Adaptation kinetics in bacterial chemotaxis

Cells of Escherichia coli, tethered to glass by a single flagellum, were subjected to constant flow of a medium containing the attractant alpha-methyl-DL-aspartate. The concentration of this chemical was varied with a programmable mixing apparatus over a range spanning the dissociation constant of the chemoreceptor at rates comparable to those experienced by cells swimming in spatial gradients. When an exponentially increasing ramp was turned on (a ramp that increases the chemoreceptor occupancy linearly), the rotational bias of the cells (the fraction of time spent spinning counterclockwise) changed rapidly to a higher stable level, which persisted for the duration of the ramp. The change in bias increased with ramp rate, i.e., with the time rate of change of chemoreceptor occupancy. This behavior can be accounted for by a model for adaptation involving proportional control, in which the flagellar motors respond to an error signal proportional to the difference between the current occupancy and the occupancy averaged over the recent past. Distributions of clockwise and counterclockwise rotation intervals were found to be exponential. This result cannot be explained by a response regular model in which transitions between rotational states are generated by threshold crossings of a regular subject to statistical fluctuation; this mechanism generates distributions with far too many long events. However, the data can be fit by a model in which transitions between rotational states are governed by first-order rate constants. The error signal acts as a bias regulator, controlling the values of these constants

Consequences of the Factorization Hypothesis in pbar p, pp, gamma p and gamma gamma Collisions

Using an eikonal analysis, we examine the validity of the factorization theorem for nucleon-nucleon, gamma p and gamma gamma collisions. As an example, using the additive quark model and meson vector dominance, we directly show that for all energies and values of the eikonal, that the factorization theorem sigma_{nn}/sigma_{gamma p} = sigma_{gamma p}/sigma_{gamma gamma} holds. We can also compute the survival probability of large rapidity gaps in high energy pbar p and pp collisions. We show that the survival probabilities are identical (at the same energy) for gamma p and gamma gamma collisions, as well as for nucleon-nucleon collisions. We further show that neither the factorization theorem nor the reaction-independence of the survival probabilities depends on the assumption of an additive quark model, but, more generally, depends on the opacity of the eikonal being independent of whether the reaction is n-n, gamma p or gamma gamma.Comment: 8 pages, Revtex, no figures. Expanded discussion, minor correction

Ground state of a confined Yukawa plasma

The ground state of an externally confined one-component Yukawa plasma is derived analytically. In particular, the radial density profile is computed. The results agree very well with computer simulations on three-dimensional spherical Coulomb crystals. We conclude in presenting an exact equation for the density distribution for a confinement potential of arbitrary geometry.Comment: 5 pages, 4 figure

Diel vertical migration of the bigeye thresher shark (Alopias superciliosus), a species possessing orbital retia mirabilia

The bigeye thresher shark (Alopias superciliosus, Lowe 1841) is one of three sharks in the family Alopiidae, which occupy pelagic, neritic, and shallow coastal waters throughout the altropics and subtropics (Gruber and Compagno, 1981; Castro, 1983). All thresher sharks possess an elongated upper caudal lobe, and the bigeye thresher shark is distinguished from the other alopiid sharks by its large upward-looking eyes and grooves on the top of the head (Bigelow and Schroeder, 1948). Our present understanding of the bigeye thresher shark is primarily based upon data derived from specimens captured in fisheries, including knowledge of its morphological features (Fitch and Craig, 1964; Stillwell and Casey, 1976; Thorpe, 1997), geographic range as far as it overlaps with fisheries (Springer, 1943; Fitch and Craig, 1964; Stillwell and Casey, 1976; Gruber and Compagno, 1981; Thorpe, 1997), age, growth and maturity (Chen et al., 1997; Liu et al., 1998), and aspects of its reproductive biology (Gilmore, 1983; Moreno and Moron, 1992; Chen et al., 1997)

Draft genome sequence of a meningitic isolate of Cronobacter sakazakii clonal complex 4, strain 8399

The Cronobacter sakazakii clonal lineage defined as clonal complex 4 (CC4), composed of nine sequence types, is associated with severe cases of neonatal meningitis. To date, only closely related C. sakazakii sequence type 4 (ST4) strains have been sequenced. C. sakazakii strain 8399, isolated from a case of neonatal meningitis, was sequenced as the first non-ST4 C. sakazakii strain

Coordination of flagella on filamentous cells of Escherichia coli

Video techniques were used to study the coordination of different flagella on single filamentous cells of Escherichia coli. Filamentous, nonseptate cells were produced by introducing a cell division mutation into a strain that was polyhook but otherwise wild type for chemotaxis. Markers for its flagellar motors (ordinary polyhook cells that had been fixed with glutaraldehyde) were attached with antihook antibodies. The markers were driven alternately clockwise and counterclockwise, at angular velocities comparable to those observed when wild-type cells are tethered to glass. The directions of rotation of different markers on the same cell were not correlated; reversals of the flagellar motors occurred asynchronously. The bias of the motors (the fraction of time spent spinning counterclockwise) changed with time. Variations in bias were correlated, provided that the motors were within a few micrometers of one another. Thus, although the directions of rotation of flagellar motors are not controlled by a common intracellular signal, their biases are. This signal appears to have a limited range

Very Luminous Carbon Stars in the Outer Disk of the Triangulum Spiral Galaxy

Stars with masses in the range from about 1.3 to 3.5 Mo pass through an evolutionary stage where they become carbon stars. In this stage, which lasts a few Myr, these stars are extremely luminous pulsating giants. They are so luminous in the near-infrared that just a few of them can double the integrated luminosity of intermediate-age (0.6 to 2 Gyr) Magellanic Cloud clusters at 2.2 microns. Astronomers routinely use such near-infrared observations to minimize the effects of dust extinction, but it is precisely in this band that carbon stars can contribute hugely. The actual contribution of carbon stars to the outer disk light of evolving spiral galaxies has not previously been morphologically investigated. Here we report new and very deep near-IR images of the Triangulum spiral galaxy M33=NGC 598, delineating spectacular arcs of carbon stars in its outer regions. It is these arcs which dominate the near-infrared m=2 Fourier spectra of M33. We present near-infrared photometry with the Hale 5-m reflector, and propose that the arcs are the signature of accretion of low metallicity gas in the outer disk of M33.Comment: 4 pages, 4 figures. Revised version submitted to A&A Letter

Optimized magneto-optical isolator designs inspired by seedlayer-free terbium iron garnets with opposite chirality

Simulations demonstrate that undoped yttrium iron garnet (YIG) seedlayers cause reduced Faraday rotation in silicon-on-insulator (SOI) waveguides with Ce-doped YIG claddings. Undoped seedlayers are required for the crystallization of the magneto-optical Ce:YIG claddings, but they diminish the interaction of the Ce:YIG with the guided modes. Therefore new magneto-optical garnets, terbium iron garnet (TIG) and bismuth-doped TIG (Bi:TIG), are introduced that can be integrated directly on Si and quartz substrates without seedlayers. The Faraday rotations of TIG and Bi:TIG films at 1550nm were measured to be +500 and -500°/cm, respectively. Simulations show that these new garnets have the potential to significantly mitigate the negative impact of the seedlayers under Ce:YIG claddings. The successful growth of TIG and Bi:TIG on low-index fused quartz inspired novel garnet-core waveguide isolator designs, simulated using finite difference time domain (FDTD) methods. These designs use alternating segments of positive and negative Faraday rotation for push-pull quasi phase matching in order to overcome birefringence in waveguides with rectangular cross-sections