A study of localization metrics: Evaluation of position errors in wireless sensor networks

Cataloged from PDF version of article.For wireless sensor network applications that require location information for sensor nodes, locations of nodes can be estimated by a number of localization algorithms, which inevitably may introduce various types of errors in their estimations. How an application is affected from errors and a location error metric’s response to errors may depend on the error characteristics. Therefore it is important to use the right error metric to evaluate the error performance of alternative localization techniques that is possible to use for an application. To date, unfortunately, only simplistic error metrics that depend on the Euclidean distance between an actual node position and its estimate in isolation to the rest of the network has been considered for evaluation of localization algorithms. In this paper, we first clarify the problem with this traditional approach and then propose some alternative and new metrics that consider an overall network topology and its estimate in computing a metric value. We compared the existing and new metrics via simulation experiments done using some typical application and error scenarios, and observed that some new metrics are more sensitive to some type of errors and therefore can distinguish better among alternative localization algorithms for applications that are more sensitive to those types of errors. We also go through a case study with some localization algorithms from literature to give an idea about the practical use of our approach. Finally, we provide a step-by-step guideline for selecting the best metric to use for a given sensor network application.(C)2011 Elsevier B.V. All rights reserved

Unsupervised detection and localization of structural textures using projection profiles

Cataloged from PDF version of article.The main goal of existing approaches for structural texture analysis has been the identification of repeating texture primitives and their placement patterns in images containing a single type of texture. We describe a novel unsupervised method for simultaneous detection and localization of multiple structural texture areas along with estimates of their orientations and scales in real images. First, multi-scale isotropic filters are used to enhance the potential texton locations. Then, regularity of the textons is quantified in terms of the periodicity of projection profiles of filter responses within sliding windows at multiple orientations. Next, a regularity index is computed for each pixel as the maximum regularity score together with its orientation and scale. Finally, thresholding of this regularity index produces accurate localization of structural textures in images containing different kinds of textures as well as non-textured areas. Experiments using three different data sets show the effectiveness of the proposed method in complex scenes.(C)2010 Elsevier Ltd. All rights reserved

Automatic detection and segmentation of orchards using very high-resolution imagery

Cataloged from PDF version of article.Spectral information alone is often not sufficient to distinguish certain terrain classes such as permanent crops like orchards, vineyards, and olive groves from other types of vegetation. However, instances of these classes possess distinctive spatial structures that can be observable in detail in very high spatial resolution images. This paper proposes a novel unsupervised algorithm for the detection and segmentation of orchards. The detection step uses a texture model that is based on the idea that textures are made up of primitives (trees) appearing in a near-regular repetitive arrangement (planting patterns). The algorithm starts with the enhancement of potential tree locations by using multi-granularity isotropic filters. Then, the regularity of the planting patterns is quantified using projection profiles of the filter responses at multiple orientations. The result is a regularity score at each pixel for each granularity and orientation. Finally, the segmentation step iteratively merges neighboring pixels and regions belonging to similar planting patterns according to the similarities of their regularity scores and obtains the boundaries of individual orchards along with estimates of their granularities and orientations. Extensive experiments using Ikonos and QuickBird imagery as well as images taken from Google Earth show that the proposed algorithm provides good localization of the target objects even when no sharp boundaries exist in the image data. © 2012 IEEE

Incorporating scale dependence in disease burden estimates:the case of human African trypanosomiasis in Uganda

The WHO has established the disability-adjusted life year (DALY) as a metric for measuring the burden of human disease and injury globally. However, most DALY estimates have been calculated as national totals. We mapped spatial variation in the burden of human African trypanosomiasis (HAT) in Uganda for the years 2000-2009. This represents the first geographically delimited estimation of HAT disease burden at the sub-country scale.Disability-adjusted life-year (DALY) totals for HAT were estimated based on modelled age and mortality distributions, mapped using Geographic Information Systems (GIS) software, and summarised by parish and district. While the national total burden of HAT is low relative to other conditions, high-impact districts in Uganda had DALY rates comparable to the national burden rates for major infectious diseases. The calculated average national DALY rate for 2000-2009 was 486.3 DALYs/100 000 persons/year, whereas three districts afflicted by rhodesiense HAT in southeastern Uganda had burden rates above 5000 DALYs/100 000 persons/year, comparable to national GBD 2004 average burden rates for malaria and HIV/AIDS.These results provide updated and improved estimates of HAT burden across Uganda, taking into account sensitivity to under-reporting. Our results highlight the critical importance of spatial scale in disease burden analyses. National aggregations of disease burden have resulted in an implied bias against highly focal diseases for which geographically targeted interventions may be feasible and cost-effective. This has significant implications for the use of DALY estimates to prioritize disease interventions and inform cost-benefit analyses

