745 research outputs found

    TOU-AR:Touchable Interface for Interactive Interaction in Augmented Reality Environment

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    Touchable interface is one of the future interfaces that can be implemented at any medium such as water, table or even sand. The word multi touch refers to the ability to distinguish between two or more fingers touching a touch-sensing surface, such as a touch screen or a touch pad. This interface is provided tracking the area by using depth camera and projected the interface into the medium. This interface is widely used in augmented reality environment. User will project the particular interface into real world medium and user hand will be tracked simultaneously when touching the area. User can interact in more freely ways and as natural as human did in their daily lif

    Multi-tenancy in cloud computing

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    As Cloud Computing becomes the trend of information technology computational model, the Cloud security is becoming a major issue in adopting the Cloud where security is considered one of the most critical concerns for the large customers of Cloud (i.e. governments and enterprises). Such valid concern is mainly driven by the Multi-Tenancy situation which refers to resource sharing in Cloud Computing and its associated risks where confidentiality and/or integrity could be violated. As a result, security concerns may harness the advancement of Cloud Computing in the market. So, in order to propose effective security solutions and strategies a good knowledge of the current Cloud implementations and practices, especially the public Clouds, must be understood by professionals. Such understanding is needed in order to recognize attack vectors and attack surfaces. In this paper we will propose an attack model based on a threat model designed to take advantage of Multi-Tenancy situation only. Before that, a clear understanding of Multi-Tenancy, its origin and its benefits will be demonstrated. Also, a novel way on how to approach Multi-Tenancy will be illustrated. Finally, we will try to sense any suspicious behavior that may indicate to a possible attack where we will try to recognize the proposed attack model empirically from Google trace logs. Google trace logs are a 29-day worth of data released by Google. The data set was utilized in reliability and power consumption studies, but not been utilized in any security study to the extent of our knowledge

    Development and Implementation of Workshop Management System Application to Explore Combing Multiple Design Patterns

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    As systems creation are becoming more complex, we face more problems that are related to system construction rather than those problems related to analysis. Design patterns represent a clear way of solving designing problems in the context of a particular computer application. Combining design patterns is one approach that is used to allow flexibility in building applications with multiple problems. The Workshop Management System application is built to demonstrate the idea of combining multiple design patterns. To support the idea, we show how to build the application by following the structures and methods that are provided by design patterns. Essentially, we show how these structures help developers to express a flexible system creation

    Exploring TripAdvisor Online Reviews: The Case of George Eastman Museum

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    Different studies have looked at visitor related motivations and experiences under different contexts in the tourism industry. The museum-related experiences remain one of the important elements which are sought by visitors to the museums. Therefore, this study purposes to investigate and determine personal context, social context and physical contexts of George Eastman museum visitors. More importantly, the study utilised a content analysis approach in its research. The specific data about visitors to George Eastman House was obtained from the social media website TripAdvisor. The findings of the study were based on three important elements: personal context, social context and physical contexts. In the personal context based on John Falk classifications (experience seeker, explorer, facilitator, prof-hobbyist, and recharger); the experience seeker had the highest number of visitor comments about 76 reviewers, with explorer category being less represented while recharger category had the least number of visitor’s comments. On the aspect of social context, about 12% reviewers indicated the social context where the socio-cultural influence was considered one of the determinants of their museum-visit experience. Furthermore, the physical context was expressed through identified dominant themes that included mansion, the museum exhibits, and George Eastman’s personality. In both the analysis of negative and the positive dimensions of the themes, the mansion theme showed a higher positive response in the while the museum and the exhibits showed relatively a negative dimension in the analysis. Through a word cloud visualization approach memories and learning outcomes were analysed with findings indicating “Memory/impression of visit”; “Takes you back” (their experience of being drawn back into the past or into a personal memory of previous times, etc.); and most importantly, “Learn from the visit”, were the most predominant themes in memorial and learning outcomes. This study provided important insight into visitor experiences, which can be utilised by George Eastman management to understand perceptions of visitors and thus enhance their services. Furthermore, it is recommended that future studies adopt bigger samples as well as diverse contexts besides the museum in order to be able to get an in-depth insight into museum visitor’s experiences

