1,873 research outputs found
Temperature gradient driven heat flux closure in fluid simulations of collisionless reconnection
Recent efforts to include kinetic effects in fluid simulations of plasmas
have been very promising. Concerning collisionless magnetic reconnection, it
has been found before that damping of the pressure tensor to isotropy leads to
good agreement with kinetic runs in certain scenarios. An accurate
representation of kinetic effects in reconnection was achieved in a study by
Wang et al. (Phys. Plasmas, volume 22, 2015, 012108) with a closure derived
from earlier work by Hammett and Perkins (PRL, volume 64, 1990, 3019). Here,
their approach is analyzed on the basis of heat flux data from a Vlasov
simulation. As a result, we propose a new local closure in which heat flux is
driven by temperature gradients. That way, a more realistic approximation of
Landau damping in the collisionless regime is achieved. Previous issues are
addressed and the agreement with kinetic simulations in different reconnection
setups is improved significantly. To the authors' knowledge, the new fluid
model is the first to perform well in simulations of the coalescence of large
magnetic islands.Comment: 14 pages, 7 figure
Modified mean curvature flow of entire locally Lipschitz radial graphs in hyperbolic space
The asymptotic Plateau problem asks for the existence of smooth complete
hypersurfaces of constant mean curvature with prescribed asymptotic boundary at
infinity in the hyperbolic space . The modified mean
curvature flow (MMCF) was firstly introduced by Xiao and the second author a
few years back, and it provides a tool using geometric flow to find such
hypersurfaces with constant mean curvature in . Similar to
the usual mean curvature flow, the MMCF is the natural negative -gradient
flow of the area-volume functional associated to a hypersurface . In this paper, we prove that
the MMCF starting from an entire locally Lipschitz continuous radial graph
exists and stays radially graphic for all time. In general one cannot expect
the convergence of the flow as it can be seen from the flow starting from a
horosphere (whose asymptotic boundary is degenerate to a point).Comment: 22pages, 2 figure
Constraints on crustal attenuation and three-dimensional spatial distribution of stress drop in Switzerland
We employ two different methods to estimate attenuation-corrected source spectra and calculate Brune stress drops of small to medium earthquakes in Switzerland and the surrounding region. We test trade-offs between source and travel path contributions by comparing results between a data-driven and a model-dependent method of distinguishing between the two. Systematic differences between results from both methods can best be reconciled by assuming intrinsic whole-path attenuation to be frequency dependent. A two-parameter grid search based on a power-law Q( f ) function reveals trade-offs that prevent us from quantifying a more exact frequency dependence. However, a comparison of the two-source parameter inversion methods with synthetic tests provide evidence for a non-negligible frequency dependence of Q between 1 and 30 Hz. Consideration of these implications on the attenuation model, as well as consideration of lateral and vertical variations of velocity and quality factor reduces the scatter of the obtained stress drop estimates. Synthetic tests confirm that both methods are able to robustly resolve lateral variations of Brune stress drop with quantifiable uncertainty estimates. Resulting lateral variations show reduced stress drop along the Alpine deformation front. This pattern points to tectonic causes and may be due to variations in differential stres
Automatic computation of moment magnitudes for small earthquakes and the scaling of local to moment magnitude
Moment magnitudes (MW) are computed for small and moderate earthquakes using a spectral fitting method. 40 of the resulting values are compared with those from broadband moment tensor solutions and found to match with negligible offset and scatter for available MW values of between 2.8 and 5.0. Using the presented method, MW are computed for 679 earthquakes in Switzerland with a minimum ML= 1.3. A combined bootstrap and orthogonal L1 minimization is then used to produce a scaling relation between ML and MW. The scaling relation has a polynomial form and is shown to reduce the dependence of the predicted MW residual on magnitude relative to an existing linear scaling relation. The computation of MW using the presented spectral technique is fully automated at the Swiss Seismological Service, providing real-time solutions within 10 minutes of an event through a web-based XML database. The scaling between ML and MW is explored using synthetic data computed with a stochastic simulation method. It is shown that the scaling relation can be explained by the interaction of attenuation, the stress-drop and the Wood-Anderson filter. For instance, it is shown that the stress-drop controls the saturation of the ML scale, with low-stress drops (e.g. 0.1-1.0 MPa) leading to saturation at magnitudes as low as ML=
1-(Hydroxymethyl)pyrene
The asymmetric unit of the title compound, C17H12O, contains two molecules, in which the fused aromatic ring systems are almost planar [maximum deviations = 0.0529 (9) and 0.0256 (9) Å]. In the crystal, aromatic π–π stacking interactions (perpendicular distance of centroids of about 3.4 Å) and strong O—H...O hydrogen bonds result in a helical arrangement of pyrenyl dimers
