Coalescence Model for Crumpled Globules Formed in Polymer Collapse

The rapid collapse of a polymer, due to external forces or changes in solvent, yields a long-lived `crumpled globule.' The conjectured fractal structure shaped by hierarchical collapse dynamics has proved difficult to establish, even with large simulations. To unravel this puzzle, we study a coarse-grained model of in-falling spherical blobs that coalesce upon contact. Distances between pairs of monomers are assigned upon their initial coalescence, and do not `equilibrate' subsequently. Surprisingly, the model reproduces quantitatively the dependence of distance on segment length, suggesting that the slow approach to scaling is related to the wide distribution of blob sizes

Topological Constraints in Directed Polymer Melts

Polymers in a melt may be subject to topological constraints, as in the example of unlinked polymer rings. How to do statistical mechanics in the presence of such constraints remains a fundamental open problem. We study the effect of topological constraints on a melt of directed polymers, using simulations of a simple quasi-2D model. We find that fixing the global topology of the melt to be trivial changes the polymer conformations drastically. Polymers of length $L$ wander in the transverse direction only by a distance of order $(\ln L)^\zeta$ with $\zeta \simeq 1.5$. This is strongly suppressed in comparison with the Brownian $L^{1/2}$ scaling which holds in the absence of the topological constraint. It is also much smaller than the predictions of standard heuristic approaches - in particular the $L^{1/4}$ of a mean-field-like `array of obstacles' model - so our results present a sharp challenge to theory. Dynamics are also strongly affected by the constraints, and a tagged monomer in an infinite system performs logarithmically slow subdiffusion in the transverse direction. To cast light on the suppression of the strands' wandering, we analyse the topological complexity of subregions of the melt: the complexity is also logarithmically small, and is related to the wandering by a power law. We comment on insights the results give for 3D melts, directed and non-directed.Comment: 4 pages + appendices, 11 figures. Published versio