Phase reduction of stochastic limit cycle oscillators

We point out that the phase reduction of stochastic limit cycle oscillators has been done incorrectly in the literature. We present a correct phase reduction method for oscillators driven by weak external white Gaussian noises. Numerical evidence demonstrates that the present phase equation properly approximates the dynamics of the original full oscillator system.Comment: 4 pages, 2 figure

A new method of creating high intensity neutron source

We propose a new scheme of producing intense neutron beam whose yields exceed those of existing facilities by many orders of magnitude. This scheme uses the recently proposed photon beam extracted from circulating quantum ions, which is directed to a deuteron target for photo-disintegration. The calculated neutron energy spectrum is nearly flat down to neV range, except a threshold rise and its adjacent wide structure. Hence, there exists a possibility of directly using sub-eV neutrons without a moderator. We shall have brief comments on promising particle physics applications using this large yield of neutron.Comment: A bug in numerical computation is corrected. 9 pages, 5 figure

Parity violating observables in radiative neutrino pair emission from metastable atoms

We report on a possibility of measuring parity violating effects in radiative neutrino pair emission from metastable atoms; asymmetric angular distribution of emitted photons from oriented atoms and emergent circular polarization. Their observation, along with the continuous photon energy spectrum which has 6 thresholds, may be interpreted as events being a combined weak and QED process, emission of $\gamma \nu_i \nu_j$ in the final state. The method may greatly help to perform neutrino mass spectroscopy using atoms, a systematic determination of the neutrino mass matrix.Comment: 9 pages, 4 figure

Specific Rab GTPase-activating proteins define the Shiga toxin and epidermal growth factor uptake pathways

Rab family guanosine triphosphatases (GTPases) together with their regulators define specific pathways of membrane traffic within eukaryotic cells. In this study, we have investigated which Rab GTPase-activating proteins (GAPs) can interfere with the trafficking of Shiga toxin from the cell surface to the Golgi apparatus and studied transport of the epidermal growth factor (EGF) from the cell surface to endosomes. This screen identifies 6 (EVI5, RN-tre/USP6NL, TBC1D10A–C, and TBC1D17) of 39 predicted human Rab GAPs as specific regulators of Shiga toxin but not EGF uptake. We show that Rab43 is the target of RN-tre and is required for Shiga toxin uptake. In contrast, RabGAP-5, a Rab5 GAP, was unique among the GAPs tested and reduced the uptake of EGF but not Shiga toxin. These results suggest that Shiga toxin trafficking to the Golgi is a multistep process controlled by several Rab GAPs and their target Rabs and that this process is discrete from ligand-induced EGF receptor trafficking

Quantum System under Periodic Perturbation: Effect of Environment

In many physical situations the behavior of a quantum system is affected by interaction with a larger environment. We develop, using the method of influence functional, how to deduce the density matrix of the quantum system incorporating the effect of environment. After introducing characterization of the environment by spectral weight, we first devise schemes to approximate the spectral weight, and then a perturbation method in field theory models, in order to approximately describe the environment. All of these approximate models may be classified as extended Ohmic models of dissipation whose differences are in the high frequency part. The quantum system we deal with in the present work is a general class of harmonic oscillators with arbitrary time dependent frequency. The late time behavior of the system is well described by an approximation that employs a localized friction in the dissipative part of the correlation function appearing in the influence functional. The density matrix of the quantum system is then determined in terms of a single classical solution obtained with the time dependent frequency. With this one can compute the entropy, the energy distribution function, and other physical quantities of the system in a closed form. Specific application is made to the case of periodically varying frequency. This dynamical system has a remarkable property when the environmental interaction is switched off: Effect of the parametric resonance gives rise to an exponential growth of the populated number in higher excitation levels, or particle production in field theory models. The effect of the environment is investigated for this dynamical system and it is demonstrated that there existsComment: 55 pages, LATEX file plus 13 PS figures. A few calculational mistatkes and corresponding figure 1 in field theory model corrected and some changes made for publication in Phys. Rev.D (in press

Dynamics of Limit Cycle Oscillator Subject to General Noise

The phase description is a powerful tool for analyzing noisy limit cycle oscillators. The method, however, has found only limited applications so far, because the present theory is applicable only to the Gaussian noise while noise in the real world often has non-Gaussian statistics. Here, we provide the phase reduction for limit cycle oscillators subject to general, colored and non-Gaussian, noise including heavy-tailed noise. We derive quantifiers like mean frequency, diffusion constant, and the Lyapunov exponent to confirm consistency of the result. Applying our results, we additionally study a resonance between the phase and noise.Comment: main paper: 4 pages, 2 figure; auxiliary material: 5-7 pages of the document, 1 figur

Identification and Mapping of a Gene for Rice Slender Kernel Using Oryza Glumaepatula Introgression Lines

World demand for superior rice grain quality tends to increase. One of the criteria of appearance quality of rice grain is grain shape. Rice consumers exhibit wide preferences for grain shape, but most Indonesian rice consumers prefer long and slender grain. The objectives of this study were to identify and map a gene for rice slender kernel trait using Oryza glumaepatula introgression lines with O. sativa cv. Taichung 65 genetic background. A segregation analysis of BC4F2 population derived from backcrosses of a donor parent O. glumaepatula into a recurrent parent Taichung 65 showed that the slender kernel was controlled by a single recessive gene. This new identified gene was designated as sk1 (slender kernel 1). Moreover, based on the RFLP analyses using 14 RFLP markers located on chromosomes 2, 8, 9, and 10 in which the O. glumaepatula chromosomal segments were retained in BC4F2 population, the sk1 was located between RFLP markers C679 and C560 on the long arm of chromosome 2, with map distances of 2.8 and 1.5 cM, respectively. The wild rice O. glumaepatula carried a recessive allele for slender kernel. This allele may be useful in breeding of rice with slender kernel types. In addition, the development of plant materials and RFLP map associated with slender kernel in this study is the preliminary works in the effort to isolate this important grain shape gene