Automated data reduction workflows for astronomy

Data from complex modern astronomical instruments often consist of a large number of different science and calibration files, and their reduction requires a variety of software tools. The execution chain of the tools represents a complex workflow that needs to be tuned and supervised, often by individual researchers that are not necessarily experts for any specific instrument. The efficiency of data reduction can be improved by using automatic workflows to organise data and execute the sequence of data reduction steps. To realize such efficiency gains, we designed a system that allows intuitive representation, execution and modification of the data reduction workflow, and has facilities for inspection and interaction with the data. The European Southern Observatory (ESO) has developed Reflex, an environment to automate data reduction workflows. Reflex is implemented as a package of customized components for the Kepler workflow engine. Kepler provides the graphical user interface to create an executable flowchart-like representation of the data reduction process. Key features of Reflex are a rule-based data organiser, infrastructure to re-use results, thorough book-keeping, data progeny tracking, interactive user interfaces, and a novel concept to exploit information created during data organisation for the workflow execution. Reflex includes novel concepts to increase the efficiency of astronomical data processing. While Reflex is a specific implementation of astronomical scientific workflows within the Kepler workflow engine, the overall design choices and methods can also be applied to other environments for running automated science workflows.Comment: 12 pages, 7 figure

An Overview of the Rotational Behavior of Metal--Poor Stars

The present paper describes the behavior of the rotational velocity in metal--poor stars ([Fe/H]<-0.5 dex) in different evolutionary stages, based on Vsini values from the literature. Our sample is comprised of stars in the field and some Galactic globular clusters, including stars on the main sequence, the red giant branch (RGB), and the horizontal branch (HB). The metal--poor stars are, mainly, slow rotators, and their Vsini distribution along the HR diagram is quite homogeneous. Nevertheless, a few moderate to high values of Vsini are found in stars located on the main sequence and on the HB. We show that the overall distribution of Vsini values is basically independent of metallicity for the stars in our sample. In particular, the fast-rotating main sequence stars in our sample present similar rotation rates as their metal-rich counterparts, suggesting that some of them may actually be fairly young, in spite of their low metallicity, or else that at least some of them would be better classified as blue straggler stars. We do not find significant evidence of evolution in Vsini values as a function of position on the RGB; in particular, we do not confirm previous suggestions that stars close to the RGB tip rotate faster than their less evolved counterparts. While the presence of fast rotators among moderately cool blue HB stars has been suggested to be due to angular momentum transport from a stellar core that has retained significant angular momentum during its prior evolution, we find that any such transport mechanisms must likely operate very fast as the star arrives on the zero-age HB (ZAHB), since we do not find a link between evolution off the ZAHB and Vsini values. We present an extensive tabulation of all quantities discussed in this paper, including rotation velocities, temperatures, gravitieComment: 22 pages, 10 figure

The ESO supernovae type Ia progenitor survey (SPY) : The radial velocities of 644 DA white dwarfs

Accepted for publication in A&A. 59 pages.Close double degenerate binaries are one of the favoured progenitor channels for type Ia supernovae, but it is unclear how many suitable systems there are in the Galaxy. We report results of a large radial velocity survey for double degenerate (DD) binaries using the UVES spectrograph at the ESO VLT (ESO SN Ia Progenitor surveY - SPY). Exposures taken at different epochs are checked for radial velocity shifts indicating close binary systems. We observed 689 targets classified as DA (displaying hydrogen-rich atmospheres), of which 46 turned out to possess a cool companion. We measured radial velocities (RV) of the remaining 643 DA white dwarfs. We managed to secure observations at two or more epochs for 625 targets, supplemented by eleven objects meeting our selection criteria from literature. The data reduction and analysis methods applied to the survey data are described in detail. The sample contains 39 double degenerate binaries, only four of which were previously known. 20 are double-lined systems, in which features from both components are visible, the other 19 are single-lined binaries. We provide absolute RVs transformed to the heliocentric system suitable for kinematic studies. Our sample is large enough to sub-divide by mass: 16 out of 44 low mass targets (0.45 Msun are double. Although the detected fraction amongst the low mass objects (36.4 +/- 7.3%) is significantly higher than for the higher-mass, carbon/oxygen-core dominated part of the sample (3.9 +/- 0.8%), it is lower than the detection efficiency based upon companion star masses >= 0.05 Msun. This suggests either companion stars of mass <0.05 Msun, or that some of the low mass white dwarfs are single.Peer reviewe