    STYLE, CONTEXT AND TRANSLATED NARRATIVES: A SOCIO-SEMIOTIC PROFILE FOR STUDYING STYLE IN TRANSLATED NARRATIVES

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    A translated narrative has both its structure and texture creatively reproduced in the decoding-reencoding processes. These processes of intersemiotic and interlingual transformations yield variable results influenced by language-in-context, as the broadest environment of translation, and prompted by the level of the typological and semiotic distance between texts. Translation is thus an act of communication that is separate (contextually and discursively) from, while it is still dependent (semantically) on, the original writing. Here, the translator’s style is an “imprint” that is simultaneously compelled by the creativity of the literary translation act and the existence of the targeted reader in a new socio-semiotic context (Baker, 2000; Hasan, 1986/2011, 1989; Hatim Mason, 1997; Malmkjær, 2004; Matthiessen, 2001). In response to Baker (2000), the present study aims to theoretically revisit the issue of style in narrative translation in a comparative view that takes into consideration the multiple contexts and meta-contexts of the acts of creation and translation. This comparative intersemiotic view ventures to address the complexity of narrative meaning recreation in these new acts of communication along the multi-stratal systems of language and narrative and in the light of the narrative, stylistic and socio-semiotic views of discourse and meaning

    Regulation of TNF-alpha gene expression by TNFAIP1 as an activator or suppressor in response to lipopolysaccharide

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    OBJECTIVE: To determine the link between the tumor necrosis factor induced protein 1(TNFAIP1) and TNF-alpha production in response to the P.gingivalis/LPS, and to investigate the mechanism that regulates the effect of the TNFAIP1 gene expression on TNF-alpha synthesis, using a new, simple, yet effective technique that allowed us to apply our methods on human macrophages. MATERIALS AND METHODS: We performed several experiments including: A culture of mouse RAW cells and human THP-1 cells in RPMI media supplemented with 10% FBS at 37°C in 5% CO2, Polymerase Chain reaction (PCR) using specifically designed primers and DNA cloning of TNFAIP1, transfection of the cloned TNFAIP1 cDNA into macrophages, Western blot analysis, ELISA analysis after treatment in macrophages, and GFP imaging system. RESULTS: 1. TNFAIP1 expression can reciprocally affect TNF-α production in macrophages. 2. Blocking MAPK, PI3K and JAK downregulates the TNF-alpha production. 3. The transfection of TNFAIP1 in THP-1 using a 1.5 ml Eppendorf tube generated a high transfection efficiency without the PMA treatment. 4. TNFAIP1 induces Caspase 1 gene expression in macrophages. 5. Caspase 1 induced by TNFAIP1 functions downregulation of TNF-alpha via p73. CONCLUSIONS: 1. MAP kinase, JAK, or PI3K, may be involved in TNF-α gene expression in LPS-dependent pathway. 2. TNFAIP1 expression can induce TNF-alpha production in mouse macrophages and vice versa. 3. TNFAIP1 gene expression in response to LPS is independent of NFkB-mediated signaling pathway. 4. The animal model has been confirmed by using both mouse macrophage-like cells (RAW cells) and a human macrophage-like cells (THP-1 cells). 5. The signaling pathway for the activation of TNF-alpha production in early stages is: LPS/ TNFAIP1/ PI3Kinase/AP-1/ TNF-alpha. 6. TNFAIP1 acts as a suppressor in later stage to down-regulate TNF-α gene expression via the following signaling pathway: LPS/TNF-alpha/ TNFAIP1/ Caspase 1/ Apoptotic genes/ Degradation of TNF-α/ Cell apoptosis

    Potentiometric determination of stability constants and thermodynamic data for ternary Cd(II) complexes with 2-aminomethyl benzimidazole (AMBI) and other bioactive ligands

