All plankton sampling systems underestimate abundance: Response to “Continuous plankton recorder underestimates zooplankton abundance” by J.W. Dippner and M. Krause

International audienceIt is axiomatic in plankton research that no plankton sampler, or combination of plankton samplers, can provide a true estimate of abundance for all components of the plankton at anytime. Plankton vary in size from the microbic to large ctenophores and jellyfish, from robust to those extremely fragile and almost impossible to catch without damage. Plankton have extremely diverse behavioural patterns, daily and seasonal vertical migration, and different feeding, reproductive, survival and escape strategies. Even within the crustacean mesozooplankton abundances vary in four dimensions. Consequently, it has been necessary to develop numerous different types of sampling systems, and different mesh sizes have been used, in order to capture or observe the various components of plankton. Wiebe and Benfield (2003) listed more than 200 systems and that is not exhaustive. All systems underestimate parts of or all the plankton leading researchers to choose the system most suited to their study..

Apparent mass of small children: Experimental measurements

A test facility and protocol were developed for measuring the seated, vertical, whole-body vibration response of small children of less than 18 kg in mass over the frequency range from 1 to 45 Hz. The facility and protocol adhered to the human vibration testing guidelines of BS7085 and to current codes of ethics for research involving children. Additional procedures were also developed which are not currently defined in the guidelines, including the integral involvement of the parents and steps taken to maximize child happiness. Eight children were tested at amplitudes of 0.8 and 1.2 m/s2 using band-limited, Gaussian, white noise acceleration signals defined over the frequency interval from 1 to 50 Hz. Driving point apparent mass modulus and phase curves were determined for all eight children at both test amplitudes. All results presented a single, principal, anti-resonance, and were similar to data reported for primates and for adult humans seated in an automotive posture which provided backrest support. The mean frequency of the apparent mass peak was 6.25 Hz for the small children, as compared to values between 6.5 - 8.5 Hz for small primates and values between 6.5 - 8.6 Hz for adults seated with backrest support. The peak value of the mean, normalized, apparent mass was 1.54 for the children, which compares to values from 1.19 to 1.45 reported in the literature for small primates and 1.28 for adults seated with backrest support. ISO standard 5982, which specifies a mean, normalized, apparent mass modulus peak of 1.50 at a frequency of 4.0 Hz for adults seated without backrest support, provides significant differences

Experimental observation of the breaking and recombination of single Cooper pairs

We observe the real-time breaking of single Cooper pairs by monitoring the radio-frequency impedance of a superconducting double quantum dot. The Cooper pair breaking rate in the microscale islands of our device decreases as temperature is reduced, saturating at 2 kHz for temperatures beneath 100 mK. In addition, we measure in real-time the quasiparticle recombination into Cooper pairs. Analysis of the recombination rates shows that, in contrast to bulk lms, a multi-stage recombination pathway is followed.A.J.F. would like to acknowledge the Hitachi Research fellowship, support from Hitachi Cambridge Laboratory and support from the EPSRC grant EP/H016872/1. B.W.L. is supported by a Royal Society University Research Fellowship. F.A.P. would like to thank the Leverhulme Trust for fi nancial support.This is the author accepted manuscript. The final version is available from APS via http://dx.doi.org/10.1103/PhysRevB.90.14050

Breath psychotherapy

Breath psychotherapy is an approach that makes direct use of the breath in healing. There are many forms of breathbased healing: basic breathing and relaxation methods, with or without the practice of psychological skills such as imagery, centring and concentration; expressive physical and emotional techniques; advanced meditation, prayer and other spiritual exercises. Such an approach has been extolled for millennia in the form of various spiritual, wisdom and healing traditions, including ancestor reverence, Judaism, Hinduism, Buddhism, Taoism, Christianity, and Islam which have holistically equated breath, consciousness, energy and spirit, as well as viewing breath as the vital link between body and mind. This approach distils into a perennial psychology, which recognizes a pre-reflective unity underlying and interlinking the various traditions and forms of breath-based healing and therapy. Accordingly, breath psychotherapy is based on an understanding and healing of the total psyche in the original, holistic meaning of this term. The present article is an appreciative inquiry into more recent forms of breath psychotherapy as promoted and used by modern authors and practitioners. Key Words: Breath-based, psychotherapy, breath therapy, consciousness, spirituality, healing

