272 research outputs found
The Eos SAR Mission
The Eos SAR if a key component of the Eos mission. It is
currently being launched on a free flyer in parallel
with Eos-A to provide coincident measurements of the
Earth's surface over a 15 year time span. This paper
provides the latest information on the status of the Eos
SAR mission, emphasizes the SAR's role in the overall
Eos mission, and compares the Eos SAR under study to
the earlier SAR on Eos-B
FPGA-accelerated machine learning inference as a service for particle physics computing
New heterogeneous computing paradigms on dedicated hardware with increased
parallelization, such as Field Programmable Gate Arrays (FPGAs), offer exciting
solutions with large potential gains. The growing applications of machine
learning algorithms in particle physics for simulation, reconstruction, and
analysis are naturally deployed on such platforms. We demonstrate that the
acceleration of machine learning inference as a web service represents a
heterogeneous computing solution for particle physics experiments that
potentially requires minimal modification to the current computing model. As
examples, we retrain the ResNet-50 convolutional neural network to demonstrate
state-of-the-art performance for top quark jet tagging at the LHC and apply a
ResNet-50 model with transfer learning for neutrino event classification. Using
Project Brainwave by Microsoft to accelerate the ResNet-50 image classification
model, we achieve average inference times of 60 (10) milliseconds with our
experimental physics software framework using Brainwave as a cloud (edge or
on-premises) service, representing an improvement by a factor of approximately
30 (175) in model inference latency over traditional CPU inference in current
experimental hardware. A single FPGA service accessed by many CPUs achieves a
throughput of 600--700 inferences per second using an image batch of one,
comparable to large batch-size GPU throughput and significantly better than
small batch-size GPU throughput. Deployed as an edge or cloud service for the
particle physics computing model, coprocessor accelerators can have a higher
duty cycle and are potentially much more cost-effective.Comment: 16 pages, 14 figures, 2 table
Exoplanet Diversity in the Era of Space-based Direct Imaging Missions
This whitepaper discusses the diversity of exoplanets that could be detected
by future observations, so that comparative exoplanetology can be performed in
the upcoming era of large space-based flagship missions. The primary focus will
be on characterizing Earth-like worlds around Sun-like stars. However, we will
also be able to characterize companion planets in the system simultaneously.
This will not only provide a contextual picture with regards to our Solar
system, but also presents a unique opportunity to observe size dependent
planetary atmospheres at different orbital distances. We propose a preliminary
scheme based on chemical behavior of gases and condensates in a planet's
atmosphere that classifies them with respect to planetary radius and incident
stellar flux.Comment: A white paper submitted to the National Academy of Sciences Exoplanet
Science Strateg
Climates of Warm Earth-Like Planets III: Fractional Habitability from a Water Cycle Perspective
The habitable fraction of a planet's surface is important for the
detectability of surface biosignatures. The extent and distribution of
habitable areas is influenced by external parameters that control the planet's
climate, atmospheric circulation, and hydrological cycle. We explore these
issues using the ROCKE-3D General Circulation Model, focusing on terrestrial
water fluxes and thus the potential for the existence of complex life on land.
Habitability is examined as a function of insolation and planet rotation for an
Earth-like world with zero obliquity and eccentricity orbiting the Sun. We
assess fractional habitability using an aridity index that measures the net
supply of water to the land. Earth-like planets become ``superhabitable'' (a
larger habitable surface area than Earth) as insolation and day-length increase
because their climates become more equable, reminiscent of past warm periods on
Earth when complex life was abundant and widespread. The most slowly rotating,
most highly irradiated planets, though, occupy a hydrological regime unlike any
on Earth, with extremely warm, humid conditions at high latitudes but little
rain and subsurface water storage. Clouds increasingly obscure the surface as
insolation increases, but visibility improves for modest increases in rotation
period. Thus, moderately slowly rotating rocky planets with insolation near or
somewhat greater than modern Earth's appear to be promising targets for surface
characterization by a future direct imaging mission.Comment: 24 pages, 7 figures, 1 table; submitted to Ap
A mechanistic target of rapamycin complex 1/2 (mTORC1)/V-Akt murine thymoma viral oncogene homolog 1 (AKT1)/cathepsin H axis controls filaggrin expression and processing in skin, a novel mechanism for skin barrier disruption in patients with atopic dermatitis
Background Filaggrin, which is encoded by the filaggrin gene (FLG), is an important component of the skin's barrier to the external environment, and genetic defects in FLG strongly associate with atopic dermatitis (AD). However, not all patients with AD have FLG mutations. Objective We hypothesized that these patients might possess other defects in filaggrin expression and processing contributing to barrier disruption and AD, and therefore we present novel therapeutic targets for this disease. Results We describe the relationship between the mechanistic target of rapamycin complex 1/2 protein subunit regulatory associated protein of the MTOR complex 1 (RAPTOR), the serine/threonine kinase V-Akt murine thymoma viral oncogene homolog 1 (AKT1), and the protease cathepsin H (CTSH), for which we establish a role in filaggrin expression and processing. Increased RAPTOR levels correlated with decreased filaggrin expression in patients with AD. In keratinocyte cell cultures RAPTOR upregulation or AKT1 short hairpin RNA knockdown reduced expression of the protease CTSH. Skin of CTSH-deficient mice and CTSH short hairpin RNA knockdown keratinocytes showed reduced filaggrin processing, and the mouse had both impaired skin barrier function and a mild proinflammatory phenotype. Conclusion Our findings highlight a novel and potentially treatable signaling axis controlling filaggrin expression and processing that is defective in patients with AD
The Eos SAR Mission
The Eos SAR if a key component of the Eos mission. It is
currently being launched on a free flyer in parallel
with Eos-A to provide coincident measurements of the
Earth's surface over a 15 year time span. This paper
provides the latest information on the status of the Eos
SAR mission, emphasizes the SAR's role in the overall
Eos mission, and compares the Eos SAR under study to
the earlier SAR on Eos-B
Pharmaceutical integrated stress response enhancement protects oligodendrocytes and provides a potential multiple sclerosis therapeutic.
