Polynomial Fusion Rings of Logarithmic Minimal Models

We identify quotient polynomial rings isomorphic to the recently found fundamental fusion algebras of logarithmic minimal models.Comment: 18 page

Multiple Schramm-Loewner evolutions for conformal field theories with Lie algebra symmetries

We provide multiple Schramm-Loewner evolutions (SLEs) to describe the scaling limit of multiple interfaces in critical lattice models possessing Lie algebra symmetries. The critical behavior of the models is described by Wess-Zumino-Witten (WZW) models. Introducing a multiple Brownian motion on a Lie group as well as that on the real line, we construct the multiple SLE with additional Lie algebra symmetries. The connection between the resultant SLE and the WZW model can be understood via SLE martingales satisfied by the correlation functions in the WZW model. Due to interactions among SLE traces, these Brownian motions have drift terms which are determined by partition functions for the corresponding WZW model. As a concrete example, we apply the formula to the su(2)k-WZW model. Utilizing the fusion rules in the model, we conjecture that there exists a one-to-one correspondence between the partition functions and the topologically inequivalent configurations of the SLE traces. Furthermore, solving the Knizhnik-Zamolodchikov equation, we exactly compute the probabilities of occurrence for certain configurations (i.e. crossing probabilities) of traces for the triple SLE.Comment: 21 pages, 8 figures, typos corrected, references added, published versio

gl(2∣2)gl(2|2) Current Superalgebra and Non-unitary Conformal Field Theory

Motivated by application of current superalgebras in the study of disordered systems such as the random XY and Dirac models, we investigate $gl(2|2)$ current superalgebra at general level $k$. We construct its free field representation and corresponding Sugawara energy-momentum tensor in the non-standard basis. Three screen currents of the first kind are also presented.Comment: LaTex file 11 page

A spatial model of autocatalytic reactions

Biological cells with all of their surface structure and complex interior stripped away are essentially vesicles - membranes composed of lipid bilayers which form closed sacs. Vesicles are thought to be relevant as models of primitive protocells, and they could have provided the ideal environment for pre-biotic reactions to occur. In this paper, we investigate the stochastic dynamics of a set of autocatalytic reactions, within a spatially bounded domain, so as to mimic a primordial cell. The discreteness of the constituents of the autocatalytic reactions gives rise to large sustained oscillations, even when the number of constituents is quite large. These oscillations are spatio-temporal in nature, unlike those found in previous studies, which consisted only of temporal oscillations. We speculate that these oscillations may have a role in seeding membrane instabilities which lead to vesicle division. In this way synchronization could be achieved between protocell growth and the reproduction rate of the constituents (the protogenetic material) in simple protocells.Comment: Submitted to Phys. Rev.

The su(2)_{-1/2} WZW model and the beta-gamma system

The bosonic beta-gamma ghost system has long been used in formal constructions of conformal field theory. It has become important in its own right in the last few years, as a building block of field theory approaches to disordered systems, and as a simple representative -- due in part to its underlying su(2)_{-1/2} structure -- of non-unitary conformal field theories. We provide in this paper the first complete, physical, analysis of this beta-gamma system, and uncover a number of striking features. We show in particular that the spectrum involves an infinite number of fields with arbitrarily large negative dimensions. These fields have their origin in a twisted sector of the theory, and have a direct relationship with spectrally flowed representations in the underlying su(2)_{-1/2} theory. We discuss the spectral flow in the context of the operator algebra and fusion rules, and provide a re-interpretation of the modular invariant consistent with the spectrum.Comment: 33 pages, 1 figure, LaTeX, v2: minor revision, references adde

From Percolation to Logarithmic Conformal Field Theory

The smallest deformation of the minimal model M(2,3) that can accommodate Cardy's derivation of the percolation crossing probability is presented. It is shown that this leads to a consistent logarithmic conformal field theory at c=0. A simple recipe for computing the associated fusion rules is given. The differences between this theory and the other recently proposed c=0 logarithmic conformal field theories are underlined. The discussion also emphasises the existence of invariant logarithmic couplings that generalise Gurarie's anomaly number.Comment: 12 pages, 2 figures, minor changes mad