Communicating hope with one breath

The central thesis of this article was that the phenomenon of hope involves states and stages of consciousness development, which can be enhanced through breath control, meditation, prayer and related practices that have formed the essence of various spiritual healing traditions for millennia. In particular, it was argued that breath control can provide a vital foundation for consciousness transformation and the development of hope. Whilst breath control alone may lead to a state of pure, transcendent and/or cosmic consciousness, the practical theological implications are that its effect of enhancing states and stages of consciousness may be anchored and amplified. This process can take place through further contemplative and intercessory meditation, prayer and related behaviour and will differ between people, groups, contexts, religious and/or spiritual traditions. A particular method of breath control called One Breath, which is associated with pure consciousness and the experience of hope was described. Such an experience typically leads to further spiritual practice, healing and transformation. It was concluded that such ongoing spiritual practice is crucial for improving consciousness development, healing and hope for individuals, societies, planet Earth and the cosmos

One-pot synthesis and negative ion mass spectrometric investigation of a densely functionalized cinnoline, 3-amino-5,7,8-trichloro-6-hydroxycinnoline-4-carbonitrile

Known densely substituted 3-amino-5,7,8-trichloro-6-hydroxycinnoline-4-carbonitrile was synthesized using a new synthetic protocol involving chloranil and malonitrile via quinone methide formation. This one-pot synthesis occurs under base mediated conditions in a polar medium. The method involves condensation of excess malononitrile with chloranil in ethanol at reflux to 2-(2,4,5-trichloro-3-hydroxy-6-oxocyclohexa-2,4-dien-1-ylidene) malononitrile. This is an atom efficient, simple and effective procedure for the preparation of a highly substituted cinnoline that can serve as a relay to antimalarial prototypes

Heat Shock Protein 70 family members interact with Crimean-Congo hemorrhagic fever virus and Hazara virus nucleocapsid proteins and perform a functional role in the nairovirus replication cycle

The Nairovirus genus of the Bunyaviridae family contains serious human and animal pathogens classified within multiple serogroups and species. Of these serogroups, the Crimean-Congo hemorrhagic fever virus (CCHFV) serogroup comprises sole members CCHFV and Hazara virus (HAZV). CCHFV is an emerging zoonotic virus that causes often-fatal hemorrhagic fever in infected humans for which preventative or therapeutic strategies are not available. In contrast HAZV is non-pathogenic to humans, and thus represents an excellent model to study aspects of CCHFV biology under more accessible biological containment. The three RNA segments that form the nairovirus genome are encapsidated by the viral nucleocapsid protein (N) to form ribonucleoprotein (RNP) complexes that are substrates for RNA synthesis and packaging into virus particles. We used quantitative proteomics to identify cellular interaction partners of CCHFV N, and identified robust interactions with cellular chaperones. These interactions were validated using immunological methods, and the specific interaction between native CCHFV N and cellular chaperones of the HSP70 family was confirmed during live CCHFV infection. Using infectious HAZV we showed for the first time that the nairovirus N-HSP70 association was maintained within both infected cells and virus particles, where N is assembled as RNPs. Reduction of active HSP70 levels in cells using small molecule inhibitors significantly reduced HAZV titres, and a model for chaperone function in the context of high genetic variability is proposed. These results suggest chaperones of the HSP70 family are required for nairovirus replication and thus represent a genetically stable cellular therapeutic target for preventing nairovirus-mediated disease

An evaluation of a stress management intervention for parents of children with Attention-Deficit/Hyperactivity Disorder