Single and Composite Hot Subdwarf Stars in the Light of 2MASS Photometry

Utilizing the Two Micron All Sky Survey (2MASS) Second Incremental Data Release Catalog, we have retrieved near-IR magnitudes for several hundred hot subdwarfs (sdO and sdB stars) drawn from the "Catalogue of Spectroscopically Identified Hot Subdwarfs" (Kilkenny, Heber, & Drilling 1988, 1992). This sample size greatly exceeds that of previous studies of hot subdwarfs. Examining 2MASS photometry alone or in combination with visual photometry (Johnson BV or Stromgren uvby) available in the literature, we show that it is possible to identify hot subdwarf stars that exhibit atypically red IR colors that can be attributed to the presence of an unresolved late type companion. Utilizing this large sample, we attempt for the first time to define an approximately volume limited sample of hot subdwarfs. We discuss the considerations, biases, and difficulties in defining such a sample. We find that, of the hot subdwarfs in Kilkenny et al., about 40% in a magnitude limited sample have colors that are consistent with the presence of an unresolved late type companion. Binary stars are over-represented in a magnitude limited sample. In an approximately volume limited sample the fraction of composite-color binaries is about 30%.Comment: to appear in Sept 2003 AJ, 41 pages total, 12 figures, 2 tables are truncated (full tables to appear in electronic journal or available by request

Making FORS2 fit for exoplanet observations (again)

For about three years, it was known that precision spectrophotometry with FORS2 suffered from systematic errors that made quantitative observations of planetary transits impossible. We identified the Longitudinal Atmospheric Dispersion Compensator (LADC) as the most likely culprit, and therefore engaged in a project to exchange the LADC prisms with the uncoated ones from FORS1. This led to a significant improvement in the depth of FORS2 zero points, a reduction in the systematic noise, and should make FORS2 again competitive for transmission spectroscopy of exoplanets.Comment: To appear in the March issue of the ESO Messenge

Hot Horizontal-Branch Stars: The Ubiquitous Nature of the "Jump" in Stromgren u, Low Gravities, and the Role of Radiative Levitation of Metals

A "jump" in the BHB distribution in the V, u-y CMD was recently detected in the GC M13. It is morphologically best characterized as a discontinuity in u, u-y, with stars in the range 11,500<Teff(K)<20,000 deviating systematically from (in the sense of appearing brighter and/or hotter than) canonical ZAHBs. We present u, y photometry of 14 GCs obtained with 3 different telescopes (Danish, NOT, HST) and demonstrate that the u-jump is present in every GC whose HB extends beyond 11,500K, irrespective of [Fe/H], mixing history on the RGB, and other GC parameters. We suggest that the u-jump is a ubiquitous feature, intrinsic to all HB stars hotter than 11,500K. We draw a parallel between the ubiquitous nature of the u-jump and the problem of low measured gravities among BHB stars. We note that the "logg-jump" occurs over the same temperature range as the u-jump, and that it occurs in every metal-poor GC for which gravities have been determined--irrespective of [Fe/H], mixing history on the RGB, or any other GC parameters. Furthermore, the u-jump and the logg-jump are connected on a star-by-star basis. The two are likely different manifestations of the same physical phenomenon. We present a framework which may simultaneously account for the u-jump and the logg-jump. Reviewing spectroscopic data for several field BHB stars, as well as two BHB stars in the GC NGC 6752, we find evidence that radiative levitation of heavy elements takes place at Teff>11,500 K, dramatically enhancing their abundances in the atmospheres of BHB stars in the "critical" temperature region. Model atmospheres taking diffusion effects into account are badly needed, and will likely lead to better overall agreement between canonical evolutionary theory and observations for BHB stars.Comment: ApJ, Main Journal, accepted. Contains several changes and update

Distances to Galactic high-velocity clouds. I. Cohen Stream, complex GCP, cloud g1

The high- and intermediate-velocity interstellar clouds (HVCs/IVCs) are tracers of energetic processes in and around the Milky Way. Clouds with near-solar metallicity about one kpc above the disk trace the circulation of material between disk and halo (the Galactic Fountain). The Magellanic Stream consists of gas tidally extracted from the SMC, tracing the dark matter potential of the Milky Way. Several other HVCs have low-metallicity and appear to trace the continuing accretion of infalling intergalactic gas. These assertions are supported by the metallicities (0.1 to 1 solar) measured for about ten clouds in the past decade. Direct measurements of distances to HVCs have remained elusive, however. In this paper we present four new distance brackets, using VLT observations of interstellar \CaII H and K absorption toward distant Galactic halo stars. We derive distance brackets of 5.0 to 11.7 kpc for the Cohen Stream (likely to be an infalling low-metallicity cloud), 9.8 to 15.1 kpc for complex GCP (also known as the Smith Cloud or HVC40-15+100 and with still unknown origin), 1.0 to 2.7 kpc for an IVC that appears associated with the return flow of the Fountain in the Perseus Arm, and 1.8 to 3.8 kpc for cloud g1, which appears to be in the outflow phase of the Fountain. Our measurements further demonstrate that the Milky Way is accreting substantial amounts of gaseous material, which influences the Galaxy's current and future dynamical and chemical evolution.Comment: Accepted by Ap

