High-Velocity Clouds in the Nearby Spiral Galaxy M 83

We present deep HI 21-cm and optical observations of the face-on spiral galaxy M 83 obtained as part of a project to search for high-velocity clouds (HVCs) in nearby galaxies. Anomalous-velocity neutral gas is detected toward M 83, with 5.6x10^7 Msolar of HI contained in a disk rotating 40-50 km/s more slowly in projection than the bulk of the gas. We interpret this as a vertically extended thick disk of neutral material, containing 5.5% of the total HI within the central 8 kpc. Using an automated source detection algorithm to search for small-scale HI emission features, we find eight distinct, anomalous-velocity HI clouds with masses ranging from 7x10^5 to 1.5x10^7 Msolar and velocities differing by up to 200 km/s compared to the HI disk. Large on-disk structures are coincident with the optical spiral arms, while unresolved off-disk clouds contain no diffuse optical emission down to a limit of 27 r' mag per square arcsec. The diversity of the thick HI disk and larger clouds suggests the influence of multiple formation mechanisms, with a galactic fountain responsible for the slowly-rotating disk and on-disk discrete clouds, and tidal effects responsible for off-disk cloud production. The mass and kinetic energy of the HI clouds are consistent with the mass exchange rate predicted by the galactic fountain model. If the HVC population in M 83 is similar to that in our own Galaxy, then the Galactic HVCs must be distributed within a radius of less than 25 kpc.Comment: 30 pages, 23 figures; accepted for publication in ApJ. Some figures have been altered to reduce their siz

Head-Tail Clouds: Drops to Probe the Diffuse Galactic Halo

A head-tail high-velocity cloud (HVC) is a neutral hydrogen halo cloud that appears to be interacting with the diffuse halo medium as evident by its compressed head trailed by a relatively diffuse tail. This paper presents a sample of 116 head-tail HVCs across the southern sky (d < 2 deg) from the HI Parkes All Sky Survey (HIPASS) HVC catalog, which has a spatial resolution of 15.5 arcmin (45 pc at 10 kpc) and a sensitivity of N_HI=2 x 10^(18) cm^(-2) (5 sigma). 35% of the HIPASS compact and semi-compact HVCs (CHVCs and :HVCs) can be classified as head-tail clouds from their morphology. The clouds have typical masses of 730 M_sun at 10 kpc (26,000 M_sun at 60 kpc) and the majority can be associated with larger HVC complexes given their spatial and kinematic proximity. This proximity, together with their similar properties to CHVCs and :HVCs without head-tail structure, indicate the head-tail clouds have short lifetimes, consistent with simulation predictions. Approximately half of the head-tail clouds can be associated with the Magellanic System, with the majority in the region of the Leading Arm with position angles pointing in the general direction of the movement of the Magellanic System. The abundance in the Leading Arm region is consistent with this feature being closer to the Galactic disk than the Magellanic Stream and moving through a denser halo medium. The head-tail clouds will feed the multi-phase halo medium rather than the Galactic disk directly and provide additional evidence for a diffuse Galactic halo medium extending to at least the distance of the Magellanic Clouds.Comment: MNRAS Accepted, 10 figures, 7 in colo

Westerbork HI observations of high-velocity clouds near M31 and M33

We have undertaken high-resolution follow-up of a sample of high velocity HI clouds apparently associated with M31. Our sample was chosen from the population of high-velocity clouds (HVCs) detected out to 50 kpc projected radius of the Andromeda Galaxy by Thilker et al. (2004) with the Green Bank Telescope. Nine pointings were observed with the Westerbork Synthesis Radio Telescope to determine the physical parameters of these objects and to find clues to their origin. One additional pointing was directed at a similar object near M33. At 2' resolution we detect 16 individual HVCs around M31 and 1 HVC near M33 with typical HI masses of a few times 10^5 solar masses and sizes of the order of 1 kpc. Estimates of the dynamical and virial masses of some of the HVCs indicate that they are likely gravitationally dominated by additional mass components such as dark matter or ionised gas. Twelve of the clouds are concentrated in an area of only 1 by 1 degree at a projected separation of less than 15 kpc from the disk of M31. This HVC complex has a rather complicated morphological and kinematical structure and partly overlaps with the giant stellar stream of M31, suggesting a tidal origin. Another detected feature is in close proximity, in both position and velocity, with NGC 205, perhaps also indicative of tidal processes. Other HVCs in our survey are isolated and might represent primordial, dark-matter dominated clouds.Comment: 18 pages, 16 figures, accepted for publication in Astronomy & Astrophysic

Ongoing Galactic Accretion: Simulations and Observations of Condensed Gas in Hot Halos

Ongoing accretion onto galactic disks has been recently theorized to progress via the unstable cooling of the baryonic halo into condensed clouds. These clouds have been identified as analogous to the High-Velocity Clouds (HVCs) observed in HI in our Galaxy. Here we compare the distribution of HVCs observed around our own Galaxy and extra-planar gas around the Andromeda galaxy to these possible HVC analogs in a simulation of galaxy formation that naturally generates these condensed clouds. We find a very good correspondence between these observations and the simulation, in terms of number, angular size, velocity distribution, overall flux and flux distribution of the clouds. We show that condensed cloud accretion only accounts for ~ 0.2 M_solar / year of the current overall Galactic accretion in the simulations. We also find that the simulated halo clouds accelerate and become more massive as they fall toward the disk. The parameter space of the simulated clouds is consistent with all of the observed HVC complexes that have distance constraints, except the Magellanic Stream which is known to have a different origin. We also find that nearly half of these simulated halo clouds would be indistinguishable from lower-velocity gas and that this effect is strongest further from the disk of the galaxy, thus indicating a possible missing population of HVCs. These results indicate that the majority of HVCs are consistent with being infalling, condensed clouds that are a remnant of Galaxy formation.Comment: 10 pages, 6 figures, ApJ Accepted. Some changes to techniqu