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    The complexing properties of 2-(aminomethyl)-benzimidazole with cadmium(II) were investigated pH-metrically at 25 oC and at ionic strength of 0.1 mol.dm-3 (NaNO3). Ternary complex formation equilibria of cadmium(II) complexes involving (AMBI) and some bio-relevant ligands (L = amino acid and peptides) have been investigated. Ternary complexes of amino acids and peptides are formed by a simultaneous mechanism. Amino acids form the complex Cd(AMBI)L, whereas amides form two complex species Cd(AMBI)L and Cd(AMBI)(LH-1). The stability of ternary complexes was quantitatively compared with their corresponding binary complexes in terms of the parameters ΔLog K, Log βStat and Log X. The effect of the side chains of amino acid ligands (ΔR) on complex formation was discussed. The values of ΔLog K indicate that the ternary complexes containing aromatic amino acids are significantly more stable than the complexes containing alkyl- and hydroxyalkyl-substituted amino acids. This may be taken as evidence for a stacking interaction between the aromatic moiety of AMBI and the aromatic side chains of the bioactive ligands. The concentration distributions of various species formed in solution were also evaluated as a function of pH. The thermodynamic parameters ΔHo, ΔGo and ΔSo calculated from the temperature dependence of the equilibrium constants were investigated for the interaction of Cd(II)-AMBI with glycine as a representative example of amino acids

    BISPHOSOHOGLYCERTAE MUTASE: A POTENTIAL TARGET FOR SICKLE CELL DISEASE

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    Bisphosphoglycerate mutase (BPGM) is a part of the erythrocyte glycolysis system. Specifically, it is a central enzyme in the Rapoport-Leubering pathway, a side glycolytic pathway involved in the regulation of the concentration of the natural allosteric effector of hemoglobin (Hb), 2,3-bisphosphoglycerate (2,3-BPG). BPGM catalyses the synthesis and hydrolysis of 2,3-BPG through its synthase and phosphatase activities. The synthase activity is the main role of BPGM, while the phosphatase activity is low and is activated by the physiological effector, 2-phosphoglycolate (2-PG) with the latter mechanism poorly understood. BPGM activity and 2,3-BPG levels in red blood cells (RBCs) have a significant role in sickle cell disease (SCD) pathology. SCD patients experience a constant state of hypoxia that results in increasing the level of 2,3-BPG as a compensatory mechanism to enhance oxygen delivery to tissues. However, the abnormal increase in 2,3-BPG in RBCs of SCD patients exacerbates the disease’s primary pathophysiology, which is the hypoxia-driven deoxygenated-sickle hemoglobin (HbS) polymerization, that in turn leads to RBCs sickling and consequent numerous downstream multi-organ adverse effects. Reducing the levels of 2,3-BPG by activating BPGM phosphatase activity using 2-PG has been proposed as a potential therapeutic approach for SCD as 2-PG was found to have an anti-sickling property. Nonetheless, the actual activation mechanism of 2-PG on the phosphatase activity or the binding mode of 2-PG to BPGM is not clear. Moreover, no drug screening studies have been performed to identify small molecules against BPGM for therapeutic purposes. The objectives of this project are to characterize the steady-state kinetics of BPGM synthase and phosphatase activities, understand the mechanism of phosphatase activation, and elucidate the atomic interaction of BPGM with 2-PG and other effectors such as citrate that can provide valuable insight into their mechanism of actions and provide a framework for developing small molecules with potential SCD therapeutic benefit. In addition, we aim to identify ligands that modulate either BPGM phosphatase and/or synthase activity to reduce 2,3-BPG concentration in RBCs. First, the steady-state kinetics of BPGM synthase and phosphatase activities were characterized using the previously reported coupled spectrophotometric synthase and phosphatase activities assays. These assays were also optimized for drug screening experiments. Both assays have limitations and proved challenging for drug screening. We also employed the colorimetric malachite green assay to study BPGM phosphatase activity, as well as for compound screening. Next, we elucidated the mechanism of phosphatase activity activation by 2-PG using kinetic and X-ray crystallography studies. The kinetic study showed the mechanism of 2-PG activation of BPGM to be mixed-type of noncompetitive and competitive, suggesting the binding of 2-PG to the active site and to an allosteric or non-catalytic site of the enzyme. The crystal structures of BPGM with 2-PG in the presence and absence of the substrate 2,3-BPG showed binding of the 2-PG and/or 3-PGA (the reaction product of 2,3-BPG) at the expected active site, and at a novel non-catalytic site at the dimer interface, in agreement with the kinetic analysis. The structural studies of BPGM also showed conformational nonequivalence of the two monomeric active sites: one site in a close catalytic conformation, and the second site in an open conformation, with the residues at the entrance of the active site, including Arg100, Arg116, and Arg117, and the C-terminus region disordered, which we propose to be induced by the dimer interface binding. In order to gain further insight into the BPGM mechanism of action, we also co-crystallized BPGM with citrate, a known BPGM phosphatase inhibitor. The co-crystal structure of BPGM with citrate showed citrate binding to only one of the dimer active sites and to the dimer interface. The kinetic and crystallographic findings suggest for the first time an allosterism or cooperativity across monomers, in which the binding of a ligand at the dimer interface induces negative cooperativity affecting the affinity of ligand binding at the second active site. In the BPGM•citrtate binary complex, an extreme form of negative cooperativity, where half of the site reactivity is observed, shows that only one active site appears to be functional. Toward the objective of identifying small molecules modulators of BPGM activity for therapeutic purposes, we identified several compounds that target the active site of BPGM using (1) in-house pharmacophore-based virtual screening and molecular docking; (2) machine learning-based molecular screening in collaboration with the pharmaceutical company Atomwise, and (3) PGM1-004A, a known inhibitor of the homologous enzyme, phosphoglycerate mutase 1 (PGAM1). The compounds were tested for their effect on BPGM synthase and phosphatase activities. Unfortunately, the compounds did not show any modulation except for PGMI-004A, which shows a dose-dependent synthase inhibition with IC50 (50±11 µM). Several attempts were made to co-crystallize BPGM with PGMI-004A but were unsuccessful. The novel allosteric site at the dimer interface was also docked against a library of compounds, which identified several potential binders. The top-scoring compounds will be obtained and tested in the near future

