Why is Wealthier Healthier?

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Optimizing Echo State Networks for Static Pattern Recognition

Static pattern recognition requires a machine to classify an object on the basis of a combination of attributes and is typically performed using machine learning techniques such as support vector machines and multilayer perceptrons. Unusually, in this study, we applied a successful time-series processing neural network architecture, the echo state network (ESN), to a static pattern recognition task. The networks were presented with clamped input data patterns, but in this work, they were allowed to run until their output units delivered a stable set of output activations, in a similar fashion to previous work that focused on the behaviour of ESN reservoir units. Our aim was to see if the short-term memory developed by the reservoir and the clamped inputs could deliver improved overall classification accuracy. The study utilized a challenging, high dimensional, real-world plant species spectroradiometry classification dataset with the objective of accurately detecting one of the world’s top 100 invasive plant species. Surprisingly, the ESNs performed equally well with both unsettled and settled reservoirs. Delivering a classification accuracy of 96.60%, the clamped ESNs outperformed three widely used machine learning techniques, namely support vector machines, extreme learning machines and multilayer perceptrons. Contrary to past work, where inputs were clamped until reservoir stabilization, it was found that it was possible to obtain similar classification accuracy (96.49%) by clamping the input patterns for just two repeats. The chief contribution of this work is that a recurrent architecture can get good classification accuracy, even while the reservoir is still in an unstable state

Movement patterns and athletic performance of leopards in the Okavango Delta

Although leopards are the most widespread of all the big cats and are known for their adaptability, they are elusive and little is known in detail about their movement and hunting energetics. We used high-resolution GPS/IMU (inertial measurement unit) collars to record position, activity and the first high-speed movement data on four male leopards in the Okavango Delta, an area with high habitat diversity and habitat fragmentation. Leopards in this study were generally active and conducted more runs during the night, with peaks in activity and number of runs in the morning and evening twilight. Runs were generally short (less than 100 m) and relatively slow (maximum speed 5.3 m s−1, mean of individual medians) compared to other large predators. Average daily travel distance was 11 km and maximum daily travel distance was 29 km. No direct correlation was found between average daily temperature and travel distance or between season and travel distance. Total daily energy requirements based on locomotor cost and basal metabolic rate varied little between individuals and over time. This study provides novel insights into movement patterns and athletic performance of leopards through quantitative high-resolution measurement of the locomotor, energetic, spatial and temporal movement characteristics. The results are unbiased by methodological and observational limitations characteristic of previous studies and demonstrate the utility of applying new technologies to field studies of elusive nocturnal species

The discovery of a novel antibiotic for the treatment of Clostridium difficile infections: a story of an effective academic-industrial partnership

Academic drug discovery is playing an increasingly important role in the identification of new therapies for a wide range of diseases. There is no one model that guarantees success. We describe here a drug discovery story where chance, the ability to capitalise on chance, and the assembling of a range of expertise, have all played important roles in the discovery and subsequent development of an antibiotic chemotype based on the bis-benzimidazole scaffold, with potency against a number of current therapeutically challenging diseases. One compound in this class, SMT19969, has recently entered Phase 2 human clinical trials for the treatment of Clostridium difficile infections

Reproducibility of creatine kinase: how useful is this measurement tool?

