Perturbative Corrections to the Ohta-Jasnow-Kawasaki Theory of Phase-Ordering Dynamics

A perturbation expansion is considered about the Ohta-Jasnow-Kawasaki theory of phase-ordering dynamics; the non-linear terms neglected in the OJK calculation are reinstated and treated as a perturbation to the linearised equation. The first order correction term to the pair correlation function is calculated in the large-d limit and found to be of order 1/(d^2).Comment: Revtex, 27 pages including 2 figures, submitted to Phys. Rev. E, references adde

Enhancement and suppression effects resulting from information structuring in sentences

Information structuring through the use of cleft sentences increases the processing efficiency of references to elements within the scope of focus. Furthermore, there is evidence that putting certain types of emphasis on individual words not only enhances their subsequent processing, but also protects these words from becoming suppressed in the wake of subsequent information, suggesting mechanisms of enhancement and suppression. In Experiment 1, we showed that clefted constructions facilitate the integration of subsequent sentences that make reference to elements within the scope of focus, and that they decrease the efficiency with reference to elements outside of the scope of focus. In Experiment 2, using an auditory text-change-detection paradigm, we showed that focus has similar effects on the strength of memory representations. These results add to the evidence for enhancement and suppression as mechanisms of sentence processing and clarify that the effects occur within sentences having a marked focus structure

Emergent global patterns of ecosystem structure and function from a mechanistic general ecosystem model

Anthropogenic activities are causing widespread degradation of ecosystems worldwide, threatening the ecosystem services upon which all human life depends. Improved understanding of this degradation is urgently needed to improve avoidance and mitigation measures. One tool to assist these efforts is predictive models of ecosystem structure and function that are mechanistic: based on fundamental ecological principles. Here we present the first mechanistic General Ecosystem Model (GEM) of ecosystem structure and function that is both global and applies in all terrestrial and marine environments. Functional forms and parameter values were derived from the theoretical and empirical literature where possible. Simulations of the fate of all organisms with body masses between 10 µg and 150,000 kg (a range of 14 orders of magnitude) across the globe led to emergent properties at individual (e.g., growth rate), community (e.g., biomass turnover rates), ecosystem (e.g., trophic pyramids), and macroecological scales (e.g., global patterns of trophic structure) that are in general agreement with current data and theory. These properties emerged from our encoding of the biology of, and interactions among, individual organisms without any direct constraints on the properties themselves. Our results indicate that ecologists have gathered sufficient information to begin to build realistic, global, and mechanistic models of ecosystems, capable of predicting a diverse range of ecosystem properties and their response to human pressures

Children are important too: juvenile playgroups and maternal childcare in a foraging population, the Agta

Non-maternal carers (allomothers) are hypothesized to lighten the mother's workload, allowing for the specialized human life history including relatively short interbirth intervals and multiple dependent offspring. Here, using in-depth observational data on childcare provided to 78 Agta children (a foraging population in the northern Philippines; aged 0–6 years), we explore whether allomaternal childcare substitutes and decreases maternal childcare. We found that allomother caregiving was associated with reduced maternal childcare, but the substitutive effect varied depending on the source and type of care. Children-only playgroups consistently predicted a decrease in maternal childcare. While grandmothers were rarely available, their presence was negatively associated with maternal presence and childcare, and grandmothers performed similar childcare activities to mothers. These results underscore the importance of allomothering in reducing maternal childcare in the Agta. Our findings suggest that flexibility in childcare sources, including children-only playgroups, may have been the key to human life-history evolution. Overall, our results reinforce the necessity of a broad conceptualization of social support in human childcare. This article is part of the theme issue ‘Multidisciplinary perspectives on social support and maternal–child health’

Elucidation of the ebola virus VP24 cellular interactome and disruption of virus biology through targeted inhibition of host-cell protein function

Viral pathogenesis in the infected cell is a balance between antiviral responses and subversion of host-cell processes. Many viral proteins specifically interact with host-cell proteins to promote virus biology. Understanding these interactions can lead to knowledge gains about infection and provide potential targets for antiviral therapy. One such virus is Ebola, which has profound consequences for human health and causes viral hemorrhagic fever where case fatality rates can approach 90%. The Ebola virus VP24 protein plays a critical role in the evasion of the host immune response and is likely to interact with multiple cellular proteins. To map these interactions and better understand the potential functions of VP24, label-free quantitative proteomics was used to identify cellular proteins that had a high probability of forming the VP24 cellular interactome. Several known interactions were confirmed, thus placing confidence in the technique, but new interactions were also discovered including one with ATP1A1, which is involved in osmoregulation and cell signaling. Disrupting the activity of ATP1A1 in Ebola-virus-infected cells with a small molecule inhibitor resulted in a decrease in progeny virus, thus illustrating how quantitative proteomics can be used to identify potential therapeutic targets

Noroviruses subvert the core stress granule component G3BP1 to promote viral VPg-dependent translation.

