The comparison of growth rate, survival and food conversion ratio in Penaeus semisulcatus and Fenneropenaeus indicus in Helleh site, Bushehr province

Growth rate, survival and food conversion ratio were compared for two species of shrimp Penaeus semisulcatus and Fenneropenaeus indicus in Bushehr Province in summer 2002. The research was done with two treatments each in three replications in 0.4 ha ponds. Twenty five post larvae of the shrimps in stage PL ^ (12) with a mean weight of 5mg were stocked per square meter of the ponds and cultured for 109 days. We found significant differences during the first 31 days in SGR between P. semisulcatus and F. indicus (P<0.05). The mean final harvest rate was 903.33kg and 1025.00kg in each pond for P. semisulcatus and F. indicus, respectively. No significant differences in physical and chemical parameters were observed between the two species

Comparative antibacterial effects of essential oils of Melissa officinalis and Deracocephalum moldavica L. against some pathogenic bacteria in food in vitro

زمینه و هدف: استفاده از نگهدارنده&zwnj;های شیمیایی و مضرات آنها، سبب شده که تولید کنندگان مواد غذایی اخیرا گرایش به استفاده از نگهدارنده&zwnj;های طبیعی در مواد غذایی پیدا کنند. اسانس&zwnj;های گیاهی که همان روغن&zwnj;های فرار (volatile oils) می باشند، روغن&zwnj;های مایع و معطر گیاهان اند. گیاهان معطر حاوی اسانس هایی با خواص ضد میکروبی هستند. در این مطالعه اثرات ضدباکتریایی اسانس&zwnj;های بادرنجبویه (Melissa officinalis) و بادرشبو (Dracocephalum moldavica) علیه 4 باکتری بیماریزای مواد غذایی در شرایط آزمایشگاهی بررسی شد. روش بررسی: در این مطالعه تجربی پس از تهیه باکتری های مورد بررسی، با روش انتشار بر روی دیسک قطر هاله ممانعت از رشد و با روش میکرودایلوشن حداقل غلظت ممانعت از رشد و حداقل غلظت کشندگی برای هر دو اسانس بادرنجبویه و بادرشبو تعیین شد و جهت مقایسه نتایج از نرم افزار SPSS با آزمون T test استفاده گردید و سطح اختلاف معنی دار کمتر از 0/05 انتخاب شد(P&lt; 0/05). یافته ها: نتایج این مطالعه بیانگر تاثیر ضد میکروبی قوی دو اسانس فوق روی این باکتری ها بود. باکتری استافیلوکوکوس اورئوس با حداقل غلظت ممانعت کنندگی mg/mL 1/2 (برای هر دو اسانس) حساس&zwnj;ترین باکتری در مقابل اسانس&zwnj;های بادرنجبویه و بادرشبو بود. در این میان اسانس بادرنجبویه اثرات ضد باکتریایی قوی&zwnj;تری علیه باکتری&zwnj;های مورد آزمایش در مقایسه با اسانس بادرشبو داشت. نتیجه گیری: نتایج حاصل بیانگر توان مهارکنندگی و ضد باکتریایی اسانس های بادرنجبویه و بادرشبو علیه این میکروارگانیسم های بیماریزا می باشد که می تواند بعنوان یک ماده ضد میکروبی گیاهی، جایگزینی مناسب برای ترکیبات شیمیایی ضد باکتری باشد و در صنایع غذایی و داروسازی مورد استفاده قرار گیرد

