1,005 research outputs found
Nonlinear flexural vibrations of thin-walled circular cylinders
Nonlinear flexural vibration analysis using Galerkin method in thin-walled circular cylinder
Vibration measurement by pulse differential holographic interferometry
Technique measures structural deformation of materials subjected to wide range of temperatures and other environmental conditions. Effects of convection currents are eliminated by operating a pulsed laser in double pulse mode that exposes hologram twice in quick succession
Applications of holography to vibrations, transient response, and wave propagation
Applications of holography to vibrations, transient response, and wave propagatio
Fast Ensemble Smoothing
Smoothing is essential to many oceanographic, meteorological and hydrological
applications. The interval smoothing problem updates all desired states within
a time interval using all available observations. The fixed-lag smoothing
problem updates only a fixed number of states prior to the observation at
current time. The fixed-lag smoothing problem is, in general, thought to be
computationally faster than a fixed-interval smoother, and can be an
appropriate approximation for long interval-smoothing problems. In this paper,
we use an ensemble-based approach to fixed-interval and fixed-lag smoothing,
and synthesize two algorithms. The first algorithm produces a linear time
solution to the interval smoothing problem with a fixed factor, and the second
one produces a fixed-lag solution that is independent of the lag length.
Identical-twin experiments conducted with the Lorenz-95 model show that for lag
lengths approximately equal to the error doubling time, or for long intervals
the proposed methods can provide significant computational savings. These
results suggest that ensemble methods yield both fixed-interval and fixed-lag
smoothing solutions that cost little additional effort over filtering and model
propagation, in the sense that in practical ensemble application the additional
increment is a small fraction of either filtering or model propagation costs.
We also show that fixed-interval smoothing can perform as fast as fixed-lag
smoothing and may be advantageous when memory is not an issue
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Baseline T cell dysfunction by single cell network profiling in metastatic breast cancer patients.
BackgroundWe previously reported the results of a multicentric prospective randomized trial of chemo-refractory metastatic breast cancer patients testing the efficacy of two doses of TGFβ blockade during radiotherapy. Despite a lack of objective responses to the combination, patients who received a higher dose of TGFβ blocking antibody fresolimumab had a better overall survival when compared to those assigned to lower dose (hazard ratio of 2.73, p = 0.039). They also demonstrated an improved peripheral blood mononuclear cell (PBMC) counts and increase in the CD8 central memory pool. We performed additional analysis on residual PBMC using single cell network profiling (SCNP).MethodsThe original trial randomized metastatic breast cancer patients to either 1 or 10 mg/kg of fresolimumab, every 3 weeks for 5 cycles, combined with radiotherapy to a metastatic site at week 1 and 7 (22.5 Gy given in 3 doses of 7.5 Gy). Trial immune monitoring results were previously reported. In 15 patients with available residual blood samples, additional functional studies were performed, and compared with data obtained in parallel from seven healthy female donors (HD): SCNP was applied to analyze T cell receptor (TCR) modulated signaling via CD3 and CD28 crosslinking and measurement of evoked phosphorylation of AKT and ERK in CD4 and CD8 T cell subsets defined by PD-1 expression.ResultsAt baseline, a significantly higher level of expression (p < 0.05) of PD-L1 was identified in patient monocytes compared to HD. TCR modulation revealed dysfunction of circulating T-cells in patient baseline samples as compared to HD, and this was more pronounced in PD-1+ cells. Treatment with radiotherapy and fresolimumab did not resolve this dyfunctional signaling. However, in vitro PD-1 blockade enhanced TCR signaling in patient PD-1+ T cells and not in PD-1- T cells or in PD-1+ T cells from HD.ConclusionsFunctional T cell analysis suggests that baseline T cell functionality is hampered in metastatic breast cancer patients, at least in part mediated by the PD-1 signaling pathway. These preliminary data support the rationale for investigating the possible beneficial effects of adding PD-1 blockade to improve responses to TGFβ blockade and radiotherapy.Trial registrationNCT01401062
Morphing Ensemble Kalman Filters
A new type of ensemble filter is proposed, which combines an ensemble Kalman
filter (EnKF) with the ideas of morphing and registration from image
processing. This results in filters suitable for nonlinear problems whose
solutions exhibit moving coherent features, such as thin interfaces in wildfire
modeling. The ensemble members are represented as the composition of one common
state with a spatial transformation, called registration mapping, plus a
residual. A fully automatic registration method is used that requires only
gridded data, so the features in the model state do not need to be identified
by the user. The morphing EnKF operates on a transformed state consisting of
the registration mapping and the residual. Essentially, the morphing EnKF uses
intermediate states obtained by morphing instead of linear combinations of the
states.Comment: 17 pages, 7 figures. Added DDDAS references to the introductio
Variational data assimilation for the initial-value dynamo problem
