95 research outputs found
NM-MF: Non-Myopic Multifidelity Framework for Constrained Multi-Regime Aerodynamic Optimization
The exploration and trade-off analysis of different aerodynamic design configurations requires solving optimization problems. The major bottleneck to assess the optimal design is the large number of time-consuming evaluations of high-fidelity computational fluid dynamics (CFD) models, necessary to capture the non-linear phenomena and discontinuities that occur at higher Mach number regimes. To address this limitation, we introduce an original non-myopic multifidelity Bayesian framework aimed at including expensive high-fidelity CFD simulations for the optimization of the aerodynamic design. Our scheme proposes a novel two-step lookahead policy to maximize the improvement of the solution quality considering the rewards of future steps, and combines it with utility functions informed by the fluid dynamic regime and the information extracted from data, to wisely select the aerodynamic model to interrogate. We validate the proposed framework for the case of a constrained drag coefficient optimization problem of a NACA 0012 airfoil, and compare the results to other popular multifidelity and single-fidelity optimization frameworks. The results suggest that our strategy outperforms the other approaches, allowing to significantly reduce the drag coefficient through a principled selection of limited evaluations of the high-fidelity CFD model
Non-Myopic Multifidelity Bayesian Optimization
Bayesian optimization is a popular framework for the optimization of black
box functions. Multifidelity methods allows to accelerate Bayesian optimization
by exploiting low-fidelity representations of expensive objective functions.
Popular multifidelity Bayesian strategies rely on sampling policies that
account for the immediate reward obtained evaluating the objective function at
a specific input, precluding greater informative gains that might be obtained
looking ahead more steps. This paper proposes a non-myopic multifidelity
Bayesian framework to grasp the long-term reward from future steps of the
optimization. Our computational strategy comes with a two-step lookahead
multifidelity acquisition function that maximizes the cumulative reward
obtained measuring the improvement in the solution over two steps ahead. We
demonstrate that the proposed algorithm outperforms a standard multifidelity
Bayesian framework on popular benchmark optimization problems
DOMAIN-AWARE MULTIFIDELITY LEARNING FOR DESIGN OPTIMIZATION
Accurate physics-based models are essential to the design and optimization of engineering systems, to compute key performance indicators associated with alternative design solutions. The implementation of high-fidelity models in simulation-based design optimization poses significant challenges due to the relevant computational cost frequently associated with their execution. However, real world engineering systems can rely on the availability of multiple models or approximations of their physics, representations characterized by different computational complexity and accuracy. Those alternative models can be cheaper to evaluate and can thus be exploited to enhance the efficiency of the optimization task. Multifidelity methods allow to combine multiple sources of information at different levels of fidelity, potentially exploiting the affordability of low fidelity evaluations to massively explore the design space, then enriching the accuracy through a reduced number of high-fidelity queries [1]. Many multifidelity optimization methods combine data from multiple models into a probabilistic surrogate, frequently delaying the identification of promising design alternatives that could rather be more efficiently captured if domain specific expertise were also used to inform the search [2]. To address this challenge, we present original domain-aware multifidelity frameworks to accelerate design optimization and improve the quality of the solution. In particular, our strategy is based on an active learning scheme that combines data-driven and physics-informed utility functions, to include the expert knowledge about the specific physical phenomena during the search for the optimal design. This allows to tailor the selection of the physical model to evaluate and increase the efficiency of the learning process, using at best a limited amount of high-fidelity data to sensitively improve the design solution. We discuss several applications of the proposed framework for aerospace design optimization problems, considering atmospheric flight at low and high altitudes for both aeronautics and space applications.
[1] Peherstorfer, B., Willcox, K., Gunzburger, M. Survey of multifidelity methods in uncertainty propagation, inference, and optimization. Siam Review (2018) 60(3): 550–591.
