100 research outputs found
Detecting stars, galaxies, and asteroids with Gaia
(Abridged) Gaia aims to make a 3-dimensional map of 1,000 million stars in
our Milky Way to unravel its kinematical, dynamical, and chemical structure and
evolution. Gaia's on-board detection software discriminates stars from spurious
objects like cosmic rays and Solar protons. For this, parametrised
point-spread-function-shape criteria are used. This study aims to provide an
optimum set of parameters for these filters. We developed an emulation of the
on-board detection software, which has 20 free, so-called rejection parameters
which govern the boundaries between stars on the one hand and sharp or extended
events on the other hand. We evaluate the detection and rejection performance
of the algorithm using catalogues of simulated single stars, double stars,
cosmic rays, Solar protons, unresolved galaxies, and asteroids. We optimised
the rejection parameters, improving - with respect to the functional baseline -
the detection performance of single and double stars, while, at the same time,
improving the rejection performance of cosmic rays and of Solar protons. We
find that the minimum separation to resolve a close, equal-brightness double
star is 0.23 arcsec in the along-scan and 0.70 arcsec in the across-scan
direction, independent of the brightness of the primary. We find that, whereas
the optimised rejection parameters have no significant impact on the
detectability of de Vaucouleurs profiles, they do significantly improve the
detection of exponential-disk profiles. We also find that the optimised
rejection parameters provide detection gains for asteroids fainter than 20 mag
and for fast-moving near-Earth objects fainter than 18 mag, albeit this gain
comes at the expense of a modest detection-probability loss for bright,
fast-moving near-Earth objects. The major side effect of the optimised
parameters is that spurious ghosts in the wings of bright stars essentially
pass unfiltered.Comment: Accepted for publication in A&
Proteínas secretadas por el haustorio y su importancia en el desarrollo de Podosphaera xanthii
El cultivo de las cucurbitáceas en España se ve afectado, entre otros problemas, por Podosphaera xanthii, un hongo biotrofo obligado y principal agente causal del oídio de las cucurbitáceas. Este hongo, que requiere células vivas de la planta para completar su ciclo de vida asexual, desarrolla unas estructuras especiales de parasitismo denominadas haustorios. Los haustorios prosperan dentro de las células epidérmicas y son responsables de la relación directa entre el patógeno y el hospedador, participando en la absorción de nutrientes de la planta y en la liberación de efectores en las células del huésped.
Dada la estrecha relación entre los haustorios y las células vegetales, desarrollamos un transcriptoma haustorial de novo de P. xanthii y definimos su secretoma con la intención de encontrar proteínas secretadas que sean esenciales para la patogénesis. De esta manera pudimos identificar diferentes proteínas, la mayoría de ellas sin función anotada, expresadas específicamente en el haustorio. Gracias al modelado proteico obtuvimos información relevante sobre la posible función de alguna de estas proteínas secretadas sin anotación funcional y seleccionamos varias para su validación funcional mediante silenciamiento génico en el hospedador mediado por Agrobacterium (ATM-HIGS). Además, la expresión heteróloga de las proteínas seleccionadas y los subsecuentes ensayos enzimáticos nos ha permitido corroborar su actividad bioquímica predicha. Así, pudimos comprobar cómo proteínas secretadas específicamente por el haustorio son muy importantes para el desarrollo fúngico.
Este abordaje multidisciplinar nos ha permitido identificar y dilucidar la función de proteínas esenciales para P. xanthii que, dado su papel clave, se convierten en dianas esperanzadoras para el desarrollo de nuevo fitosanitarios contra el oídio de las cucurbitáceas y otros hongos fitopatógenos.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech.
Este trabajo ha sido financiado por el Ministerio de Economía y Competitividad (AGL2013-41939-R; AGL2016-76216-C2-1-R) cofinanciado con fondos FEDER (UE). Álvaro Polonio es beneficiario de un contrato predoctoral (BES-2014-068602) para la formación de doctores del Ministerio de Economía y Competitividad. Los autores también agradecen ayudas del Plan Propio de Investigación de la Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech
<i>Gaia</i> Data Release 1. Summary of the astrometric, photometric, and survey properties
Context. At about 1000 days after the launch of Gaia we present the first Gaia data release, Gaia DR1, consisting of astrometry and photometry for over 1 billion sources brighter than magnitude 20.7.
Aims. A summary of Gaia DR1 is presented along with illustrations of the scientific quality of the data, followed by a discussion of the limitations due to the preliminary nature of this release.