The secular variation of the geomagnetic field as observed at the Earth's surface results from the complex magnetohydrodynamics taking place in the fluid core of the Earth. One way to analyze this system is to use the data in concert with an underlying dynamical model of the system through the technique of variational data assimilation, in much the same way as is employed in meteorology and oceanography. The aim is to discover an optimal initial condition that leads to a trajectory of the system in agreement with observations. Taking the Earth's core to be an electrically conducting fluid sphere in which convection takes place, we develop the continuous adjoint forms of the magnetohydrodynamic equations that govern the dynamical system together with the corresponding numerical algorithms appropriate for a fully spectral method. These adjoint equations enable a computationally fast iterative improvement of the initial condition that determines the system evolution. The initial condition depends on the three dimensional form of quantities such as the magnetic field in the entire sphere. For the magnetic field, conservation of the divergence-free condition for the adjoint magnetic field requires the introduction of an adjoint pressure term satisfying a zero boundary condition. We thus find that solving the forward and adjoint dynamo system requires different numerical algorithms. In this paper, an efficient algorithm for numerically solving this problem is developed and tested for two illustrative problems in a whole sphere: one is a kinematic problem with prescribed velocity field, and the second is associated with the Hall-effect dynamo, exhibiting considerable nonlinearity. The algorithm exhibits reliable numerical accuracy and stability. Using both the analytical and the numerical techniques of this paper, the adjoint dynamo system can be solved directly with the same order of computational complexity as that required to solve the forward problem. These numerical techniques form a foundation for ultimate application to observations of the geomagnetic field over the time scale of centuries
Inverse Problems in a Bayesian Setting
In a Bayesian setting, inverse problems and uncertainty quantification (UQ)
--- the propagation of uncertainty through a computational (forward) model ---
are strongly connected. In the form of conditional expectation the Bayesian
update becomes computationally attractive. We give a detailed account of this
approach via conditional approximation, various approximations, and the
construction of filters. Together with a functional or spectral approach for
the forward UQ there is no need for time-consuming and slowly convergent Monte
Carlo sampling. The developed sampling-free non-linear Bayesian update in form
of a filter is derived from the variational problem associated with conditional
expectation. This formulation in general calls for further discretisation to
make the computation possible, and we choose a polynomial approximation. After
giving details on the actual computation in the framework of functional or
spectral approximations, we demonstrate the workings of the algorithm on a
number of examples of increasing complexity. At last, we compare the linear and
nonlinear Bayesian update in form of a filter on some examples.Comment: arXiv admin note: substantial text overlap with arXiv:1312.504
On the importance of the heterogeneity assumption in the characterization of reservoir geomechanical properties
The geomechanical analysis of a highly compartmentalized reservoir is performed to simulate
the seafloor subsidence due to gas production. The available observations over the hydrocarbon
reservoir consist of bathymetric surveys carried out before and at the end of a 10-yr
production life. The main goal is the calibration of the reservoir compressibility cM, that is,
the main geomechanical parameter controlling the surface response. Two conceptual models
are considered: in one (i) cM varies only with the depth and the vertical effective stress
(heterogeneity due to lithostratigraphic variability); in another (ii) cM varies also in the horizontal
plane, that is, it is spatially distributed within the reservoir stratigraphic units. The latter
hypothesis accounts for a possible partitioning of the reservoir due to the presence of sealing
faults and thrusts that suggests the idea of a block heterogeneous system with the number of
reservoir blocks equal to the number of uncertain parameters. The method applied here relies
on an ensemble-based data assimilation (DA) algorithm (i.e. the ensemble smoother, ES),
which incorporates the information from the bathymetric measurements into the geomechanical
model response to infer and reduce the uncertainty of the parameter cM. The outcome from
conceptual model (i) indicates that DA is effective in reducing the cM uncertainty. However,
the maximum settlement still remains underestimated, while the areal extent of the subsidence
bowl is overestimated. We demonstrate that the selection of the heterogeneous conceptual
model (ii) allows to reproduce much better the observations thus removing a clear bias of
the model structure. DA allows significantly reducing the cM uncertainty in the five blocks
(out of the seven) characterized by large volume and large pressure decline. Conversely, the
assimilation of land displacements only partially constrains the prior cM uncertainty in the
reservoir blocks marginally contributing to the cumulative seafloor subsidence, that is, blocks
with low pressure
Variation in beliefs about 'fracking' between the UK and US
In decision-making on the politically-contentious issue of unconventional gas development, the UK Government and European Commission are attempting to learn from the US experience. Although economic, environmental, and health impacts and regulatory contexts have been compared cross-nationally, public perceptions and their antecedents have not. We conducted similar online panel surveys of national samples of UK and US residents simultaneously in September 2014 to compare public perceptions and beliefs affecting such perceptions. The US sample was more likely to associate positive impacts with development (i.e., production of clean energy, cheap energy, and advancing national energy security). The UK sample was more likely to associate negative impacts (i.e., water contamination, higher carbon emissions, and earthquakes). Multivariate analyses reveal divergence cross-nationally in the relationship between beliefs about impacts and support/opposition – especially for beliefs about energy security. People who associated shale gas development with increased energy security in the UK were over three times more likely to support development than people in the US with this same belief. We conclude with implications for policy and communication, discussing communication approaches that could be successful cross-nationally and policy foci to which the UK might need to afford more attention in its continually evolving regulatory environment
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