    Determination of the Effects of Different Maillard Reaction Products on the Taxonomic Composition of the Gut Microbiota

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    The Maillard Reaction (MR) is a non-enzymatic chemical reaction which results in linkage between the amino group of amino acids and the carbonyl group of reduced sugars. This reaction generates Maillard reaction products (MRPs) which are not present naturally in foods, and are responsible for a range of colors, odors, flavors, and other sensory properties. Conflicting reports of MRPs impacts on human health are probably due to the fact that bioconversion of these digestible molecules by the gut microbiota has been marginally taken into account. This study aimed to determine the effects of different MRPs on rodent’s gut microbiota through16S rRNA amplicon sequencing over three different studies. Study 1 focused on the impact of NƐCarboxymethyllysine (CML) on the composition of mice gut microbiota and potential association with severity of experimental colitis. Study 2 focused on the impact of bread melanoidins on the composition of healthy and experimental colitis mice gut microbiota. Study 3 focused on the impact of consumption of increasing amounts of malt melanoidins on mice gut microbiota. It was found that CML induced limited changes in gut microbiota profiles of healthy mice, but was found to significantly relieve the bacterial dysbiosis imparted by one (but not the other) inflammation-inducing chemical, especially the Proteobacteria bloom. Bread crust model (high in melanoidins) showed significant decreases of Bacteroides spp. and Enterobacteriaceae, while it increased Faecalibacterium spp. Also, bread crust model limited to increase Enterobacteriaceae in colitis model. High amounts of malts rich melanoidins rapidly and persistently led to significantly different gut microbiota profiles. There was a trend for decrease of Lactobacillus and Ruminococcus and increase of Akkermansia and Bifidobacterium with higher amounts of dietary melanoidins. We concluded that CML and melanoidins are not detrimental in terms of their impact on the gut microbiota, and that they may even have prebiotic properties
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