Genetic monitoring detects an overlooked cryptic species and reveals the diversity and distribution of three invasive Rattus congeners in South Africa

Background: South Africa's long and extensive trade activity has ensured ample opportunities for exotic species introduction. Whereas the rich biodiversity of endemic southern African fauna has been the focus of many studies, invasive vertebrates are generally overlooked despite potential impacts on biodiversity, health and agriculture. Genetic monitoring of commensal rodents in South Africa which uncovered the presence of Rattus tanezumi, a South-East Asian endemic not previously known to occur in Africa, provided the impetus for expanded studies on all invasive Rattus species present. Results: To this end, intensified sampling at 28 South African localities and at one site in Swaziland, identified 149 Rattus specimens. Cytochrome b gene sequencing revealed the presence of two R. tanezumi, seven R. rattus and five R. norvegicus haplotypes in south Africa. Phylogenetic results were consistent with a single, recent R. tanezumi introduction and indicated that R. norvegicus and R. rattus probably became established following at least two and three independent introductions, respectively. Intra- and inter-specific diversity was highest in informal human settlements, with all three species occurring at a single metropolitan township site. Rattus norvegicus and R. rattus each occurred sympatrically with R. tanezumi at one and five sites, respectively. Karyotyping of selected R. rattus and R. tanezumi individuals identified diploid numbers consistent with those reported previously for these cryptic species. Ordination of bioclimatic variables and MaxEnt ecological niche modelling confirmed that the bioclimatic niche occupied by R. tanezumi in south Africa was distinct from that occupied in its naturalised range in south-east Asia suggesting that factors other than climate may influence the distribution of this species. Conclusions: This study has highlighted the value of genetic typing for detecting cryptic invasive species, providing historical insights into introductions and for directing future sampling. The apparent ease with which a cryptic species can become established signals the need for broader implementation of genetic monitoring programmes. In addition to providing baseline data and potentially identifying high-risk introduction routes, the predictive power of ecological niche modelling is enhanced when species records are genetically verified

Towards a monitoring system of the sea state based on microseism and machine learning

In this work, we exploited the ubiquitous seismic noise generated by energy transfer from the sea to the solid Earth (called microseism) to infer the significant wave height data, with the aim of developing a microseism-based monitoring system of the Sicily Channel. We used a combined approach based on statistical analysis and machine learning by using seismic and sea state data (provided by the hindcast maps), recorded between 2018 and 2021.Through spectral and amplitude analysis, we observed that microseism was influenced by the conditions of the seas surrounding Sicily. Correlation analysis demonstrates that microseism mostly originates from sources located up to 400 km from the coastlines. Moreover, employing machine learning algorithms, we successfully reconstruct spatial and temporal sea wave distributions using microseism data. Among the tested methods, the Random Forest algorithm yields the best results, with an R2 value of 0.89 and a mean prediction error of about 0.21 m

Integration of microseism, wavemeter buoy, HF radar and hindcast data to analyze the Mediterranean cyclone Helios

In this work, we study a Mediterranean cyclone, Helios, which took place during 9-11 February 2023 in the southeastern part of Sicily and Malta, by a multiparametric approach combining microseism results with sea state and meteorological data provided by wavemeter buoy, HF radar, hindcast maps and satellite SEVIRI images. The sub-tropical system Helios caused heavy rainfall, strong wind gusts and violent storm surges with significant wave heights greater than 5 m. We deal with the relationships between such a system and the features of microseism (the most continuous and ubiquitous seismic signal on Earth) in terms of spectral content, space-time variation of the amplitude and source locations tracked by means of two methods (amplitude-based grid search and array techniques). By comparing the location of the microseism sources and the area affected by significant storm surges derived from sea state data, we note that the microseism location results are in agreement with the real position of the storm surges. In addition, we are able to obtain the seismic signature of Helios using a method that exploits the coherence of continuous seismic noise. Hence, we show how an innovative monitoring system of the Mediterranean cyclones can be designed by integrating microseism information with other techniques routinely used to study meteorological phenomena

The Stromboli geophysical experiment. Preliminary report on wide angle refraction seismics and morphobathymetry of Stromboli Island (Southern Tyrrhenian Sea, Italy) based on integrated offshore-onshore data acquisition (Cruise STR06 R/V URANIA)

Cruise STR06 on R/V Urania was performed in the framework of the ”INGV - DPC V2 - Monitoring and research activity at Stromboli and Panarea - Unit V2/03”, and resulted as a joint initiative between CNR (IAMC, Napoli and ISMAR, Bologna), INGV (Roma2, Osservatorio Vesuviano, Catania, Gibilmanna-CNT), University of Firenze and DPC, aiming to produce a seismic tomography of the Stromboli volcano, South Eastern Tyrrhenian Sea [Fig.1], and have insights into its 2-D structure and magma chambers. Cruise work plan was designed to extend at sea the existing Seismographic Network, complemented by several mobile stations, and to generate seismic shots by air-gun tuned array. 10 OBS were deployed around Stromboli, along the NE, SE and SW flanks of the volcano, according to (a) morphobathymetric analysis of available and newly produced DTMs, (b) modeling and (c) optimal lineaments with on-land recording stations. Seismic shots along radial and circle lines were obtained by a 4 GI-GUN 105+105 C.I. tuned array, while the absolute shot time was recorded at the resolution of ms. A request for ship time of R/V Uraniawas presented by IAMC, and a period of 7 days, including 2 day of transit was assigned to the project by CNR and scheduled for late November 2006. Cruise STR06 started in Naples 2006-11-27 and ended in Naples 2006-12-06. This paper reports the shipboard activities during the cruise STR06 on R/V Urania and some preliminary results regarding also the onshore activities carried out in order to perform the Stromboli geophysical experiment. A description of the ship, equipment and their usage is given thereinafter, along with details of the general settings, performances and some scientific and technical results.Istituto di Scienze Marine, ISMAR-CNR, BolognaPublished3.6. Fisica del vulcanismo1.4. TTC - Sorveglianza sismologica delle aree vulcaniche attiveope