Picoradian deflection measurement with an interferometric quasi-autocollimator using weak value amplification

We present an "interferometric quasi-autocollimator" that employs weak value amplification to measure angular deflections of a target mirror. The device has been designed to be insensitive to all translations of the target. We present a conceptual explanation of the amplification effect used by the device. An implementation of the device demonstrates sensitivities better than 10 picoradians per root hertz between 10 and 200 hertz.Comment: To be published in Optics Letter

Geometrodynamical Distances to the Galaxy's Hydrogen Streams

We present a geometrodynamical method for determining distances to orbital streams of HI gas in the Galaxy. The method makes use of our offset from the Galactic centre and assumes that the gas comprising the stream nearly follows a planar orbit about the Galactic centre. We apply this technique to the Magellanic Stream and determine the distances to all points along it; a consistency check shows that the angular momentum is approximately constant. Applying this technique to the Large Magellanic Cloud itself gives an independent distance which agrees within its accuracy of around 10%. Relaxing the demand for exact conservation of energy and angular momentum at all points along the stream allows for an increase in orbital period between the lagging end and the front end led by the Magellanic Clouds. Similar methods are applicable to other long streams of high-velocity clouds, provided they also nearly follow planar orbits; these would allow otherwise unknown distances to be determined.Comment: 9 pages, 7 figures; typos corrected after being accepted by MNRA

Beyond Tryptophan Synthase: Identification of Genes That Contribute to Chlamydia trachomatis Survival during Gamma Interferon-Induced Persistence and Reactivation

Chlamydia trachomatis can enter a viable but nonculturable state in vitro termed persistence. A common feature of C. trachomatis persistence models is that reticulate bodies fail to divide and make few infectious progeny until the persistence-inducing stressor is removed. One model of persistence that has relevance to human disease involves tryptophan limitation mediated by the host enzyme indoleamine 2,3-dioxygenase, which converts l-tryptophan to N-formylkynurenine. Genital C. trachomatis strains can counter tryptophan limitation because they encode a tryptophan-synthesizing enzyme. Tryptophan synthase is the only enzyme that has been confirmed to play a role in interferon gamma (IFN-γ)-induced persistence, although profound changes in chlamydial physiology and gene expression occur in the presence of persistence-inducing stressors. Thus, we screened a population of mutagenized C. trachomatis strains for mutants that failed to reactivate from IFN-γ-induced persistence. Six mutants were identified, and the mutations linked to the persistence phenotype in three of these were successfully mapped. One mutant had a missense mutation in tryptophan synthase; however, this mutant behaved differently from previously described synthase null mutants. Two hypothetical genes of unknown function, ctl0225 and ctl0694, were also identified and may be involved in amino acid transport and DNA damage repair, respectively. Our results indicate that C. trachomatis utilizes functionally diverse genes to mediate survival during and reactivation from persistence in HeLa cells

Carbon assimilation strategies in ultrabasic groundwater: clues from the integrated study of a serpentinization-influenced aquifer

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Seyler, L. M., Brazelton, W. J., McLean, C., Putman, L. I., Hyer, A., Kubo, M. D. Y., Hoehler, T., Cardace, D., & Schrenk, M. O. . Carbon assimilation strategies in ultrabasic groundwater: clues from the integrated study of a serpentinization-influenced aquifer. mSystems, 5(2), (2020): e00607-00619, doi: 10.1128/mSystems.00607-19.Serpentinization is a low-temperature metamorphic process by which ultramafic rock chemically reacts with water. Such reactions provide energy and materials that may be harnessed by chemosynthetic microbial communities at hydrothermal springs and in the subsurface. However, the biogeochemistry mediated by microbial populations that inhabit these environments is understudied and complicated by overlapping biotic and abiotic processes. We applied metagenomics, metatranscriptomics, and untargeted metabolomics techniques to environmental samples taken from the Coast Range Ophiolite Microbial Observatory (CROMO), a subsurface observatory consisting of 12 wells drilled into the ultramafic and serpentinite mélange of the Coast Range Ophiolite in California. Using a combination of DNA and RNA sequence data and mass spectrometry data, we found evidence for several carbon fixation and assimilation strategies, including the Calvin-Benson-Bassham cycle, the reverse tricarboxylic acid cycle, the reductive acetyl coenzyme A (acetyl-CoA) pathway, and methylotrophy, in the microbial communities inhabiting the serpentinite-hosted aquifer. Our data also suggest that the microbial inhabitants of CROMO use products of the serpentinization process, including methane and formate, as carbon sources in a hyperalkaline environment where dissolved inorganic carbon is unavailable.We thank McLaughlin Reserve, in particular Paul Aigner and Cathy Koehler, for hosting sampling at CROMO and providing access to the wells, A. Daniel Jones and Anthony Schilmiller for their advice regarding metabolite extraction and mass spectrometry, Elizabeth Kujawinski for her guidance in metabolomics data analysis and interpretation, and Julia McGonigle, Christopher Thornton, and Katrina Twing for assistance with metagenomic and computational analyses