[2] Di Fiore, F., Maggiore, P. Mainini L. Multifidelity domain-aware learning for the design of re-entry vehicles. Structural and Multidisciplinary Optimization (2021) 64: 3017–303
Domain-Aware Active Learning for Multifidelity Optimization
Bayesian optimization is a popular strategy for the optimization of black-box objective functions [1]. In many engineering applications, the objective can be evaluated with multiple representations at different levels of fidelity, to enhance a trade-off between cost and accuracy. Accordingly, multifidelity methods have been proposed in a Bayesian framework to efficiently combine information sources, using low-fidelity models to enable the exploration of design alternatives, and improve the accuracy of the solution through limited high-fidelity evaluations [2]. Most multifidelity methods based on active learning search the optimal design considering only the information extracted from the surrogate model. This can preclude the evaluation of promising design configurations that can be captured only including the knowledge of the particular physical phenomena involved [3]. To address this issue, this presentation discusses original domain-aware multifidelity Bayesian frameworks to accelerate design analysis and optimization performances. In particular, our strategy comes with an active learning scheme to adaptively sample the design space, combining statistical data from the surrogate model with physical information from the specific domain. Our formulation introduces physics-informed utility functions as additional contributions to the acquisition functions. This permits to enhance the active learning with a physicsbased insight and to realize a form of domain awareness which is beneficial to the efficiency and accuracy of the optimization task. The presentation will discuss several applications and implementations of the proposed approach for single discipline and multidisciplinary aerospace design optimization problems.
[1] Snoek, J., Larochelle, H.. Adams, R.P. Practical bayesian optimization of machine learning algorithms. Advances in neural information processing systems. (2012) 25.
[2] Peherstorfer, B., Willcox, K., Gunzburger, M. Survey of multifidelity methods in uncertainty propagation, inference, and optimization. Siam Review (2018) 60(3): 550–591.
[3] Di Fiore, F., Maggiore, P. Mainini L. Multifidelity domain-aware learning for the design of re-entry vehicles. Structural and Multidisciplinary Optimization (2021
Development of a new microparticle vaccine adjuvant with the ability to deliver peptides and siRNAs to Dendritic Cells in order to boost the immune response
Recently, new discoveries in the field of cancer immunology have been able to increase the strength of immune responses against tumors. For example, monoclonal antibodies such as Ipilimumab and Nivolumab are able to drastically reduce the suppressive capabilities of cancer cells and regulatory T cells leading to complete or partial responses in a substantial portion of patients with non-small-cell lung cancer, melanoma and renal-cell cancer. Other immuno-therapeutic approaches are aimed at stimulating an immune response against specific molecular targets expressed by tumor cells. This could be achieved by the administration of modified immune cells derived from the patient or by inducing an immune response against tumor cells with cancer vaccines. In the case of cancer vaccines, the therapy involves the delivery of an antigen (in the form of protein or peptide) that is expressed by cancer cells to antigen presenting cells (APCs). To further modulate the activity of target APCs, the delivery system could be designed to enhance the function of APCs as an adjuvant therapy in order to stimulate a stronger and prolonged immune response.
Recent data suggest that the function and survival of APCs can be modulated by targeting genes involved in immune suppression/regulation with small interfering RNAs (siRNAs). siRNAs are a class of double stranded RNA molecules designed to interfere with the expression of specific genes with complementary nucleotide sequences. siRNAs are incorporated into the RNA interference specificity complex (RISC) leading to the cleavage and degradation of the target mRNA.
Since siRNAs are prone to ribonucleases and lysosomal degradation, they require a delivery system designed to rapidly target an appropriate cell population and to avoid degradation. This research work addresses whether implementation of a molecular release mechanism associated with an APC targeting vector would be advantageous to avoid the degradation of siRNAs and peptide antigens. A bacteria derived microparticle called MIS416 designed to target APCs was used as a delivery system to test this hypothesis.
MIS416 is an intact minimal cell wall skeleton derived from Proprionibacterium acnes and comprises NOD-2 (nucleotide-binding oligomerization domain containing 2) and TLR-9 (toll-like receptor-9) ligands, both of which have well-described adjuvant activity. Given its inherent adjuvant properties, MIS416 microparticles could provide an ideal vehicle for co-delivery of cargo such as peptide antigens, as well as immunomodulatory siRNAs to APCs.
In this work, MIS416 microparticles were used as a vehicle for the delivery of the peptide antigen SIINFEKL and siRNAs to target Dendritic cells (DCs) in order to modulate the immune response against tumors. These conjugates were designed to facilitate the release of the attached molecular cargo by the inclusion of a glutathione sensitive cleavable bond (disulfide). The release strategy takes advantage of the different concentration of glutathione between the extracellular environment and the cytoplasm of target cells. This approach was hypothesized to facilitate the release of siRNAs and peptides from MIS416 after internalization of MIS416 conjugates in target cells to avoid lysosomal degradation. A conjugation strategy based on a streptavidin bridge was developed to link biotinylated peptide/siRNA to biotinylated MIS416. The conjugation strategy was validated by delivery of fluorophores and the model peptide antigen, SIINFEKL to DCs. MIS416/siRNA conjugates were also developed to investigate whether they could negatively regulate the expression of target proteins on DCs.