The COST292 experimental framework for TRECVID 2007

In this paper, we give an overview of the four tasks submitted to TRECVID 2007 by COST292. In shot boundary (SB) detection task, four SB detectors have been developed and the results are merged using two merging algorithms. The framework developed for the high-level feature extraction task comprises four systems. The first system transforms a set of low-level descriptors into the semantic space using Latent Semantic Analysis and utilises neural networks for feature detection. The second system uses a Bayesian classifier trained with a “bag of subregions”. The third system uses a multi-modal classifier based on SVMs and several descriptors. The fourth system uses two image classifiers based on ant colony optimisation and particle swarm optimisation respectively. The system submitted to the search task is an interactive retrieval application combining retrieval functionalities in various modalities with a user interface supporting automatic and interactive search over all queries submitted. Finally, the rushes task submission is based on a video summarisation and browsing system comprising two different interest curve algorithms and three features

The effect of Melissa officinalis on diet-induced hyperlipidemia, hypercholesterolemia, oxidative stress and inflammation

The Lamiaceae family is an essential medicinal plant family. Melissa officinalis L. is a well-known medicinal plant of Lamiaceae. It was aimed to investigate the effects of Melissa officinalis infusion given to rats with hyperlipidemia and hypercholesterolemia in this study. It is seen that the high-fat diet (HFD) group causes weight gain from the third week. VLDL, LDL, HDL and cholesterol levels were found statistically significant differences (p˂0.05), fed a cholesterol-enriched high-fat diet group (HFD) compared to the control. It is seen that the cholesterol level of the high-fat diet+Melissa officinalis infusion (HFD+MOI) group was statistically significantly (p˂0.05).  lower than the HFD group. In addition, the group in which Melissa officinalis was applied had positive effects on the antioxidant system and reduced the total oxidant system. The fact that the IFN-γ level of the HFD group was higher than the control indicates that the diet may have an inflammatory effect. As a result, HFD application with cholesterol caused hyperlipidemia and hypercholesterolemia in rats. The cholesterol-lowering effect of Melissa officinalis is observed. Remarkably, Melissa officinalis did not alter serum calcium levels while lowering cholesterol. In addition, it can said that HFD has a strengthening effect on the antioxidant system on oxidative stress

Molecular studies involved in biotic stress responses in potato

30th International Horticultural Congress (IHC) / 2nd International Symposium on Root and Tuber Crops - Value Added Crops for the Next Generation -- AUG 12-16, 2018 -- Istanbul, TURKEYPotato (Solanum tuberosum L.) is the fourth significant and the most consumed staple crop after rice, wheat and corn in the world. It is known that several biotic stresses cause reduction in worldwide potato yields, which in turn, leads to a significant economic loss. In biotic stress response, potato plants have developed a wide range of defense and damage-delimiting mechanisms. Morphological, biochemical, physiological and agronomical trait response screening studies on potato stress response are available to characterize the parameters from both pathogen and host sides. However, molecular studies to identify candidate biotic stress-associated genes are limited. For understanding and identification of biotic stress responsive plant genes, several approaches, such as RNA-seq-based gene expression profiling, gene expression microarray and transcriptome analyses give an insight to the molecular mechanisms of biotic stress tolerance in potato. Comprehending of plant-herbivore and plant-pathogen mechanisms in plant defense responses will be effective to protect plants against biotic stresses, and to develop cultivars with higher stress tolerance. Here, we present the current molecular studies of potato responses under biotic stresses.Int Soc Hort Sc

Perspectives on care and communication involving incurably ill Turkish and Moroccan patients, relatives and professionals: a systematic literature review

<p>Abstract</p> <p>Background</p> <p>Our aim was to obtain a clearer picture of the relevant care experiences and care perceptions of incurably ill Turkish and Moroccan patients, their relatives and professional care providers, as well as of communication and decision-making patterns at the end of life. The ultimate objective is to improve palliative care for Turkish and Moroccan immigrants in the Netherlands, by taking account of socio-cultural factors in the guidelines for palliative care.</p> <p>Methods</p> <p>A systematic literature review was undertaken. The data sources were seventeen national and international literature databases, four Dutch journals dedicated to palliative care and 37 websites of relevant national and international organizations. All the references found were checked to see whether they met the structured inclusion criteria. Inclusion was limited to publications dealing with primary empirical research on the relationship between socio-cultural factors and the health or care situation of Turkish or Moroccan patients with an oncological or incurable disease. The selection was made by first reading the titles and abstracts and subsequently the full texts. The process of deciding which studies to include was carried out by two reviewers independently. A generic appraisal instrument was applied to assess the methodological quality.</p> <p>Results</p> <p>Fifty-seven studies were found that reported findings for the countries of origin (mainly Turkey) and the immigrant host countries (mainly the Netherlands). The central themes were experiences and perceptions of family care, professional care, end-of-life care and communication. Family care is considered a duty, even when such care becomes a severe burden for the main female family caregiver in particular. Professional hospital care is preferred by many of the patients and relatives because they are looking for a cure and security. End-of-life care is strongly influenced by the continuing hope for recovery. Relatives are often quite influential in end-of-life decisions, such as the decision to withdraw or withhold treatments. The diagnosis, prognosis and end-of-life decisions are seldom discussed with the patient, and communication about pain and mental problems is often limited. Language barriers and the dominance of the family may exacerbate communication problems.</p> <p>Conclusions</p> <p>This review confirms the view that family members of patients with a Turkish or Moroccan background have a central role in care, communication and decision making at the end of life. This, in combination with their continuing hope for the patient’s recovery may inhibit open communication between patients, relatives and professionals as partners in palliative care. This implies that organizations and professionals involved in palliative care should take patients’ socio-cultural characteristics into account and incorporate cultural sensitivity into care standards and care practices<it>.</it></p

