1,202 research outputs found

    Counting the Invisible Man: Black Males and the 2010 Census

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    iCount was a campaign to increase the expected low participation rates of black males in the 2010 census. This briefing paper provides an overview of that effort and lessons learned that could guide strategy for increased participation in the 2020 census

    Nonlinear diffusion equations as asymptotic limits of Cahn-Hilliard systems

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    An asymptotic limit of a class of Cahn-Hilliard systems is investigated to obtain a general nonlinear diffusion equation. The target diffusion equation may reproduce a number of well-known model equations: Stefan problem, porous media equation, Hele-Shaw profile, nonlinear diffusion of singular logarithmic type, nonlinear diffusion of Penrose-Fife type, fast diffusion equation and so on. Namely, by setting the suitable potential of the Cahn-Hilliard systems, all of these problems can be obtained as limits of the Cahn-Hilliard related problems. Convergence results and error estimates are proved

    Chlamydia Hijacks ARF GTPases To Coordinate Microtubule Posttranslational Modifications and Golgi Complex Positioning.

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    The intracellular bacterium Chlamydia trachomatis develops in a parasitic compartment called the inclusion. Posttranslationally modified microtubules encase the inclusion, controlling the positioning of Golgi complex fragments around the inclusion. The molecular mechanisms by which Chlamydia coopts the host cytoskeleton and the Golgi complex to sustain its infectious compartment are unknown. Here, using a genetically modified Chlamydia strain, we discovered that both posttranslationally modified microtubules and Golgi complex positioning around the inclusion are controlled by the chlamydial inclusion protein CT813/CTL0184/InaC and host ARF GTPases. CT813 recruits ARF1 and ARF4 to the inclusion membrane, where they induce posttranslationally modified microtubules. Similarly, both ARF isoforms are required for the repositioning of Golgi complex fragments around the inclusion. We demonstrate that CT813 directly recruits ARF GTPases on the inclusion membrane and plays a pivotal role in their activation. Together, these results reveal that Chlamydia uses CT813 to hijack ARF GTPases to couple posttranslationally modified microtubules and Golgi complex repositioning at the inclusion.IMPORTANCEChlamydia trachomatis is an important cause of morbidity and a significant economic burden in the world. However, how Chlamydia develops its intracellular compartment, the so-called inclusion, is poorly understood. Using genetically engineered Chlamydia mutants, we discovered that the effector protein CT813 recruits and activates host ADP-ribosylation factor 1 (ARF1) and ARF4 to regulate microtubules. In this context, CT813 acts as a molecular platform that induces the posttranslational modification of microtubules around the inclusion. These cages are then used to reposition the Golgi complex during infection and promote the development of the inclusion. This study provides the first evidence that ARF1 and ARF4 play critical roles in controlling posttranslationally modified microtubules around the inclusion and that Chlamydia trachomatis hijacks this novel function of ARF to reposition the Golgi complex

    How to name atoms in phosphates, polyphosphates, their derivatives and mimics, and transition state analogues for enzyme-catalysed phosphoryl transfer reactions (IUPAC Recommendations 2016)

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    Procedures are proposed for the naming of individual atoms, P, O, F, N, and S in phosphate esters, amidates, thiophosphates, polyphosphates, their mimics, and analogues of transition states for enzyme-catalyzed phosphoryl transfer reactions. Their purpose is to enable scientists in very different fields, e.g. biochemistry, biophysics, chemistry, computational chemistry, crystallography, and molecular biology, to share standard protocols for the labelling of individual atoms in complex molecules. This will facilitate clear and unambiguous descriptions of structural results, as well as scientific intercommunication concerning them. At the present time, perusal of the Protein Data Bank (PDB) and other sources shows that there is a limited degree of commonality in nomenclature, but a large measure of irregularity in more complex structures. The recommendations described here adhere to established practice as closely as possible, in particular to IUPAC and IUBMB recommendations and to "best practice" in the PDB, especially to its atom labelling of amino acids, and particularly to Cahn-Ingold-Prelog rules for stereochemical nomenclature. They are designed to work in complex enzyme sites for binding phosphates but also to have utility for non-enzymatic systems. Above all, the recommendations are designed to be easy to comprehend and user-friendly