Methods. The raw data collected by Gaia during the first 14 months of the mission have been processed by the Gaia Data Processing and Analysis Consortium (DPAC) and turned into an astrometric and photometric catalogue.
Results. Gaia DR1 consists of three components: a primary astrometric data set which contains the positions, parallaxes, and mean proper motions for about 2 million of the brightest stars in common with the HIPPARCOS and Tycho-2 catalogues – a realisation of the Tycho-Gaia Astrometric Solution (TGAS) – and a secondary astrometric data set containing the positions for an additional 1.1 billion sources. The second component is the photometric data set, consisting of mean G-band magnitudes for all sources. The G-band light curves and the characteristics of ∼3000 Cepheid and RR-Lyrae stars, observed at high cadence around the south ecliptic pole, form the third component. For the primary astrometric data set the typical uncertainty is about 0.3 mas for the positions and parallaxes, and about 1 mas yr−1 for the proper motions. A systematic component of ∼0.3 mas should be added to the parallax uncertainties. For the subset of ∼94 000 HIPPARCOS stars in the primary data set, the proper motions are much more precise at about 0.06 mas yr−1. For the secondary astrometric data set, the typical uncertainty of the positions is ∼10 mas. The median uncertainties on the mean G-band magnitudes range from the mmag level to ∼0.03 mag over the magnitude range 5 to 20.7.
Conclusions. Gaia DR1 is an important milestone ahead of the next Gaia data release, which will feature five-parameter astrometry for all sources. Extensive validation shows that Gaia DR1 represents a major advance in the mapping of the heavens and the availability of basic stellar data that underpin observational astrophysics. Nevertheless, the very preliminary nature of this first Gaia data release does lead to a number of important limitations to the data quality which should be carefully considered before drawing conclusions from the data
Gaia Data Release 1: Testing parallaxes with local Cepheids and RR Lyrae stars
Context. Parallaxes for 331 classical Cepheids, 31 Type II Cepheids, and 364 RR Lyrae stars in common between Gaia and the Hipparcos and Tycho-2 catalogues are published in Gaia Data Release 1 (DR1) as part of the Tycho-Gaia Astrometric Solution (TGAS). Aims. In order to test these first parallax measurements of the primary standard candles of the cosmological distance ladder, which involve astrometry collected by Gaia during the initial 14 months of science operation, we compared them with literature estimates and derived new period-luminosity (PL), period-Wesenheit (PW) relations for classical and Type II Cepheids and infrared PL, PL-metallicity (PLZ), and optical luminosity-metallicity (M V -[Fe/H]) relations for the RR Lyrae stars, with zero points based on TGAS. Methods. Classical Cepheids were carefully selected in order to discard known or suspected binary systems. The final sample comprises 102 fundamental mode pulsators with periods ranging from 1.68 to 51.66 days (of which 33 with σ Ω /Ω < 0.5). The Type II Cepheids include a total of 26 W Virginis and BL Herculis stars spanning the period range from 1.16 to 30.00 days (of which only 7 with σ Ω /Ω < 0.5). The RR Lyrae stars include 200 sources with pulsation period ranging from 0.27 to 0.80 days (of which 112 with σ Ω /Ω < 0.5). The new relations were computed using multi-band (V,I,J,K s ) photometry and spectroscopic metal abundances available in the literature, and by applying three alternative approaches: (i) linear least-squares fitting of the absolute magnitudes inferred from direct transformation of the TGAS parallaxes; (ii) adopting astrometry-based luminosities; and (iii) using a Bayesian fitting approach. The last two methods work in parallax space where parallaxes are used directly, thus maintaining symmetrical errors and allowing negative parallaxes to be used. The TGAS-based PL,PW,PLZ, and M V - [Fe/H] relations are discussed by comparing the distance to the Large Magellanic Cloud provided by different types of pulsating stars and alternative fitting methods. Results. Good agreement is found from direct comparison of the parallaxes of RR Lyrae stars for which both TGAS and HST measurements are available. Similarly, very good agreement is found between the TGAS values and the parallaxes inferred from the absolute magnitudes of Cepheids and RR Lyrae stars analysed with the Baade-Wesselink method. TGAS values also compare favourably with the parallaxes inferred by theoretical model fitting of the multi-band light curves for two of the three classical Cepheids and one RR Lyrae star, which were analysed with this technique in our samples. The K-band PL relations show the significant improvement of the TGAS parallaxes for Cepheids and RR Lyrae stars with respect to the Hipparcos measurements. This is particularly true for the RR Lyrae stars for which improvement in quality and statistics is impressive. Conclusions. TGAS parallaxes bring a significant added value to the previous Hipparcos estimates. The relations presented in this paper represent the first Gaia-calibrated relations and form a work-in-progress milestone report in the wait for Gaia-only parallaxes of which a first solution will become available with Gaia Data Release 2 (DR2) in 2018. © ESO, 2017