Acute maternal infection and risk of pre-eclampsia: a population-based case-control study.

BACKGROUND: Infection in pregnancy may be involved in the aetiology of pre-eclampsia. However, a clear association between acute maternal infection and pre-eclampsia has not been established. We assessed whether acute urinary tract infection, respiratory tract infection, and antibiotic drug prescriptions in pregnancy (a likely proxy for maternal infection) are associated with an increased risk of pre-eclampsia. METHODS AND FINDINGS: We used a matched nested case-control design and data from the UK General Practice Research Database to examine the association between maternal infection and pre-eclampsia. Primiparous women aged at least 13 years and registered with a participating practice between January 1987 and October 2007 were eligible for inclusion. We selected all cases of pre-eclampsia and a random sample of primiparous women without pre-eclampsia (controls). Cases (n=1533) were individually matched with up to ten controls (n=14236) on practice and year of delivery. We calculated odds ratios and 95% confidence intervals for pre-eclampsia comparing women exposed and unexposed to infection using multivariable conditional logistic regression. After adjusting for maternal age, pre-gestational hypertension, diabetes, renal disease and multifetal gestation, the odds of pre-eclampsia were increased in women prescribed antibiotic drugs (adjusted odds ratio 1.28;1.14-1.44) and in women with urinary tract infection (adjusted odds ratio 1.22;1.03-1.45). We found no association with maternal respiratory tract infection (adjusted odds ratio 0.91;0.72-1.16). Further adjustment for maternal smoking and pre-pregnancy body mass index made no difference to our findings. CONCLUSIONS: Women who acquire a urinary infection during pregnancy, but not those who have a respiratory infection, are at an increased risk of pre-eclampsia. Maternal antibiotic prescriptions are also associated with an increased risk. Further research is required to elucidate the underlying mechanism of this association and to determine whether, among women who acquire infections in pregnancy, prompt treatment or prophylaxis against infection might reduce the risk of pre-eclampsia

High-resolution analysis of multi-copy variant surface glycoprotein gene expression sites in African trypanosomes

BACKGROUND: African trypanosomes cause lethal diseases in humans and animals and escape host immune attack by switching the expression of Variant Surface Glycoprotein (VSG) genes. The expressed VSGs are located at the ends of telomeric, polycistronic transcription units known as VSG expression sites (VSG-ESs). Each cell has many VSG-ESs but only one is transcribed in bloodstream-form parasites and all of them are inactive upon transmission to the insect vector mid-gut; a subset of monocistronic metacyclic VSG-ESs are then activated in the insect salivary gland. Deep-sequence analyses have been informative but assigning sequences to individual VSG-ESs has been challenging because they each contain closely related expression-site associated genes, or ESAGs, thought to contribute to virulence. RESULTS: We utilised ART, an in silico short read simulator to demonstrate the feasibility of accurately aligning reads to VSG-ESs. Then, using high-resolution transcriptomes from isogenic bloodstream and insect-stage Lister 427 Trypanosoma brucei, we uncover increased abundance in the insect mid-gut stage of mRNAs from metacyclic VSG-ESs and of mRNAs from the unusual ESAG, ESAG10. Further, we show that the silencing associated with allelic exclusion involves repression focussed at the ends of the VSG-ESs. We also use the approach to report relative fitness costs following ESAG RNAi from a genome-scale screen. CONCLUSIONS: By assigning sequences to individual VSG-ESs we provide new insights into VSG-ES transcription control, allelic exclusion and impacts on fitness. Thus, deeper insights into the expression and function of regulated multi-gene families are more accessible than previously anticipated. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-3154-8) contains supplementary material, which is available to authorized users