Understanding Genomic Evolution of Olfactory Receptors through Fractal and Mathematical Morphology

Fractals and Mathematical Morphology are immensely used to study many problems in different branches of science and technology including the domain of Biology. There are many more unrevealed facts and figures of genes and genome in Computational Biology. In this paper, our objective is to explore how the evolutionary network is associated among Human, Chimpanzee and Mouse with regards to their genomic information. We are about to explore their genomic evolution through the quantitative measures of fractals and morphology. We have considered olfactory receptors for our case study. These olfactory receptors do function in different species with subtle differences in the structures of DNA sequences. Those subtle differences can be exposed through intricate details of Fractals and Mathematical Morphology

Hidden dimers and the matrix maps: Fibonacci chains re-visited

The existence of cycles of the matrix maps in Fibonacci class of lattices is well established. We show that such cycles are intimately connected with the presence of interesting positional correlations among the constituent `atoms' in a one dimensional quasiperiodic lattice. We particularly address the transfer model of the classic golden mean Fibonacci chain where a six cycle of the full matrix map exists at the centre of the spectrum [Kohmoto et al, Phys. Rev. B 35, 1020 (1987)], and for which no simple physical picture has so far been provided, to the best of our knowledge. In addition, we show that our prescription leads to a determination of other energy values for a mixed model of the Fibonacci chain, for which the full matrix map may have similar cyclic behaviour. Apart from the standard transfer-model of a golden mean Fibonacci chain, we address a variant of it and the silver mean lattice, where the existence of four cycles of the matrix map is already known to exist. The underlying positional correlations for all such cases are discussed in details.Comment: 14 pages, 2 figures. Submitted to Physical Review

Metal-insulator transition in an aperiodic ladder network: an exact result

We show, in a completely analytical way, that a tight binding ladder network composed of atomic sites with on-site potentials distributed according to the quasiperiodic Aubry model can exhibit a metal-insulator transition at multiple values of the Fermi energy. For specific values of the first and second neighbor electron hopping, the result is obtained exactly. With a more general model, we calculate the two-terminal conductance numerically. The numerical results corroborate the analytical findings and yield a richer variety of spectrum showing multiple mobility edges.Comment: 4 pages, 3 figure

Gravitational time advancement and its possible detection

The gravitational time advancement is a natural but a consequence of curve space-time geometry. In the present work the expressions of gravitational time advancement have been obtained for geodesic motions. The situation when the distance of signal travel is small in comparison to the distance of closest approach has also been considered. The possibility of experimental detection of time advancement effect has been explored.Comment: 5 pages, 4 figures, a part of the work has been changed in the revised versio

Detection of DC currents and resistance measurements in longitudinal spin Seebeck effect experiments on Pt/YIG and Pt/NFO

In this work we investigated thin films of the ferrimagnetic insulators YIG and NFO capped with thin Pt layers in terms of the longitudinal spin Seebeck effect (LSSE). The electric response detected in the Pt layer under an out-of-plane temperature gradient can be interpreted as a pure spin current converted into a charge current via the inverse spin Hall effect. Typically, the transverse voltage is the quantity investigated in LSSE measurements (in the range of \mu V). Here, we present the directly detected DC current (in the range of nA) as an alternative quantity. Furthermore, we investigate the resistance of the Pt layer in the LSSE configuration. We found an influence of the test current on the resistance. The typical shape of the LSSE curve varies for increasing test currents.Comment: 4 pages, 2 figure

Longitudinal spin Seebeck effect contribution in transverse spin Seebeck effect experiments in Pt/YIG and Pt/NFO

We investigate the inverse spin Hall voltage of a 10nm thin Pt strip deposited on the magnetic insulators Y3Fe5O12 (YIG) and NiFe2O4 (NFO) with a temperature gradient in the film plane. We observe characteristics typical of the spin Seebeck effect, although we do not observe a change of sign of the voltage at the Pt strip when it is moved from hot to cold side, which is believed to be the most striking feature of the transverse spin Seebeck effect. Therefore, we relate the observed voltages to the longitudinal spin Seebeck effect generated by a parasitic out-of-plane temperature gradient, which can be simulated by contact tips of different material and heat conductivities and by tip heating. This work gives new insights into the interpretation of transverse spin Seebeck effect experiments, which are still under discussion.Comment: 6 pages, 5 figure

On static spherically symmetric solutions of the vacuum Brans-Dicke theory

It is shown that among the four classes of the static spherically symmetric solution of the vacuum Brans-Dicke theory of gravity only two are really independent. Further by matching exterior and interior (due to physically reasonable spherically symmetric matter source) scalar fields it is found that only Brans class I solution with certain restriction on solution parameters may represent exterior metric for a nonsingular massive object. The physical viability of the black hole nature of the solution is investigated. It is concluded that no physical black hole solution different from the Schwarzschild black hole is available in the Brans-Dicke theory.Comment: 15 pages, To be published in Gen. Rel. and Grav, typos in references correcte

Gene Discovery and Advances in Finger Millet [Eleusine coracana (L.) Gaertn.] Genomics—An Important Nutri-Cereal of Future

The rapid strides in molecular marker technologies followed by genomics, and next generation sequencing advancements in three major crops (rice, maize and wheat) of the world have given opportunities for their use in the orphan, but highly valuable future crops, including finger millet [Eleusine coracana (L.) Gaertn.]. Finger millet has many special agronomic and nutritional characteristics, which make it an indispensable crop in arid, semi-arid, hilly and tribal areas of India and Africa. The crop has proven its adaptability in harsh conditions and has shown resilience to climate change. The adaptability traits of finger millet have shown the advantage over major cereal grains under stress conditions, revealing it as a storehouse of important genomic resources for crop improvement. Although new technologies for genomic studies are now available, progress in identifying and tapping these important alleles or genes is lacking. RAPDs were the default choice for genetic diversity studies in the crop until the last decade, but the subsequent development of SSRs and comparative genomics paved the way for the marker assisted selection in finger millet. Resistance gene homologues from NBS-LRR region of finger millet for blast and sequence variants for nutritional traits from other cereals have been developed and used invariably. Population structure analysis studies exhibit 2-4 sub-populations in the finger millet gene pool with separate grouping of Indian and exotic genotypes. Recently, the omics technologies have been efficiently applied to understand the nutritional variation, drought tolerance and gene mining. Progress has also occurred with respect to transgenics development. This review presents the current biotechnological advancements along with research gaps and future perspective of genomic research in finger millet

Strong field gravitational lensing in scalar tensor theories

Strong field gravitational lensing in the Brans-Dicke theory has been studied. The deflection angle for photons passing very close to the photon sphere is estimated for the static spherically symmetric space-time of the theory and the position and magnification of the relativistic images are obtained. Modeling the super massive central object of the galaxy by the Brans-Dicke space-time, numerical values of different strong lensing observable are estimated. It is found that against the expectation there is no significant scalar field effect in the strong field observable lensing parameters. This observation raises question on the potentiality of the strong field lensing to discriminate different gravitational theories.Comment: 20 pages, accepted in Class. Quantum Grav., final versio