Optimizing treatment for depression in primary care using psychotherapy versus antidepressant medication in a low-resource setting: protocol for the OptimizeD randomized controlled trial
Background: Psychotherapy and antidepressant medications are first-line treatments for depression, and they both have significant treatment effects on average. However, treatment response varies widely across patients, and neither approach is universally effective. Identifying the most effective treatment for each patient is critical everywhere, but particularly in low-resource settings where access to mental health care is limited. The Optimizing Depression (OptimizeD) trial aims to explore whether different patients respond differently to behavioral activation therapy versus antidepressant medication and if providing each patient with their optimal treatment improves outcomes in primary care. Methods: We plan to randomize 1,500 patients with moderate to severe depression (defined as a Patient Health Questionnaire [PHQ-9] score ≥ 10) from primary healthcare settings in Bhopal, India, with equal allocation either to a culturally adapted behavioral activation therapy delivered by trained counselors (Healthy Activity Program) or to antidepressant medication (fluoxetine). Treatment will last 3 months, with remission (defined as PHQ-9 score < 5) at 3 months as the primary endpoint. Using machine learning, we will attempt to develop a precision treatment rule that leverages baseline clinical, psychological, cognitive, socioeconomic, and biological data to predict which treatment is most likely to achieve remission for each patient. Cost-effectiveness analysis will then assess whether the added costs of optimizing treatment are justified by improvements in remission, recovery, and cost savings at the health system and societal levels. Secondary and exploratory objectives include assessing the effectiveness of optimization in a range of secondary outcomes, evaluating treatment mechanisms, and exploring whether incorporating genetic and biological markers as predictors improves treatment optimization. Discussion: The OptimizeD trial will evaluate whether baseline information collected in routine care can inform optimal depression treatment selection and identify predictors of nonresponse to facilitate timely specialist referrals. Findings have the potential to enhance personalized depression care in primary health systems, particularly in low-resource settings, with broader implications for global public health. Trial registration: ClinicalTrials.gov (NCT05944926; registered July 2, 2023) and Clinical Trials Registry India (CTRI/2024/01/061932; registered January 29, 2024)
Service user involvement for mental health system strengthening in India: a qualitative study
Gaia Data Release 1: Open cluster astrometry: performance, limitations, and future prospects
Context. The first Gaia Data Release contains the Tycho-Gaia Astrometric Solution (TGAS). This is a subset of about 2 million stars for which, besides the position and photometry, the proper motion and parallax are calculated using Hipparcos and Tycho-2 positions in 1991.25 as prior information.Aims. We investigate the scientific potential and limitations of the TGAS component by means of the astrometric data for open clusters.Methods. Mean cluster parallax and proper motion values are derived taking into account the error correlations within the astrometric solutions for individual stars, an estimate of the internal velocity dispersion in the cluster, and, where relevant, the effects of the depth of the cluster along the line of sight. Internal consistency of the TGAS data is assessed.Results. Values given for standard uncertainties are still inaccurate and may lead to unrealistic unit-weight standard deviations of least squares solutions for cluster parameters. Reconstructed mean cluster parallax and proper motion values are generally in very good agreement with earlier HIPPARCOS-based determination, although the Gaia mean parallax for the Pleiades is a significant exception. We have no current explanation for that discrepancy. Most clusters are observed to extend to nearly 15 pc from the cluster centre, and it will be up to future Gaia releases to establish whether those potential cluster-member stars are still dynamically bound to the clusters.Conclusions. The Gaia DR1 provides the means to examine open clusters far beyond their more easily visible cores, and can provide membership assessments based on proper motions and parallaxes. A combined HR diagram shows the same features as observed before using the HIPPARCOS data, with clearly increased luminosities for older A and F dwarfs
HLA-DQA1*05 carriage associated with development of anti-drug antibodies to infliximab and adalimumab in patients with Crohn's Disease
Anti-tumor necrosis factor (anti-TNF) therapies are the most widely used biologic drugs for treating immune-mediated diseases, but repeated administration can induce the formation of anti-drug antibodies. The ability to identify patients at increased risk for development of anti-drug antibodies would facilitate selection of therapy and use of preventative strategies.This article is freely available via Open Access. Click on Publisher URL to access the full-text
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