    On a Dirichlet problem with (p,q)(p,q)-Laplacian and parametric concave-convex nonlinearity

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    A homogeneous Dirichlet problem with (p,q)(p,q)-Laplace differential operator and reaction given by a parametric pp-convex term plus a qq-concave one is investigated. A bifurcation-type result, describing changes in the set of positive solutions as the parameter λ>0\lambda>0 varies, is proven. Since for every admissible λ\lambda the problem has a smallest positive solution uˉλ\bar u_{\lambda}, both monotonicity and continuity of the map λuˉλ \lambda \mapsto \bar u_{\lambda} are studied.Comment: 12 pages, comments are welcom

    The Allen-Cahn equation with dynamic boundary conditions and mass constraints

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    The Allen-Cahn equation, coupled with dynamic boundary conditions, has recently received a good deal of attention. The new issue of this paper is the setting of a rather general mass constraint which may involve either the solution inside the domain or its trace on the boundary. The system of nonlinear partial differential equations can be formulated as variational inequality. The presence of the constraint in the evolution process leads to additional terms in the equation and the boundary condition containing a suitable Lagrange multiplier. A well-posedness result is proved for the related initial value problem.Comment: Key words: Allen-Cahn equation, dynamic boundary condition, mass constraint, variational inequality, Lagrange multiplie

    On the Caginalp phase-field systems with two temperatures and the Maxwell–Cattaneo law

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    This is the peer reviewed version of the following article: Miranville, A., and Quintanilla, R. (2016) On the Caginalp phase-field systems with two temperatures and the Maxwell–Cattaneo law. Math. Meth. Appl. Sci., 39: 4385–4397, which has been published in final form at http://dx.doi.org/10.1002/mma.3867. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-ArchivingOur aim in this paper is to study generalizations of the nonconserved and conserved Caginalp phase-¿eld systems based on the Maxwell–Cattaneo law with two temperatures for heat conduction. In particular, we obtain well-posedness results and study the dissipativity of the associated solution operators.Peer ReviewedPostprint (author's final draft

    On the Caginalp system with dynamic boundary conditions and singular potentials

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    summary:This article is devoted to the study of the Caginalp phase field system with dynamic boundary conditions and singular potentials. We first show that, for initial data in H2H^2, the solutions are strictly separated from the singularities of the potential. This turns out to be our main argument in the proof of the existence and uniqueness of solutions. We then prove the existence of global attractors. In the last part of the article, we adapt well-known results concerning the Łojasiewicz inequality in order to prove the convergence of solutions to steady states

    On a diffuse interface model for tumour growth with non-local interactions and degenerate mobilities

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    We study a non-local variant of a diffuse interface model proposed by Hawkins--Darrud et al. (2012) for tumour growth in the presence of a chemical species acting as nutrient. The system consists of a Cahn--Hilliard equation coupled to a reaction-diffusion equation. For non-degenerate mobilities and smooth potentials, we derive well-posedness results, which are the non-local analogue of those obtained in Frigeri et al. (European J. Appl. Math. 2015). Furthermore, we establish existence of weak solutions for the case of degenerate mobilities and singular potentials, which serves to confine the order parameter to its physically relevant interval. Due to the non-local nature of the equations, under additional assumptions continuous dependence on initial data can also be shown.Comment: 28 page

    A DDFV method for a Cahn-Hilliard/Stokes phase field model with dynamic boundary conditions

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    International audienceIn this paper we propose a "Discrete Duality Finite Volume" method (DDFV for short) for the diffuse interface modelling of incompressible flows. This numerical method is, conservative, robust and is able to handle general geometries and meshes. The model we study couples the Cahn-Hilliard equation and the unsteady Stokes equation and is endowed with particular nonlinear boundary conditions called dynamic boundary conditions. To implement the scheme for this model we have to define new discrete consistent DDFV operators that allows an energy stable coupling between both discrete equations. We are thus able to obtain the existence of a family of solutions satisfying a suitable energy inequality, even in the case where a first order time-splitting method between the two subsystems is used. We illustrate various properties of such a model with some numerical results
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