Establishing the reproducibility of a measurement is essential for repeated testing to ensure that any systematic change is a result of an external influence (i.e. intervention), as oppossed to normal random variation. Although some degree of error is inherent in any measure, a measurement tool should yield consistent results that do not fluctuate to an unacceptable degree from one test to another. Creatine kinase (CK) is consistently measured in the blood as a marker of exercise induced muscle damage (EIMD). However, its usefulness as a predictive tool to examine the temporal pattern, and magnitude of muscle damage has been questioned. PURPOSE:The main aim of the present study was to employ a variety of reproducibility statistics in order to examine the typical level of measurement error for CK. METHODS: Fifty (36 male, 14 female), apparently healthy participants completed three trials on three separate occasions with each trial separated by 48 - 72 h. The initial trial served as a familiarisation. During trials 2 and 3 (48 h), CK measures were obtained using standard fingerprick technique, and analysed in duplicate immediatley using a colorimetric assay procedure. Each participant completed their trials at the same time of day, following identical pre-test procedures. RESULTS: The intra-test coefficient of variation (CV) within our laboratory was 9%. Dependent t-tests indicated there was no systematic bias between trials (p = 0.82). The interdian CV displayed low reproducibility (20%). Furthermore, the 95% limits of agreement (LoA) were -69.7 to 63.5 iµ/L. However, the intraclass correlation coefficient (ICC) was 0.90, which can be clasified as displaying ‘high’ reproducibility. CONCLUSION: The interdian CV demonstrates that under identical resting conditions (48 h apart), CK displays inherent low absoulte reproducibility, which may obscure a true experimental effect. However, interpretation of the ICC, suggests that CK has high relative reproducibility. The high range of observed CK values is thought to have increased the size of the correlation. Subsequently, an indivdual change in CK following EIMD may not be indicative of the magnitude of damage, and may simply be a result of the inherent variation (e.g. biological). Therefore, it is advised that caution should be taken when using CK within experimental research, and as an indication of when an athlete has recovered, and is able to recommence training

The cytokine response to a 30 min downhill run

ISEI Abstract – 7 The cytokine response to a 30 min downhill run L TAYLOR1, CHRISMAS BCR1, CARROLL S2, SMITH A3, PEMBERTON P3, SIEGLER JC4 and MIDGLEY AW5. 1 Applied Sport and Exercise Physiology (ASEP) & Muscle Cellular and Molecular Physiology (MCMP) research groups, Institute of Sport and Physical Activity Research (ISPAR), Department of Sport & Exercise Sciences, University of Bedfordshire, Bedford, UK. 2Department of Sport, Health & Exercise Science, The University of Hull, Hull, UK. 3Department of Clinical Biochemistry, Central Manchester Foundation Trust, Manchester, UK. 4School of Science & Health, University of Western Sydney, Sydney, Australia. 5Department of Sport & Physical Activity, Edge Hill University, Ormskirk, UK. ABSTRACT Eccentric exercise has been ubiquitously shown to result in exericse induced muscle damage (EIMD), accompanied with delayed onset muscle soreness (DOMS). Although eccentric exercise may induce greater neuromuscular adaptation, functional performance may be impaired, and soreness may persist for several days following this type of exercise. This is primarily thought to be due to structural damage to the muscle fibres. In addition to the mechanical theory of EIMD, it has been suggested that an increased inflammatory response may be associated with DOMS. Furthermore, it is possible that the inflammatory response may play a role in mediating recovery, and adaptation following EIMD. However, the effects of EIMD on markers of inflammation have produced inconsistent results. PURPOSE: The main aim of the present study was to investigate the cytokine response to a 30 min downhill run. METHODS: Fifty (36 male, 14 female), apparently healthy participants performed a 30 min downhill run (-12.5%, 70% Vmax). Interleukin 6 (IL-6), high sensitivity C reactive protein (hs-CRP), and tumor necrosis factor alpha (TNF-α) were measured at 1 h, 24 h and 48 h post downhill run. Additionally, isometric maximum voluntary contraction (MVC), and perceived muscle soreness were measured at 24 h and 48 h post downhill run. RESULTS: Detectable levles of TNF-α were only present in three participants, and therefore, these data were excluded from the analysis. There was no significant difference in IL-6 or hs-CRP at any time point (p \u3e 0.10). However, there was a significant decrease in MVC (p ≤ 0.001). On average MVC decreased by 11% and 8% in the dominant and non-dominant leg at 24 h and 48 h respectively. Furthermore, there was a significant increase in muscle soreness (p \u3c 0.001). On average soreness increased by 49 mm and 51 mm 24 h and 48 h post downhill run. CONCLUSION: The significant increase in muscle soreness in the present study is indicative of EIMD. Furthermore, the significant decrement in MVC at 24 h and 48 h post downhill run, demonstrates that neuromuscular function was impaired. The lack of any significant increase in the cytokine response, supports the theory that mechanical damage is the primary mechanism associated with the EIMD and DOMS phenomenon. Nevertheless, when interpreting these results it is important to consider that due to the sampling times employed in the present study, an inflammatory response may have been missed

