176 research outputs found
How to Display Group Information on Node-Link Diagrams: An Evaluation
We present the results of evaluating four techniques for displaying group or cluster information overlaid on node-link diagrams: node coloring, GMap, BubbleSets, and LineSets. The contributions of the paper are three fold. First, we present quantitative results and statistical analyses of data from an online study in which approximately 800 subjects performed 10 types of group and network tasks in the four evaluated visualizations. Specifically, we show that BubbleSets is the best alternative for tasks involving group membership assessment; that visually encoding group information over basic node-link diagrams incurs an accuracy penalty of about 25 percent in solving network tasks; and that GMap's use of prominent group labels improves memorability. We also show that GMap's visual metaphor can be slightly altered to outperform BubbleSets in group membership assessment. Second, we discuss visual characteristics that can explain the observed quantitative differences in the four visualizations and suggest design recommendations. This discussion is supported by a small scale eye-tracking study and previous results from the visualization literature. Third, we present an easily extensible user study methodology
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What Google Maps can do for biomedical data dissemination: examples and a design study
BACKGROUND: Biologists often need to assess whether unfamiliar datasets warrant the time investment required for more detailed exploration. Basing such assessments on brief descriptions provided by data publishers is unwieldy for large datasets that contain insights dependent on specific scientific questions. Alternatively, using complex software systems for a preliminary analysis may be deemed as too time consuming in itself, especially for unfamiliar data types and formats. This may lead to wasted analysis time and discarding of potentially useful data.
RESULTS: We present an exploration of design opportunities that the Google Maps interface offers to biomedical data visualization. In particular, we focus on synergies between visualization techniques and Google Maps that facilitate the development of biological visualizations which have both low-overhead and sufficient expressivity to support the exploration of data at multiple scales. The methods we explore rely on displaying pre-rendered visualizations of biological data in browsers, with sparse yet powerful interactions, by using the Google Maps API. We structure our discussion around five visualizations: a gene co-regulation visualization, a heatmap viewer, a genome browser, a protein interaction network, and a planar visualization of white matter in the brain. Feedback from collaborative work with domain experts suggests that our Google Maps visualizations offer multiple, scale-dependent perspectives and can be particularly helpful for unfamiliar datasets due to their accessibility. We also find that users, particularly those less experienced with computer use, are attracted by the familiarity of the Google Maps API. Our five implementations introduce design elements that can benefit visualization developers.
CONCLUSIONS: We describe a low-overhead approach that lets biologists access readily analyzed views of unfamiliar scientific datasets. We rely on pre-computed visualizations prepared by data experts, accompanied by sparse and intuitive interactions, and distributed via the familiar Google Maps framework. Our contributions are an evaluation demonstrating the validity and opportunities of this approach, a set of design guidelines benefiting those wanting to create such visualizations, and five concrete example visualizations
Fauxvea: Crowdsourcing Gaze Location Estimates for Visualization Analysis Tasks
We present the design and evaluation of a method for estimating gaze locations during the analysis of static visualizations using crowdsourcing. Understanding gaze patterns is helpful for evaluating visualizations and user behaviors, but traditional eye-tracking studies require specialized hardware and local users. To avoid these constraints, we developed a method called Fauxvea, which crowdsources visualization tasks on the Web and estimates gaze fixations through cursor interactions without eye-tracking hardware. We ran experiments to evaluate how gaze estimates from our method compare with eye-tracking data. First, we evaluated crowdsourced estimates for three common types of information visualizations and basic visualization tasks using Amazon Mechanical Turk (MTurk). In another, we reproduced findings from a previous eye-tracking study on tree layouts using our method on MTurk. Results from these experiments show that fixation estimates using Fauxvea are qualitatively and quantitatively similar to eye tracking on the same stimulus-task pairs. These findings suggest that crowdsourcing visual analysis tasks with static information visualizations could be a viable alternative to traditional eye-tracking studies for visualization research and design
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Eye Tracking Support for Visual Analytics Systems
Visual analytics (VA) research provides helpful solutions for interactive visual data analysis when exploring large and complex datasets. Due to recent advances in eye tracking technology, promising opportunities arise to extend these traditional VA approaches. Therefore, we discuss foundations for eye tracking support in VA systems. We first review and discuss the structure and range of typical VA systems. Based on a widely used VA model, we present five comprehensive examples that cover a wide range of usage scenarios. Then, we demonstrate that the VA model can be used to systematically explore how concrete VA systems could be extended with eye tracking, to create supportive and adaptive analytics systems. This allows us to identify general research and application opportunities, and classify them into research themes. In a call for action, we map the road for future research to broaden the use of eye tracking and advance visual analytics
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Erratum: Consortium biology in immunology: The perspective from the Immunological Genome Project
SEVERAL ISSUES REGARDING THE CONSERVATION AND PROTECTION OF VULNERABLE PSAMMOPHYLOUS SPECIES POLYGONUM MARITIMUML. AND SILENE THYMIFOLIASIBTH. ET SM. AT THE ROMANIAN BLACK SEA COAST
The phenomenon of vegetation dynamics and the fragile balance of the coastalecosystems and also the large number of endangered plant species from these areas represent a permanent challenge to which many specialists have to respond. In this paper we present some issues regarding the ecology, chorology, current conservation status of the species populations within their specific habitats related to the main factors of anthropic and natural impact that affect the populations of the studied plant species and identification and description of measures that can betaken for their conservation and protection. By means of the results obtain through out this study, we present the current status of Polygonum maritimum and Silene thymifolia, as well as their habitats, specific to the Romanian Black Sea coastal area
Revisited experimental comparison of node-link and matrix representations
Visualizing network data is applicable in domains such as biology, engineering, and social sciences. We report the results of a study comparing the effectiveness of the two primary techniques for showing network data: node-link diagrams and adjacency matrices. Specifically, an evaluation with a large number of online participants revealed statistically significant differences between the two visualizations. Our work adds to existing research in several ways. First, we explore a broad spectrum of network tasks, many of which had not been previously evaluated. Second, our study uses a large dataset, typical of many real-life networks not explored by previous studies. Third, we leverage crowdsourcing to evaluate many tasks with many participants
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Interactive Visual Analytics for Local Decarbonisation Planning: Empowering Policy-Aligned Scenario Exploration
Developing equitable and effective decarbonisation plans is a critical challenge for UK local authorities, who must balance complex technical, social, and economic factors. While computational models can propose optimal solutions based on a single objective, they often fail to account for the nuanced trade-offs and competing priorities inherent in public policy. We address this with a visual analytics system designed to support a human-in-the-loop planning process. Our primary contributions are threefold: (i) a modular, component-based planning paradigm that makes the construction of complex, multi-objective strategies cognitively manageable; (ii) a multi-scale visualisation framework that uses a model-driven glyph design to represent multivariate and temporal data uniformly across geographic scales, enabling fair and just assessment; and (iii) a tightlyintegrated workflow that allows planners to iteratively explore data, compose interventions, simulate outcomes, and refine their strategies in real-time. We demonstrate through an application scenario how our system empowers planners to move beyond monolithic optimisation and engage in a transparent, evidence-based dialogue with their data, ultimately supporting the creation of more robust and equitable decarbonisation plans
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