Knowledge of the host factors required for norovirus replication has been hindered by the challenges associated with culturing human noroviruses. We have combined proteomic analysis of the viral translation and replication complexes with a CRISPR screen, to identify host factors required for norovirus infection. The core stress granule component G3BP1 was identified as a host factor essential for efficient human and murine norovirus infection, demonstrating a conserved function across the Norovirus genus. Furthermore, we show that G3BP1 functions in the novel paradigm of viral VPg-dependent translation initiation, contributing to the assembly of translation complexes on the VPg-linked viral positive sense RNA genome by facilitating ribosome recruitment. Our data uncovers a novel function for G3BP1 in the life cycle of positive sense RNA viruses and identifies the first host factor with pan-norovirus pro-viral activity

Channelling figurativity through narrative : the paranarrative in fiction and non-fiction

Contrary to wide-spread assumptions, metaphor in narrative is not a pre-established, extra-textual form appearing in different instances of discourse, but rather an event resulting from a strategic distribution of information in the narrative process. Hence, the appeal to conceptual cultural knowledge is to be considered as a consequence, and not as a prerequisite of metaphor interpretation. By means of the concept of the paranarrative, we highlight the rhetorical interconnectedness of metaphor with other figures of speech (such as metonymy) and we explore the narrative integration of diacritic forms of indirectness. In order to illustrate the terminology that can address these focal concerns, the paper discusses the relation between tropes and narrative, via selected examples from narrative texts (both fictional and non-fictional) written by Juli Zeh, Herta Müller, Jürgen Nieraad, and Siddhartha Mukherjee. As their common denominator, these examples channel through narrative figurative domains considered to be known intuitively to wit: personifications; iconic pars pro toto references to concentration camps; and metaphors for cancer in disease biographies

Changing how Earth System Modelling is done to provide more useful information for decision making, science and society

New details about natural and anthropogenic processes are continually added to models of the Earth system, anticipating that the increased realism will increase the accuracy of their predictions. However, perspectives differ about whether this approach will improve the value of the information the models provide to decision makers, scientists, and societies. The present bias toward increasing realism leads to a range of updated projections, but at the expense of uncertainty quantification and model tractability. This bias makes it difficult to quantify the uncertainty associated with the projections from any one model or to the distribution of projections from different models. This in turn limits the utility of climate model outputs for deriving useful information such as in the design of effective climate change mitigation and adaptation strategies or identifying and prioritizing sources of uncertainty for reduction. Here we argue that a new approach to model development is needed, focused on the delivery of information to support specific policy decisions or science questions. The central tenet of this approach is the assessment and justification of the overall balance of model detail that reflects the question posed, current knowledge, available data, and sources of uncertainty. This differs from contemporary practices by explicitly seeking to quantify both the benefits and costs of details at a systemic level, taking into account the precision and accuracy with which predictions are made when compared to existing empirical evidence. We specify changes to contemporary model development practices that would help in achieving this goal.</jats:p

Re-reading in Stylistics

Cognitive stylistics is primarily concerned with the cognitive processes – mental simulations – experienced by readers. Most cognitive stylisticians agree that experiences of reading texts are dynamic and flexible. Changes in the context of reading, our attentional focus on a given day, our extra background knowledge about the text, and so on, are all factors that contribute to our experience of a fictional world. A second reading of a text is a different experience to a first reading. As researchers begin to systematically distinguish between the ‘solitary’ and ‘social’ readings that constitute reading as a phenomenon (Peplow et al., 2016), the relationship between multiple readings and the nature of their processing become increasingly pertinent. In order to explore this relationship, firstly we examine the different ways in which re-reading has previously been discussed in stylistics, grounding our claims in an empirical analysis of articles published in key stylistics journals over the past two decades. Next, we draw on reader response data from an online questionnaire in order to assess the role of re-reading and the motivations that underpin it. Finally, we describe an exercise for the teaching of cognitive stylistics, specifically applying schema theory in literary linguistic analysis (Cook, 1994), which illustrates the need to distinguish between readings as part of an analysis. Through these three sections we argue that our experiences of texts should be considered diachronically, and propose that the different readings that make up an analysis of a text should be given greater attention in stylistic research and teaching