual signals. It is based on the Bennett-Brassard protocol of 1984 (BB84). The security proof is complete as far as the use of single photons as signal states is concerned. Emphasis is given to the practicability of the resulting protocol. For each run of the quantum key distribution the security statement gives the probability of a successful key generation and the probability for an eavesdropper's knowledge, measured as change in Shannon entropy, to be below a specified maximal value.Comment: Authentication scheme corrected. Other improvements of presentatio

A simple high-sensitivity technique for purity analysis of xenon gas

We report on the development and performance of a high-sensitivity purity-analysis technique for gaseous xenon. The gas is sampled at macroscopic pressure from the system of interest using a UHV leak valve. The xenon present in the sample is removed with a liquid-nitrogen cold trap, and the remaining impurities are observed with a standard vacuum mass-spectroscopy device. Using calibrated samples of xenon gas spiked with known levels of impurities, we find that the minimum detectable levels of N2, O2, and methane are 1 ppb, 160 ppt, and 60 ppt respectively. This represents an improvement of about a factor of 10,000 compared to measurements performed without a coldtrap.Comment: 20 pages, 5 figure

Study of a zirconium getter for purification of xenon gas

Oxygen, nitrogen and methane purification efficiencies for a common zirconium getter are measured in 1050 Torr of xenon gas. Starting with impurity concentrations near 10^{-6} g/g, the outlet impurity level is found to be less than 120*10^{-12} g/g for O2 and less than 950*10^{-12} g/g for N2. For methane we find residual contamination of the purified gas at concentrations varying over three orders of magnitude, depending on the purifier temperature and the gas flow rate. A slight reduction in the purifier's methane efficiency is observed after 13 mg of this impurity has been absorbed, which we attribute to partial exhaustion of the purifier's capacity for this species. We also find that the purifier's ability to absorb N2 and methane can be extinguished long before any decrease in O2 performance is observed, and slower flow rates should be employed for xenon purification due to the cooling effect that the heavy gas has on the getter.Comment: 14 pages, 5 figure

A Xenon Condenser with a Remote Liquid Storage Vessel

We describe the design and operation of a system for xenon liquefaction in which the condenser is separated from the liquid storage vessel. The condenser is cooled by a pulse tube cryocooler, while the vessel is cooled only by the liquid xenon itself. This arrangement facilitates liquid particle detector research by allowing easy access to the upper and lower flanges of the vessel. We find that an external xenon gas pump is useful for increasing the rate at which cooling power is delivered to the vessel, and we present measurements of the power and efficiency of the apparatus.Comment: 22 pages, 7 figures Corrected typos in authors lis

A prototype vector magnetic field monitoring system for a neutron electric dipole moment experiment

We present results from a first demonstration of a magnetic field monitoring system for a neutron electric dipole moment experiment. The system is designed to reconstruct the vector components of the magnetic field in the interior measurement region solely from exterior measurements

Security against individual attacks for realistic quantum key distribution

I prove the security of quantum key distribution against individual attacks for realistic signals sources, including weak coherent pulses and downconversion sources. The proof applies to the BB84 protocol with the standard detection scheme (no strong reference pulse). I obtain a formula for the secure bit rate per time slot of an experimental setup which can be used to optimize the performance of existing schemes for the considered scenario.Comment: 10 pages, 4 figure

GEO 600 and the GEO-HF upgrade program: successes and challenges

The German-British laser-interferometric gravitational wave detector GEO 600 is in its 14th year of operation since its first lock in 2001. After GEO 600 participated in science runs with other first-generation detectors, a program known as GEO-HF began in 2009. The goal was to improve the detector sensitivity at high frequencies, around 1 kHz and above, with technologically advanced yet minimally invasive upgrades. Simultaneously, the detector would record science quality data in between commissioning activities. As of early 2014, all of the planned upgrades have been carried out and sensitivity improvements of up to a factor of four at the high-frequency end of the observation band have been achieved. Besides science data collection, an experimental program is ongoing with the goal to further improve the sensitivity and evaluate future detector technologies. We summarize the results of the GEO-HF program to date and discuss its successes and challenges

Enhanced reaction kinetics in biological cells

The cell cytoskeleton is a striking example of "active" medium driven out-of-equilibrium by ATP hydrolysis. Such activity has been shown recently to have a spectacular impact on the mechanical and rheological properties of the cellular medium, as well as on its transport properties : a generic tracer particle freely diffuses as in a standard equilibrium medium, but also intermittently binds with random interaction times to motor proteins, which perform active ballistic excursions along cytoskeletal filaments. Here, we propose for the first time an analytical model of transport limited reactions in active media, and show quantitatively how active transport can enhance reactivity for large enough tracers like vesicles. We derive analytically the average interaction time with motor proteins which optimizes the reaction rate, and reveal remarkable universal features of the optimal configuration. We discuss why active transport may be beneficial in various biological examples: cell cytoskeleton, membranes and lamellipodia, and tubular structures like axons.Comment: 10 pages, 2 figure