A growth walk model for estimating the canonical partition function of Interacting Self Avoiding Walk

We have explained in detail why the canonical partition function of Interacting Self Avoiding Walk (ISAW), is exactly equivalent to the configurational average of the weights associated with growth walks, such as the Interacting Growth Walk (IGW), if the average is taken over the entire genealogical tree of the walk. In this context, we have shown that it is not always possible to factor the the density of states out of the canonical partition function if the local growth rule is temperature-dependent. We have presented Monte Carlo results for IGWs on a diamond lattice in order to demonstrate that the actual set of IGW configurations available for study is temperature-dependent even though the weighted averages lead to the expected thermodynamic behavior of Interacting Self Avoiding Walk (ISAW).Comment: Revised version consisting of 12 pages (RevTeX manuscript, plus three .eps figure files); A few sentences in the second paragraph on Page 4 are rewritten so as to make the definition of the genealogical tree, ${\cal Z}_N$, clearer. Also, the second equality of Eq.(1) on Page 4, and its corresponding statement below have been remove

Lattice Gauge Fields Topology Uncovered by Quaternionic sigma-model Embedding

We investigate SU(2) gauge fields topology using new approach, which exploits the well known connection between SU(2) gauge theory and quaternionic projective sigma-models and allows to formulate the topological charge density entirely in terms of sigma-model fields. The method is studied in details and for thermalized vacuum configurations is shown to be compatible with overlap-based definition. We confirm that the topological charge is distributed in localized four dimensional regions which, however, are not compatible with instantons. Topological density bulk distribution is investigated at different lattice spacings and is shown to possess some universal properties.Comment: revtex4, 19 pages (24 ps figures included); replaced to match the published version, to appear in PRD; minor changes, references adde

³¹P Saturation Transfer and Phosphocreatine Imaging in the Monkey Brain

³¹P magnetic resonance imaging with chemical-shift discrimination by selective excitation has been employed to determine the phosphocreatine (PCr) distribution in the brains of three juvenile macaque monkeys. PCr images were also obtained while saturating the resonance of the {gamma}-phosphate of ATP, which allowed the investigation of the chemical exchange between PCr and the {gamma}-phosphate of ATP catalyzed by creatine kinase. Superposition of the PCr images over the proton image of the same monkey brain revealed topological variations in the distribution of PCr and creatine kinase activity. PCr images were also obtained with and without visual stimulation. In two out of four experiments, an apparently localized decrease in PCr concentration was noted in visual cortex upon visual stimulation. This result is interpreted in terms of a possible role for the local ADP concentration in stimulating the accompanying metabolic response

Lifting of Ir{100} reconstruction by CO adsorption: An ab initio study

The adsorption of CO on unreconstructed and reconstructed Ir{100} has been studied, using a combination of density functional theory and thermodynamics, to determine the relative stability of the two phases as a function of CO coverage, temperature and pressure. We obtain good agreement with experimentaldata. At zero temperature, the (1X5) reconstruction becomes less stable than the unreconstructed (1X1) surface when the CO coverage exceeds a critical value of 0.09 ML. The interaction between CO molecules is found to be repulsive on the reconstructed surface, but attractive on the unreconstructed, explaining the experimental observation of high CO coverage on growing (1X1) islands. At all temperatures and pressures, we find only two possible stable states: 0.05 ML CO c(2X2) overlayer on the (1X1) substrate, and the clean (1$\times$5) reconstructed surface.Comment: 31 page

Geometric Phase in Eigenspace Evolution of Invariant and Adiabatic Action Operators

The theory of geometric phase is generalized to a cyclic evolution of the eigenspace of an invariant operator with $N$-fold degeneracy. The corresponding geometric phase is interpreted as a holonomy inherited from the universal connection of a Stiefel U(N)-bundle over a Grassmann manifold. Most significantly, for an arbitrary initial state, this geometric phase captures the inherent geometric feature of the state evolution. Moreover, the geometric phase in the evolution of the eigenspace of an adiabatic action operator is also addressed, which is elaborated by a pullback U(N)-bundle. Several intriguing physical examples are illustrated.Comment: Added Refs. and corrected typos; 4 page

Metagenomic microbial community profiling using unique clade-specific marker genes

Metagenomic shotgun sequencing data can identify microbes populating a microbial community and their proportions, but existing taxonomic profiling methods are inefficient for increasingly large datasets. We present an approach that uses clade-specific marker genes to unambiguously assign reads to microbial clades more accurately and >50× faster than current approaches. We validated MetaPhlAn on terabases of short reads and provide the largest metagenomic profiling to date of the human gu

Two-Dimensional Magnetic Resonance Tomographic Microscopy using Ferromagnetic Probes

We introduce the concept of computerized tomographic microscopy in magnetic resonance imaging using the magnetic fields and field gradients from a ferromagnetic probe. We investigate a configuration where a two-dimensional sample is under the influence of a large static polarizing field, a small perpendicular radio-frequency field, and a magnetic field from a ferromagnetic sphere. We demonstrate that, despite the non-uniform and non-linear nature of the fields from a microscopic magnetic sphere, the concepts of computerized tomography can be applied to obtain proper image reconstruction from the original spectral data by sequentially varying the relative sample-sphere angular orientation. The analysis shows that the recent proposal for atomic resolution magnetic resonance imaging of discrete periodic crystal lattice planes using ferromagnetic probes can also be extended to two-dimensional imaging of non-crystalline samples with resolution ranging from micrometer to Angstrom scales.Comment: 9 pages, 11 figure

Sticky Spheres, Entropy barriers and Non-equilibrium phase transitions

A sticky spheres model to describe slow dynamics of a non-equilibrium system is proposed. The dynamical slowing down is due to the presence of entropy barriers. We present an exact mean field analysis of the model and demonstrate that there is a non-equilibrium phase transition from an exponential cluster size distribution to a powerlaw.Comment: 10pages text and 2 figure

A Carleman type theorem for proper holomorphic embeddings

In 1927, Carleman showed that a continuous, complex-valued function on the real line can be approximated in the Whitney topology by an entire function restricted to the real line. In this paper, we prove a similar result for proper holomorphic embeddings. Namely, we show that a proper \cC^r embedding of the real line into \C^n can be approximated in the strong \cC^r topology by a proper holomorphic embedding of \C into \C^n

Variational principles for involutive systems of vector fields

In many relevant cases -- e.g., in hamiltonian dynamics -- a given vector field can be characterized by means of a variational principle based on a one-form. We discuss how a vector field on a manifold can also be characterized in a similar way by means of an higher order variational principle, and how this extends to involutive systems of vector fields.Comment: 31 pages. To appear in International Journal of Geometric Methods in Modern Physics (IJGMMP