Isomers of green leaf volatiles in Nicotiana attenuata and their role in plant-insect interactions
Approximate nearest neighbors for recognition of foreground and background in images and video
Problems in image matching, saliency detection in images, and background detection in video are studied. Algorithms based on approximate nearest-neighbor matching are proposed to solve problems in these related domains. Image patches are quantized into features using a special Walsh-Hadamard transform, and put into a propagation-assisted kd-tree for indexing and search. Image saliency and background-detection algorithms are then derived by looking at patch similarity over time and space
A morphological view on mitochondrial protein targeting
Mitochondrial protein targeting includes both intramitochondrial sorting of proteins encoded by the organellar genome and import and subsequent sorting of nuclear encoded precursor proteins. Only a few proteins are encoded by the mitochondrial genome and synthesized in the organellar matrix. These include predominantly inner membrane proteins that are perhaps co-translationally inserted into this membrane. Biochemical data suggest that insertion into the inner membrane may be confined to the inner boundary membrane. Ultrastructurally, however, a preferential association of ribosomes with either inner boundary or cristae membranes has not been established.
The majority of the mitochondrial proteins are nuclear encoded and synthesized as precursors in the cytosol. Electron microscopic studies revealed that import of precursor proteins is generally confined to sites where both mitochondrial envelope membranes are closely apposed. In line with these observations, biochemical studies indicated that precursor proteins destined for the inner membrane or matrix have to interact with the energized inner membrane to allow complete passage of the precursor through the outer membrane. As a consequence, the mitochondrial envelope membranes have to be in close proximity at protein import sites.
In isolated mitochondria distinct sites (designated as contact sites) exist where both envelope membranes are closely apposed and presumably stably associated. In situ, however, mitochondrial boundary membranes are in close proximity over large areas that cover almost the entire mitochondrial periphery. Consequently, the relative area of the mitochondrial surface, where both boundary membranes are in sufficient proximity for allowing protein translocation, is generally larger in situ compared to that in isolated organelles.
Immunocytochemical localization studies showed a rather random distribution of components of the mitochondrial protein translocation machinery over the entire mitochondrial surface and not confined to contact sites.
Based on these ultrastructral data and recent biochemical findings we propose that mitochondrial protein import sites are dynamic in nature and include relatively labile regions of close association of the boundary membranes. In vitro, however, mitochondrial protein import may preferentially take place at or near the presumably stable contact sites
Functional and Biogenetical Heterogeneity of the Inner Membrane of Rat-Liver Mitochondria
Rat liver mitochondria were fragmented by a combined technique of swelling, shrinking, and sonication. Fragments of inner membrane were separated by density gradient centrifugation. They differed in several respects: electronmicroscopic appearance, phospholipid and cytochrome contents, electrophoretic behaviour of proteins and enzymatic activities.
Three types of inner membrane fractions were isolated. The first type is characterized by a high activity of metal chelatase, low activities of succinate-cytochrome c reductase and of glycerolphosphate dehydrogenase, as well as by a high phospholipid content and low contents of cytochromes aa3 and b.
The second type displays maximal activities of glycerolphosphate dehydrogenase and metal chelatase, but contains relatively little cytochromes and has low succinate-cytochrome c reductase activity.
The third type exhibits highest succinate-cytochrome c reductase activity, a high metal chelatase activity and highest cytochrome contents. However, this fraction was low in both glycerolphosphate dehydrogenase activity and phospholipid content. This fraction was also richest in the following enzyme activities: cytochrome oxidase, oligomycin-sensitive ATPase, proline oxidase, 3-hydroxybutyrate dehydrogenase and rotenone-sensitive NADH-cytochrome c reductase.
Amino acid incorporation in vitro and in vivo in the presence of cycloheximide occurs predominantly into inner membrane fractions from the second type.
These data suggest that the inner membrane is composed of differently organized parts, and that polypeptides synthesized by mitochondrial ribosomes are integrated into specific parts of the inner membrane
The introduction of structure types into the Inorganic Crystal Structure Database ICSD
The approach used and the progress made in the assignment of structure types to the crystal structures contained in the ICSD database are reported
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