The results showed that conjugates containing a disulfide linker were able to more rapidily release SIINFEKL in the cytoplasm of DCs than conjugates not containing a disulfide. However, the inclusion of a cleavable bond in these conjugates did not improve the presentation of the antigen on MHC (major histocompatibility complex) molecules on DCs. Furthermore, DCs treated with MIS416/SIINFEKL conjugates were able to induce activation and expansion of specific CD8 T cells, in addition to a cytotoxic response against the peptide antigen SIINFEKL in treated mice. However, the cytotoxic response was greater in mice vaccinated with MIS416/SIINFEKL conjugates that did not possess a disulfide bond in the linker. Furthemore, following treatment of DCs with MIS416/siRNA conjugates target protein levels were significantly downregulated, leading to the conclusion that MIS416/siRNA conjugates should be investigated for in vivo use.
To conclude, the results suggest that a disulfide-based release strategy could be used for the delivery of siRNAs to DCs. However, the release mechanism does not improve the immune response generated by MIS416/SIINFEKL conjugates indicating that a more rapid release is not advantageous for peptide delivery. In a future extension of this research MIS416 microparticles could potentially be used in vivo for the co-delivery of peptide antigens and siRNAs, to modulate APC activity and to induce a specific immune response against molecular targets expressed by tumor cells
Multifidelity modeling for the design of re-entry capsules
The design and optimization of space systems presents many challenges associated with the variety of physical domains involved and their coupling. A practical example is the case of satellites and space vehicles designed to re-enter the atmosphere upon completion of their mission [1]. For these systems, aerodynamics and thermodynamics phenomena are strongly coupled and relate to structural dynamics and vibrations, chemical non equilibrium phenomena that characterize the atmosphere, specific re-entry trajectory, and geometrical shape of the body. Blunt bodies are common geometric configurations used in planetary re-entry (e.g. Apollo Command Module, Mars Viking probe, etc.). These geometries permit to obtain high aerodynamic resistance to decelerate the vehicle from orbital speeds along with contained aerodynamic lift for trajectory control. The large radius-of-curvature of the bodies’ nose allows to reduce the heat flux determined by the high temperature effects behind the shock wave. The design and optimization of these bodies would largely benefit from accurate analyses of the re-entry flow field through high-fidelity representations of the aerodynamic and aerothermodynamic phenomena. However, those high-fidelity representations are usually in the form of computer models for the numerical solutions of PDEs (e.g. Navier-Stokes equations, heat equations, etc.) which require significant computational effort and are commonly excluded from preliminary multidisciplinary design and trade-off analysis.
This work addresses the integration of high-fidelity computer-based simulations for the multidisciplinary design of space systems conceived for controlled re-entry in the atmosphere. In particular, we discuss the use of multifidelity methods to obtain efficient aerothermodynamic models of the re-entering vehicles. Multifidelity approaches allow to accelerate the exploration and evaluation of design alternatives through the use of different representations of a physical system/process, each characterized by a different level of fidelity and associated computational expense [2, 3]. By efficiently combining less-expensive information from low-fidelity models with a principled selection of few expensive simulations, multifidelity methods allow to incorporate high-fidelity costly information for multidisciplinary design analysis and optimization [4–7]. This presentation proposes a multifidelity Bayesian optimization framework leveraging surrogate models in the form of gaussian processes, which are progressively updated through acquisition functions based on expected improvement. We introduce a novel formulation of the multifideltiy expected improvement including both data-driven and physics-informed utility functions, specifically implemented for the case of the design optimization of an Orion-like atmospheric re-entry vehicle. The results show that the proposed formulation gives better optimization results (lower minimum) than single fidelity Bayesian optimization based on low-fidelity simulations only. The outcome suggests that the multifidelity expected improvement algorithm effectively enriches the information content with the high-fidelity data. Moreover, the computational cost associated with 100 iterations of our multifidelity strategy is sensitively lower than the computational burden of 6 iterations of a single fidelity framework invoking the high-fidelity model.
References
[1] Gallais, P., Atmospheric re-entry vehicle mechanics, Springer Science and Business Media, 2007.
[2] Peherstorfer, B., Willcox, K., and Gunzburger, M., “Survey of Multifidelity Methods in Uncertainty Propagation, Inference, and Optimization,” SIAM Review, Vol. 60, 2018, pp. 550–591.