Indecomposability parameters in chiral Logarithmic Conformal Field Theory

Work of the last few years has shown that the key algebraic features of Logarithmic Conformal Field Theories (LCFTs) are already present in some finite lattice systems (such as the XXZ spin-1/2 chain) before the continuum limit is taken. This has provided a very convenient way to analyze the structure of indecomposable Virasoro modules and to obtain fusion rules for a variety of models such as (boundary) percolation etc. LCFTs allow for additional quantum numbers describing the fine structure of the indecomposable modules, and generalizing the `b-number' introduced initially by Gurarie for the c=0 case. The determination of these indecomposability parameters has given rise to a lot of algebraic work, but their physical meaning has remained somewhat elusive. In a recent paper, a way to measure b for boundary percolation and polymers was proposed. We generalize this work here by devising a general strategy to compute matrix elements of Virasoro generators from the numerical analysis of lattice models and their continuum limit. The method is applied to XXZ spin-1/2 and spin-1 chains with open (free) boundary conditions. They are related to gl(n+m|m) and osp(n+2m|2m)-invariant superspin chains and to nonlinear sigma models with supercoset target spaces. These models can also be formulated in terms of dense and dilute loop gas. We check the method in many cases where the results were already known analytically. Furthermore, we also confront our findings with a construction generalizing Gurarie's, where logarithms emerge naturally in operator product expansions to compensate for apparently divergent terms. This argument actually allows us to compute indecomposability parameters in any logarithmic theory. A central result of our study is the construction of a Kac table for the indecomposability parameters of the logarithmic minimal models LM(1,p) and LM(p,p+1).Comment: 32 pages, 2 figures, Published Versio

Bayesian hierarchical clustering for studying cancer gene expression data with unknown statistics

Clustering analysis is an important tool in studying gene expression data. The Bayesian hierarchical clustering (BHC) algorithm can automatically infer the number of clusters and uses Bayesian model selection to improve clustering quality. In this paper, we present an extension of the BHC algorithm. Our Gaussian BHC (GBHC) algorithm represents data as a mixture of Gaussian distributions. It uses normal-gamma distribution as a conjugate prior on the mean and precision of each of the Gaussian components. We tested GBHC over 11 cancer and 3 synthetic datasets. The results on cancer datasets show that in sample clustering, GBHC on average produces a clustering partition that is more concordant with the ground truth than those obtained from other commonly used algorithms. Furthermore, GBHC frequently infers the number of clusters that is often close to the ground truth. In gene clustering, GBHC also produces a clustering partition that is more biologically plausible than several other state-of-the-art methods. This suggests GBHC as an alternative tool for studying gene expression data. The implementation of GBHC is available at https://sites. google.com/site/gaussianbhc

SLE local martingales in logarithmic representations

A space of local martingales of SLE type growth processes forms a representation of Virasoro algebra, but apart from a few simplest cases not much is known about this representation. The purpose of this article is to exhibit examples of representations where L_0 is not diagonalizable - a phenomenon characteristic of logarithmic conformal field theory. Furthermore, we observe that the local martingales bear a close relation with the fusion product of the boundary changing fields. Our examples reproduce first of all many familiar logarithmic representations at certain rational values of the central charge. In particular we discuss the case of SLE(kappa=6) describing the exploration path in critical percolation, and its relation with the question of operator content of the appropriate conformal field theory of zero central charge. In this case one encounters logarithms in a probabilistically transparent way, through conditioning on a crossing event. But we also observe that some quite natural SLE variants exhibit logarithmic behavior at all values of kappa, thus at all central charges and not only at specific rational values.Comment: 40 pages, 7 figures. v3: completely rewritten, new title, new result

Some Aspects of c=-2 Theory

We investigate some aspects of the c=-2 logarithmic conformal field theory. These include the various representations related to this theory, the structures which come out of the Zhu algebra and the W algebra related to this theory. We try to find the fermionic representations of all of the fields in the extended Kac table especially for the untwisted sector case. In addition, we calculate the various OPEs of the fields, especially the energy-momentum tensor. Moreover, we investigate the important role of the zero modes in this model. We close the paper by considering the perturbations of this theory and their relationship to integrable models and generalization of Zamolodchikov's $c-$theorem.Comment: 25 page