The purpose of this study was to evaluate the experiences of parents’ participation in a stress management programme for parents with children diagnosed with Attention-Deficit/Hyperactivity Disorder (ADHD). It was expected that the programme would lead to improved parent-child relationships and more positive child behaviour. The qualitative, phenomenological approach included thematic content analysis. The stress management group consisted of 8 parents, 5 mothers and three fathers, who met for 9 consecutive weeks. There were nine sessions focusing on stress, education, resources, problem solving skills, cognitive restructuring, communication skills, self care skills, behaviour management and wrap-up respectively. Process evaluation consisted of a session-by-session description of the programme. Summative evaluation consisted of an appreciative inquiry questionnaire. Additional experiential data was obtained from the ADHD children of participants via an interview with the researcher. The results of the study suggested that the programme was effective. Parents experienced the programme as bringing about empowerment, group cohesion, cognitive restructuring, behaviour modification, growth, development and change. Children viewed their parents as having become more relaxed, approachable, inclusive and loving. An independent psychologist evaluated the programme positively in terms of its quality, effectiveness, flexibility, adaptability and comprehensiveness. While widely acknowledged, the difficulties of parents of children with ADHD are seldom the focus of intervention. The inclusion of a stress management counselling component for parents of ADHD children is recommended as a valuable adjunctive strategy in the overall comprehensive management of ADHD. Keywords: Stress management, children with ADHD, Attention Deficit Hyperactivity Disorder, parents - ADH

CXC chemokines and antimicrobial peptides in rhinovirus-induced experimental asthma exacerbations

RATIONALE: Rhinoviruses (RVs) are the major triggers of asthma exacerbations. We have shown previously that lower respiratory tract symptoms, airflow obstruction, and neutrophilic airway inflammation were increased in experimental RV-induced asthma exacerbations. OBJECTIVES: We hypothesized that neutrophil-related CXC chemokines and antimicrobial peptides are increased and related to clinical, virologic, and pathologic outcomes in RV-induced exacerbations of asthma. METHODS: Protein levels of antimicrobial peptides (SLPI, HNP 1–3, elafin, and LL-37) and neutrophil chemokines (CXCL1/GRO-α, CXCL2/GRO-β, CXCL5/ENA-78, CXCL6/GCP-2, CXCL7/NAP-2, and CXCL8/IL-8) were determined in bronchoalveolar lavage (BAL) fluid of 10 asthmatics and 15 normal controls taken before, at day four during and 6 weeks post-experimental infection. RESULTS: BAL HNP 1–3 and Elafin were higher, CXCL7/NAP-2 was lower in asthmatics compared with controls at day 4 (P = 0.035, P = 0.048, and P = 0.025, respectively). BAL HNP 1–3 and CXCL8/IL-8 were increased during infection (P = 0.003 and P = 0.011, respectively). There was a trend to increased BAL neutrophils at day 4 compared with baseline (P = 0.076). BAL HNP 1–3 was positively correlated with BAL neutrophil numbers at day 4. There were no correlations between clinical parameters and HNP1–3 or IL-8 levels. CONCLUSIONS: We propose that RV infection in asthma leads to increased release of CXCL8/IL-8, attracting neutrophils into the airways where they release HNP 1–3, which further enhances airway neutrophilia. Strategies to inhibit CXCL8/IL-8 may be useful in treatment of virus-induced asthma exacerbations

MultiMetEval: comparative and multi-objective analysis of genome-scale metabolic models

Comparative metabolic modelling is emerging as a novel field, supported by the development of reliable and standardized approaches for constructing genome-scale metabolic models in high throughput. New software solutions are needed to allow efficient comparative analysis of multiple models in the context of multiple cellular objectives. Here, we present the user-friendly software framework Multi-Metabolic Evaluator (MultiMetEval), built upon SurreyFBA, which allows the user to compose collections of metabolic models that together can be subjected to flux balance analysis. Additionally, MultiMetEval implements functionalities for multi-objective analysis by calculating the Pareto front between two cellular objectives. Using a previously generated dataset of 38 actinobacterial genome-scale metabolic models, we show how these approaches can lead to exciting novel insights. Firstly, after incorporating several pathways for the biosynthesis of natural products into each of these models, comparative flux balance analysis predicted that species like Streptomyces that harbour the highest diversity of secondary metabolite biosynthetic gene clusters in their genomes do not necessarily have the metabolic network topology most suitable for compound overproduction. Secondly, multi-objective analysis of biomass production and natural product biosynthesis in these actinobacteria shows that the well-studied occurrence of discrete metabolic switches during the change of cellular objectives is inherent to their metabolic network architecture. Comparative and multi-objective modelling can lead to insights that could not be obtained by normal flux balance analyses. MultiMetEval provides a powerful platform that makes these analyses straightforward for biologists. Sources and binaries of MultiMetEval are freely available from https://github.com/PiotrZakrzewski/MetEv​al/downloads