Greedy Selfish Network Creation

We introduce and analyze greedy equilibria (GE) for the well-known model of selfish network creation by Fabrikant et al.[PODC'03]. GE are interesting for two reasons: (1) they model outcomes found by agents which prefer smooth adaptations over radical strategy-changes, (2) GE are outcomes found by agents which do not have enough computational resources to play optimally. In the model of Fabrikant et al. agents correspond to Internet Service Providers which buy network links to improve their quality of network usage. It is known that computing a best response in this model is NP-hard. Hence, poly-time agents are likely not to play optimally. But how good are networks created by such agents? We answer this question for very simple agents. Quite surprisingly, naive greedy play suffices to create remarkably stable networks. Specifically, we show that in the SUM version, where agents attempt to minimize their average distance to all other agents, GE capture Nash equilibria (NE) on trees and that any GE is in 3-approximate NE on general networks. For the latter we also provide a lower bound of 3/2 on the approximation ratio. For the MAX version, where agents attempt to minimize their maximum distance, we show that any GE-star is in 2-approximate NE and any GE-tree having larger diameter is in 6/5-approximate NE. Both bounds are tight. We contrast these positive results by providing a linear lower bound on the approximation ratio for the MAX version on general networks in GE. This result implies a locality gap of $\Omega(n)$ for the metric min-max facility location problem, where n is the number of clients.Comment: 28 pages, 8 figures. An extended abstract of this work was accepted at WINE'1

EpiFactors : a comprehensive database of human epigenetic factors and complexes

Altres ajuts: Russian Fund For Basic Research(RFFI)grant 14-04-0018 i grant 15-34-20423, Ake Olsson's foundation, Swedish Cancer foundation, Swedish Childhood cancer foundation, Dynasty Foundation Fellowship, RIKEN Omics Science Center, RIKEN Preventive Medicine and Diagnosis Innovation Program i RIKEN Center for Life Science Technologies.Abstract: Epigenetics refers to stable and long-term alterations of cellular traits that are not caused by changes in the DNA sequence per se. Rather, covalent modifications of DNA and histones affect gene expression and genome stability via proteins that recognize and act upon such modifications. Many enzymes that catalyse epigenetic modifications or are critical for enzymatic complexes have been discovered, and this is encouraging investigators to study the role of these proteins in diverse normal and pathological processes. Rapidly growing knowledge in the area has resulted in the need for a resource that compiles, organizes and presents curated information to the researchers in an easily accessible and user-friendly form. Here we present EpiFactors, a manually curated database providing information about epigenetic regulators, their complexes, targets and products. EpiFactors contains information on 815 proteins, including 95 histones and protamines. For 789 of these genes, we include expressions values across several samples, in particular a collection of 458 human primary cell samples (for approximately 200 cell types, in many cases from three individual donors), covering most mammalian cell steady states, 255 different cancer cell lines (representing approximately 150 cancer subtypes) and 134 human postmortem tissues. Expression values were obtained by the FANTOM5 consortium using Cap Analysis of Gene Expression technique. EpiFactors also contains information on 69 protein complexes that are involved in epigenetic regulation. The resource is practical for a wide range of users, including biologists, pharmacologists and clinicians

Application of Efficient Express Sequence Tags Information for Classification and Functional Study of Simple Sequence Repeats in Cattle Testis Tissue

Genomic markers play an important role in tracing the flow of genetic causality of observable signals in animals and plants. In farm animals, the participation of male animals in the gene pool of subsequent generations are much higher than female animals and testes are the most important organs of the male reproductive system. This study was conducted to investigate simple sequence repeats (SSR) within the expressed sequence tags (ESTs) in order to classify the Bos taurus testis tissue’s genes for their relationship and specificity with related reproductive domains. A total of 48,549 publicly available EST sequences from cattle testis tissue downloaded from GenBank database, out of which, 10,237 sequences that their library made from testis tissue were extracted and specialized as the studied sequences using several searching tools and software. Across these selective sequences, 2,039 contigs, 5,097 singletons, and 153 SSRs were detected. EST-SSRs were subsequently evaluated using GenBank and categorized based on their functions in biological systems of dairy cattle. Investigation of these motifs showed that the identified EST-SSRs can be classified into 48 types that GT in dinucleotides and GCC in trinucleotides had the highest frequency. Annotation and gene ontology analysis revealed a relationship among 54 domains with the observed SSRs. Localization and characterization of such markers can help tracing the production of amino acids coded by identified repeats as shown in this study