Gap junction proteins and their role in spinal cord injury

© 2015 Tonkin, Mao, O'Carroll, Nicholson, Green, Gorrie and Moalem-Taylor. Gap junctions are specialized intercellular communication channels that are formed by two hexameric connexin hemichannels, one provided by each of the two adjacent cells. Gap junctions and hemichannels play an important role in regulating cellular metabolism, signaling, and functions in both normal and pathological conditions. Following spinal cord injury (SCI), there is damage and disturbance to the neuronal elements of the spinal cord including severing of axon tracts and rapid cell death. The initial mechanical disruption is followed by multiple secondary cascades that cause further tissue loss and dysfunction. Recent studies have implicated connexin proteins as playing a critical role in the secondary phase of SCI by propagating death signals through extensive glial networks. In this review, we bring together past and current studies to outline the distribution, changes and roles of various connexins found in neurons and glial cells, before and in response to SCI. We discuss the contribution of pathologically activated connexin proteins, in particular connexin 43, to functional recovery and neuropathic pain, as well as providing an update on potential connexin specific pharmacological agents to treat SCI

Pentoxifylline as an adjunct therapy in children with cerebral malaria

BACKGROUND: Pentoxifylline (PTX) affects many processes that may contribute to the pathogenesis of severe malaria and it has been shown to reduce the duration of coma in children with cerebral malaria. This pilot study was performed to assess pharmacokinetics, safety and efficacy of PTX in African children with cerebral malaria. METHODS: Ten children admitted to the high dependency unit of the Kilifi District Hospital in Kenya with cerebral malaria (Blantyre coma score of 2 or less) received quinine plus a continuous infusion of 10 mg/kg/24 hours PTX for 72 hours. Five children were recruited as controls and received normal saline instead of PTX. Plasma samples were taken for PTX and tumour necrosis factor (TNF) levels. Blantyre Coma Score, parasitemia, hematology and vital signs were assessed 4 hourly. RESULTS: One child (20%) in the control group died, compared to four children (40%) in the PTX group. This difference was not significant (p = 0.60). Laboratory parameters and clinical data were comparable between groups. TNF levels were lower in children receiving PTX. CONCLUSIONS: The small sample size does not permit definitive conclusions, but the mortality rate was unexpectedly high in the PTX group

Orientation cues for high-flying nocturnal insect migrants: do turbulence-induced temperature and velocity fluctuations indicate the mean wind flow?

Migratory insects flying at high altitude at night often show a degree of common alignment, sometimes with quite small angular dispersions around the mean. The observed orientation directions are often close to the downwind direction and this would seemingly be adaptive in that large insects could add their self-propelled speed to the wind speed, thus maximising their displacement in a given time. There are increasing indications that high-altitude orientation may be maintained by some intrinsic property of the wind rather than by visual perception of relative ground movement. Therefore, we first examined whether migrating insects could deduce the mean wind direction from the turbulent fluctuations in temperature. Within the atmospheric boundary-layer, temperature records show characteristic ramp-cliff structures, and insects flying downwind would move through these ramps whilst those flying crosswind would not. However, analysis of vertical-looking radar data on the common orientations of nocturnally migrating insects in the UK produced no evidence that the migrants actually use temperature ramps as orientation cues. This suggests that insects rely on turbulent velocity and acceleration cues, and refocuses attention on how these can be detected, especially as small-scale turbulence is usually held to be directionally invariant (isotropic). In the second part of the paper we present a theoretical analysis and simulations showing that velocity fluctuations and accelerations felt by an insect are predicted to be anisotropic even when the small-scale turbulence (measured at a fixed point or along the trajectory of a fluid-particle) is isotropic. Our results thus provide further evidence that insects do indeed use turbulent velocity and acceleration cues as indicators of the mean wind direction