[3] Fernandez-Godino, G., Park, C., Kim, N., and Haftka, R., “Issues in Deciding Whether to Use Multifidelity Surrogates,” AIAA Journal, 2019, p. 16.
[4] Mainini, L., and Maggiore, P., “A Multifidelity Approach to Aerodynamic Analysis in an Integrated Design Environment,” AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics and Materials Conference, AIAA, 2012.
[5] Goertz, S., Zimmermann, R., and Han, Z. H., “Variable-fidelity and reduced-order models for aero data for loads predictions,” Computational Flight Testing, 2013, pp. 99–112.
[6] Meliani, M., Bartoli, N., Lefebvre, T., Bouhlel, M.A., J., Martins, and Morlier, J., “Multi-fidelity efficient global optimization: Methodology and application to airfoil shape design,” AIAA Aviation 2019 Forum, AIAA, 2019.
[7] Beran, P., Bryson, D., Thelen, A., Diez, M., and Serani, A., “Comparison of Multi-Fidelity Approaches for Military Vehicle Design,” AIAA Aviation 2020 Forum, AIAA, 2020
Multifidelity Learning for the Design of Re-Entry Capsules
The design and optimization of re-entry capsules presents many challenges associated with the variety of physical domains involved and their couplings. Examples are capsules for the transfer of astronauts to the international space station and for future Lunar and Martian exploration missions. For these vehicles, aerodynamics and thermodynamics phenomena are strongly coupled and relate to structural dynamics and vibrations, chemical non equilibrium phenomena that characterize the atmosphere, specifi c re-entry trajectory, and geometrical shape of the body. The design and optimization of these capsules would largely benefi t from accurate analyses of the re-entry flow field through high- fidelity representations of the aerothermodynamic phenomena. However, those high- fidelity representations are usually in the form of computer models for the numerical solutions of PDEs (e.g. Navier-Stokes equations, heat equations, etc.) which require signifi cant computational effort and are commonly excluded from preliminary multidisciplinary design and trade-off analysis.
This presentation discusses the use of multi fidelity methods to integrate high- fidelity simulations in order to obtain efficient aerothermodynamic models of the re-entering vehicles. Multi fidelity approaches allow to accelerate the exploration and evaluation of design alternatives through the use of different representations of a physical system/process, each characterized by a different level of fidelity and associated computational expense. By efficiently combining less-expensive information from low- fidelity models with a principled selection of few expensive simulations, multi fidelity methods allow to incorporate high-fidelity costly information for design analysis and optimization. Speci fically, we propose a multifi delity active learning strategy to accelerate the multidisciplinary design optimization (MDO) of a re-entry vehicle. The active learning scheme is formulated to be both data driven and domain-aware, and is implemented for the design of an Orion-like re-entry capsule. The MDO problem comprises trajectory analysis, propulsion system model, aerothermodynamic models, and structural model of the thermal protection systems (TPS). The design objectives are the minimization of the propellant mass burned during the entry maneuver, the structural mass of the TPS and the temperature reached by the TPS structure. The results show that our multifidelity scheme allows to efficiently improve the design solution through a limited number of high- fidelity evaluations
Multifidelity domain-aware learning for the design of re-entry vehicles
The multidisciplinary design optimization (MDO) of re-entry vehicles presents many challenges associated with the plurality
of the domains that characterize the design problem and the multi-physics interactions. Aerodynamic and thermodynamic
phenomena are strongly coupled and relate to the heat loads that affect the vehicle along the re-entry trajectory, which drive
the design of the thermal protection system (TPS). The preliminary design and optimization of re-entry vehicles would benefit
from accurate high-fidelity aerothermodynamic analysis, which are usually expensive computational fluid dynamic simulations.
We propose an original formulation for multifidelity active learning that considers both the information extracted from
data and domain-specific knowledge. Our scheme is developed for the design of re-entry vehicles and is demonstrated for
the case of an Orion-like capsule entering the Earth atmosphere. The design process aims to minimize the mass of propellant
burned during the entry maneuver, the mass of the TPS, and the temperature experienced by the TPS along the re-entry.
The results demonstrate that our multifidelity strategy allows to achieve a sensitive improvement of the design solution with
respect to the baseline. In particular, the outcomes of our method are superior to the design obtained through a single-fidelity
framework, as a result of the principled selection of a limited number of high-fidelity evaluations
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