Oligodendrocyte death contributes to the pathogenesis of the inflammatory demyelinating disease multiple sclerosis (MS). Nevertheless, current MS therapies are mainly immunomodulatory and have demonstrated limited ability to inhibit MS progression. Protection of oligodendrocytes is therefore a desirable strategy for alleviating disease. Here we demonstrate that enhancement of the integrated stress response using the FDA-approved drug guanabenz increases oligodendrocyte survival in culture and prevents hypomyelination in cerebellar explants in the presence of interferon-γ, a pro-inflammatory cytokine implicated in MS pathogenesis. In vivo, guanabenz treatment protects against oligodendrocyte loss caused by CNS-specific expression of interferon-γ. In a mouse model of MS, experimental autoimmune encephalomyelitis, guanabenz alleviates clinical symptoms, which correlates with increased oligodendrocyte survival and diminished CNS CD4+ T cell accumulation. Moreover, guanabenz ameliorates relapse in relapsing-remitting experimental autoimmune encephalomyelitis. Our results provide support for a MS therapy that enhances the integrated stress response to protect oligodendrocytes against the inflammatory CNS environment
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The unequal impact of parenthood in academia
Across academia, men and women tend to publish at unequal rates. Existing explanations include the potentially unequal impact of parenthood on scholarship, but a lack of appropriate data has prevented its clear assessment. Here, we quantify the impact of parenthood on scholarship using an extensive survey of the timing of parenthood events, longitudinal publication data, and perceptions of research expectations among 3064 tenure-track faculty at 450 Ph.D.-granting computer science, history, and business departments across the United States and Canada, along with data on institution-specific parental leave policies. Parenthood explains most of the gender productivity gap by lowering the average short-term productivity of mothers, even as parents tend to be slightly more productive on average than nonparents. However, the size of productivity penalty for mothers appears to have shrunk over time. Women report that paid parental leave and adequate childcare are important factors in their recruitment and retention. These results have broad implications for efforts to improve the inclusiveness of scholarship.
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Basic science232. Certolizumab pegol prevents pro-inflammatory alterations in endothelial cell function
Background: Cardiovascular disease is a major comorbidity of rheumatoid arthritis (RA) and a leading cause of death. Chronic systemic inflammation involving tumour necrosis factor alpha (TNF) could contribute to endothelial activation and atherogenesis. A number of anti-TNF therapies are in current use for the treatment of RA, including certolizumab pegol (CZP), (Cimzia ®; UCB, Belgium). Anti-TNF therapy has been associated with reduced clinical cardiovascular disease risk and ameliorated vascular function in RA patients. However, the specific effects of TNF inhibitors on endothelial cell function are largely unknown. Our aim was to investigate the mechanisms underpinning CZP effects on TNF-activated human endothelial cells. Methods: Human aortic endothelial cells (HAoECs) were cultured in vitro and exposed to a) TNF alone, b) TNF plus CZP, or c) neither agent. Microarray analysis was used to examine the transcriptional profile of cells treated for 6 hrs and quantitative polymerase chain reaction (qPCR) analysed gene expression at 1, 3, 6 and 24 hrs. NF-κB localization and IκB degradation were investigated using immunocytochemistry, high content analysis and western blotting. Flow cytometry was conducted to detect microparticle release from HAoECs. Results: Transcriptional profiling revealed that while TNF alone had strong effects on endothelial gene expression, TNF and CZP in combination produced a global gene expression pattern similar to untreated control. The two most highly up-regulated genes in response to TNF treatment were adhesion molecules E-selectin and VCAM-1 (q 0.2 compared to control; p > 0.05 compared to TNF alone). The NF-κB pathway was confirmed as a downstream target of TNF-induced HAoEC activation, via nuclear translocation of NF-κB and degradation of IκB, effects which were abolished by treatment with CZP. In addition, flow cytometry detected an increased production of endothelial microparticles in TNF-activated HAoECs, which was prevented by treatment with CZP. Conclusions: We have found at a cellular level that a clinically available TNF inhibitor, CZP reduces the expression of adhesion molecule expression, and prevents TNF-induced activation of the NF-κB pathway. Furthermore, CZP prevents the production of microparticles by activated endothelial cells. This could be central to the prevention of inflammatory environments underlying these conditions and measurement of microparticles has potential as a novel prognostic marker for future cardiovascular events in this patient group. Disclosure statement: Y.A. received a research grant from UCB. I.B. received a research grant from UCB. S.H. received a research grant from UCB. All other authors have declared no conflicts of interes
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