HST Snaphot Study of Variable Stars in Globular Clusters: Inner Region of NGC 6441

[Abridged] We present the results of a Hubble Space Telescope snapshot program to survey the inner region of the globular cluster NGC 6441 for its variable stars. A total of 57 variable stars was found including 38 RR Lyrae stars, 6 Population II Cepheids, and 12 long period variables. Of the RR Lyrae stars observed in this survey, 26 are pulsating in the fundamental mode with a mean period of 0.753d and 12 are first-overtone mode pulsators with a mean period of 0.365d. These values match up very well with those found in ground-based surveys. Combining all the available data for NGC 6441, we find mean periods of 0.759d and 0.375d for the RRab and RRc stars, respectively. We also find that the RR Lyrae in this survey are located in the same regions of a period-amplitude diagram as those found in ground-based surveys. Although NGC 6441 is a metal-rich globular cluster, its RR Lyrae more closely resemble those in Oosterhoff type II globular clusters. However, even compared to typical Oosterhoff type II systems, the mean period of its RRab stars is unusually long. We also derived I-band period-luminosity relations for the RR Lyrae stars. Of the six Population II Cepheids, five are of W Virginis type and one is a BL Herculis variable stars. This makes NGC 6441, along with NGC 6388, the most metal-rich globular cluster known to contain these types of variable stars. Another variable, V118, may also be a Population II Cepheid given its long period and its separation in magnitude from the RR Lyrae stars. We argue that there does not appear to be a change in the period-luminosity relation slope between the BL Herculis and W Virginis stars, but that a change of slope does occur when the RV Tauri stars are added to the period-luminosity relation.Comment: 28 pages, including 9 figures and 8 tables, emulateapj5/apjfonts style. Accepted by the Astronomical Journal. Approximate publication date September 2003. We recommend the interested reader to download the preprint with full-resolution figures, which can be found at http://www.astro.puc.cl/~mcatelan/Pritzl.zi

A Catalog of Spectroscopically Confirmed White Dwarfs from the Sloan Digital Sky Survey Data Release 4

We present a catalog of 9316 spectroscopically confirmed white dwarfs from the Sloan Digital Sky Survey Data Release 4. We have selected the stars through photometric cuts and spectroscopic modeling, backed up by a set of visual inspections. Roughly 6000 of the stars are new discoveries, roughly doubling the number of spectroscopically confirmed white dwarfs. We analyze the stars by performing temperature and surface gravity fits to grids of pure hydrogen and helium atmospheres. Among the rare outliers are a set of presumed helium-core DA white dwarfs with estimated masses below 0.3 Msun, including two candidates that may be the lowest masses yet found. We also present a list of 928 hot subdwarfs.Comment: Accepted by the Astrophysical Journal Supplements, 25 pages, 24 figures, LaTeX. The electronic catalog, as well as diagnostic figures and links to the spectra, is available at http://das.sdss.org/wdcat/dr4

MRI in multiple myeloma : a pictorial review of diagnostic and post-treatment findings

Magnetic resonance imaging (MRI) is increasingly being used in the diagnostic work-up of patients with multiple myeloma. Since 2014, MRI findings are included in the new diagnostic criteria proposed by the International Myeloma Working Group. Patients with smouldering myeloma presenting with more than one unequivocal focal lesion in the bone marrow on MRI are considered having symptomatic myeloma requiring treatment, regardless of the presence of lytic bone lesions. However, bone marrow evaluation with MRI offers more than only morphological information regarding the detection of focal lesions in patients with MM. The overall performance of MRI is enhanced by applying dynamic contrast-enhanced MRI and diffusion weighted imaging sequences, providing additional functional information on bone marrow vascularization and cellularity. This pictorial review provides an overview of the most important imaging findings in patients with monoclonal gammopathy of undetermined significance, smouldering myeloma and multiple myeloma, by performing a 'total' MRI investigation with implications for the diagnosis, staging and response assessment. Main message aEuro cent Conventional MRI diagnoses multiple myeloma by assessing the infiltration pattern. aEuro cent Dynamic contrast-enhanced MRI diagnoses multiple myeloma by assessing vascularization and perfusion. aEuro cent Diffusion weighted imaging evaluates bone marrow composition and cellularity in multiple myeloma. aEuro cent Combined morphological and functional MRI provides optimal bone marrow assessment for staging. aEuro cent Combined morphological and functional MRI is of considerable value in treatment follow-up