5,952 research outputs found
The Relationship between the UniProt Knowledgebase (UniProtKB) and the IntAct Molecular Interaction Databases
IntAct provides a freely available, open source database system and analysis tools for protein interaction data. All interactions are derived from literature curation or direct user submission and all experimental information relating to binary protein-protein
interactions is entered into the IntAct database by curators, via a web-based editor. Interaction information is added to the SUBUNIT comment and the RP line of the relevant publication within the UniProtKB entry. There may be a single INTERACTION comment present within a UniProtKB entry, which conveys information relevant to binary protein-protein interactions. This is automatically derived from the IntAct database and is updated on a triweekly basis. Interactions can be derived by any appropriate experimental method but must be confirmed by a second interaction if resulting from a single yeast2hybrid experiment. For large-scale experiments, interactions are considered if a high confidence score is assigned by the authors. The INTERACTION line contains a direct link to IntAct that provides detailed information for the experimental support. These lines are not changed manually and any discrepancy is reported to IntAct for updates. There is also a database crossreference line within the UniProtKB entry i.e.: DR IntAct _UniProtKB AC, which directs the user to additional interaction data for that molecule. 
UniProt is supported by grants from the National Institutes of Health, European Commission, Swiss Federal Government and PATRIC BRC.
IntAct is funded by the European Commission under FELICS, contract number 021902 (RII3) within the Research Infrastructure Action of the FP6 "Structuring the European Research Area" Programme
Poor fish farmers' accessibility to credits: A review
Fisheries sector contributes about 5.3% to GDP and about 6% of the export earnings of Bangladesh. There are about 4.1 million ha of inland water bodies in Bangladesh. However, over last two decades the catch from inland capture fishery has decreased due to filling of wet lands and other anthropogenic reasons. Accordingly, the production of inland fish has decreased not only for the decrease of water bodies but also due to irrational catch of fish fries, brood fishes and use of current nets for fishing. Significant responses from the fisheries entrepreneurs have not been received for the small loan scheme of the Bangladesh Bank. The bank could not disburse more than Tk. 500 million under the scheme. The total revolving credit under the scheme was Tk. 1,000 million with the assistance from the World Bank. The business houses having fixed assets of value not more than Tk. 10 million will be eligible to borrow from this fund. About Tk. 0.2-5.0 million can be borrowed as term loan and working capital from Bangladesh Bank through commercial banks. The loan was given to the commercial banks at 5% interest (bank rate) and the commercial banks shall also bridge finance to the entrepreneurs at a lower rate of interest. Working capital time limit is for a maximum of 1 year with half yearly rest, mid-term loan maximum of 3 years in 5 installments and with 6 months grace period and long-term loan maximum of 5 years in 9 installments with 6 months grace period
Dynamic Behavior of Bed Material around Bridge Pier under Abrupt Change of Water Pressure
Major failure of structures usually occurs during flood flows due to scourin, sinking and sliding. These types of failure are considered to be in close relation to the dynamic behavior of bed material around the structures. Failure of bridges due to the phenomenon of scouring around piers is a common, natural problem of river hydraulics. Experiments were carried out to investigate the characteristics of pore water pressure and effective stresses in the bed material around a circular bridge pier under abrupt change of water pressure. A laboratory model was used to clarify the effect of the variation of water pressure to determine the mechanism of the collapse of circular bridge pier during flood or storm waves. The experimental results showed that the bed material under suddeen change in drop of water pressure near the pier was weakenend by an increase in excess pore pressure, followed by a considerable quick removal of bed material
Comparing the Overhead of Topological and Concatenated Quantum Error Correction
This work compares the overhead of quantum error correction with concatenated
and topological quantum error-correcting codes. To perform a numerical
analysis, we use the Quantum Resource Estimator Toolbox (QuRE) that we recently
developed. We use QuRE to estimate the number of qubits, quantum gates, and
amount of time needed to factor a 1024-bit number on several candidate quantum
technologies that differ in their clock speed and reliability. We make several
interesting observations. First, topological quantum error correction requires
fewer resources when physical gate error rates are high, white concatenated
codes have smaller overhead for physical gate error rates below approximately
10E-7. Consequently, we show that different error-correcting codes should be
chosen for two of the studied physical quantum technologies - ion traps and
superconducting qubits. Second, we observe that the composition of the
elementary gate types occurring in a typical logical circuit, a fault-tolerant
circuit protected by the surface code, and a fault-tolerant circuit protected
by a concatenated code all differ. This also suggests that choosing the most
appropriate error correction technique depends on the ability of the future
technology to perform specific gates efficiently
Effects of different types of feeds on growth and production of tiger shrimp, Penaeus monodon at Bagerhat region, Bangladesh
An experiment was carried out in farmers' gher (shrimp farm) at Bagerhat sadar upazilla, Bagerhat to ascertain the effects of three different types of feeds on the production and economics of brackishwater shrimp, Penaeus monodon for a period of 120 days. There were three treatments such as T1 (BFRI dough feed containing of 30% fish meal, 10% protein conc., 10% soya meal, 15% mustard oil cake, 18% rice bran, 5% maize, 10% wheat flour, 1% oyster shell powder and 1% vitamin premix), T2 (Commercial diet Saudi-Bangla grower) and T3 (Saudi-Bangla special feed). Each treatment had two replicates and the stocking of shrimp in each gher was 3 nos/m². Water quality parameters did not differ significantly among the treatments except water depth. Average production and net return of shrimp in different treatments varied from 404.0 to 509.0 kg/ha and Tk. 56,493.99-Tk. 84,209.60, respectively. T2 showed significantly (p<0.05) the highest production and economic return. The result of the study implied that T2 is more suitable and economically viable than that of other treatments for shrimp farming
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