4,849 research outputs found
The limitations of Slater's element-dependent exchange functional from analytic density functional theory
Our recent formulation of the analytic and variational Slater-Roothaan (SR)
method, which uses Gaussian basis sets to variationally express the molecular
orbitals, electron density and the one body effective potential of density
functional theory, is reviewed. Variational fitting can be extended to the
resolution of identity method,where variationality then refers to the error in
each two electron integral and not to the total energy. It is proposed that the
appropriate fitting functions be charge neutral and that all ab initio energies
be evaluated using two-center fits of the two-electron integrals. The SR method
has its root in the Slater's Xalpha method and permits an arbitrary scaling of
the Slater-Gaspar-Kohn-Sham exchange-correlation potential around each atom in
the system. Of several ways of choosing the scaling factors (Slater's exchange
parameters), two most obvious are the Hartree-Fock (HF), alpha_HF, values and
the exact atomic, alpha_EA, values. The performance of this simple analytic
model with both sets for atomization energies of G2 set of 148 molecules is
better than the local density approximation or the HF theory, although the
errors in atomization energy are larger than the target chemical accuracy.
To improve peformance for atomization energies, the SR method is
reparametrized to give atomization energies of 148 molecules to be comparbale
to those obtained by one of the most widely used generalized gradient
approximations. The mean absolute error in ionization potentials of 49 atoms
and molecules is about 0.5 eV and that in bond distances of 27 molecules is
about 0.02 Angstrom. The overall good performance of the computationally
efficient SR method using any reasonable set of alpha values makes it a
promising method for study of large systems.Comment: 33 pages, Uses RevTex, to appear in The Journal of Chemical Physic
Accurate molecular energies by extrapolation of atomic energies using an analytic quantum mechanical model
Using a new analytic quantum mechanical method based on Slater's Xalpha
method, we show that a fairly accurate estimate of the total energy of a
molecule can be obtained from the exact energies of its constituent atoms. The
mean absolute error in the total energies thus determined for the G2 set of 56
molecules is about 16 kcal/mol, comparable to or better than some popular pure
and hybrid density functional models.Comment: 5 pages, REVTE
Energetic disorder at the metal/organic semiconductor interface
The physics of organic semiconductors is dominated by the effects of
energetic disorder. We show that image forces reduce the electrostatic
component of the total energetic disorder near an interface with a metal
electrode. Typically, the variance of energetic disorder is dramatically
reduced at the first few layers of organic semiconductor molecules adjacent to
the metal electrode. Implications for charge injection into organic
semiconductors are discussed.Comment: 9 pages, 2 figure
Theoretical infra-red, Raman, and Optical spectra of the B36N36 cage
The B36N36 fullerene-like cage structure was proposed as candidate structure
for the single-shell boron-nitride cages observed in electron-beam irradiation
experiment. We have performed all electron density functional calculations,
with large polarized Gaussian basis sets, on the B36N36 cage. We show that the
cage is energetically and vibrationally stable. The infra-red, Raman and
optical spectra are calculated. The predicted spectra, in combination with
experimentally measured spectra, will be useful in conclusive assignment of the
proposed B36N36 cage. The vertical and adiabatic ionization potentials as well
as static dipole polarizability are also reported.Comment: RevTex, 4 pages, 4 figures (TO appear in Physical Review A (Breif
Report)
Distribution of averages in a correlated Gaussian medium as a tool for the estimation of the cluster distribution on size
Calculation of the distribution of the average value of a Gaussian random
field in a finite domain is carried out for different cases. The results of the
calculation demonstrate a strong dependence of the width of the distribution on
the spatial correlations of the field. Comparison with the simulation results
for the distribution of the size of the cluster indicates that the distribution
of an average field could serve as a useful tool for the estimation of the
asymptotic behavior of the distribution of the size of the clusters for "deep"
clusters where value of the field on each site is much greater than the rms
disorder.Comment: 15 pages, 6 figures, RevTe
Electronic and magnetic properties of some rare-earth dihydrides and dideuterides
Mössbauer spectroscopy has been used to study the electronic and magnetic properties of a number of rare-earth dihydrides and dideuterides. In stoichiometric ErH2 and DyH2, magnetic transitions and crystal field ground states have been established. In non-stoichiometric compounds DyH2+x and (Er)HoH2+x changes of the rare-earth point symmetry due to distributions in hydrogen site occupations are seen. This results in increases in the magnetic transition temperatures and distributions in the magnetic moments
Single molecule analysis of DNA wrapping and looping by a circular 14mer wheel of the bacteriophage 186 CI repressor
The lytic–lysogenic decision in bacteriophage 186 is governed by the 186 CI repressor protein in a unique way. The 186 CI is proposed to form a wheel-like oligomer that can mediate either wrapped or looped nucleoprotein complexes to provide the cooperative and competitive interactions needed for regulation. Although consistent with structural, biochemical and gene expression data, many aspects of this model are based on inference. Here, we use atomic force microscopy (AFM) to reveal the various predicted wrapped and looped species, and new ones, for CI regulation of lytic and lysogenic transcription. Automated AFM analysis showed CI particles of the predicted dimensions on the DNA, with CI multimerization favoured by DNA binding. Measurement of the length of the wrapped DNA segments indicated that CI may move on the DNA, wrapping or releasing DNA on either side of the wheel. Tethered particle motion experiments were consistent with wrapping and looping of DNA by CI in solution, where in contrast to λ repressor, the looped species were exceptionally stable. The CI regulatory system provides an intriguing comparison with that of nucleosomes, which share the ability to wrap and release similar sized segments of DNA.Haowei Wang, Ian B. Dodd, David D. Dunlap, Keith E. Shearwin, and Laura Finz
Resonance Effects in the Nonadiabatic Nonlinear Quantum Dimer
The quantum nonlinear dimer consisting of an electron shuttling between the
two sites and in weak interaction with vibrations, is studied numerically under
the application of a DC electric field. A field-induced resonance phenomenon
between the vibrations and the electronic oscillations is found to influence
the electronic transport greatly. For initially delocalization of the electron,
the resonance has the effect of a dramatic increase in the transport. Nonlinear
frequency mixing is identified as the main mechanism that influences transport.
A characterization of the frequency spectrum is also presented.Comment: 7 pages, 6 figure
Evidence from K2 for rapid rotation in the descendant of an intermediate-mass star
Using patterns in the oscillation frequencies of a white dwarf observed by
K2, we have measured the fastest rotation rate, 1.13(02) hr, of any isolated
pulsating white dwarf known to date. Balmer-line fits to follow-up spectroscopy
from the SOAR telescope show that the star (SDSSJ0837+1856, EPIC 211914185) is
a 13,590(340) K, 0.87(03) solar-mass white dwarf. This is the highest mass
measured for any pulsating white dwarf with known rotation, suggesting a
possible link between high mass and fast rotation. If it is the product of
single-star evolution, its progenitor was a roughly 4.0 solar-mass
main-sequence B star; we know very little about the angular momentum evolution
of such intermediate-mass stars. We explore the possibility that this rapidly
rotating white dwarf is the byproduct of a binary merger, which we conclude is
unlikely given the pulsation periods observed.Comment: 5 pages, 4 figure, 1 table; accepted for publication in The
Astrophysical Journal Letter
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