36 research outputs found

    Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy.

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    Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in four generations of a Chinese family with STGD4-like MD. We found a novel heterozygous missense mutation, c.734T>C (p.L245P) in the PROM1 gene. Structurally, this mutation most likely impairs PROM1 protein stability, flexibility, and amino acid interaction network after changing the amino acid residue Leucine into Proline in the basic helix-loop-helix leucine zipper domain. Molecular dynamic simulation and principal component analysis provide compelling evidence that this PROM1 mutation contributes to disease causativeness or susceptibility variants in patients with STGD4-like MD. Thus, this finding defines new approaches in genetic characterization, accurate diagnosis, and prevention of STGD4-like MD

    Genetic Identification and Molecular Modeling Characterization Reveal a Novel PROM1 Mutation in Stargardt4-like Macular Dystrophy

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    Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in four generations of a Chinese family with STGD4-like MD. We found a novel heterozygous missense mutation, c.734T\u3eC (p.L245P) in the PROM1 gene. Structurally, this mutation most likely impairs PROM1 protein stability, flexibility, and amino acid interaction network after changing the amino acid residue Leucine into Proline in the basic helix-loop-helix leucine zipper domain. Molecular dynamic simulation and principal component analysis provide compelling evidence that this PROM1 mutation contributes to disease causativeness or susceptibility variants in patients with STGD4-like MD. Thus, this finding defines new approaches in genetic characterization, accurate diagnosis, and prevention of STGD4-like MD

    Identification of a Novel Heterozygous Missense Mutation in the CACNA1F

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    Background. Retinitis pigmentosa (RP) is an inherited retinal degenerative disease, which is clinically and genetically heterogeneous, and the inheritance pattern is complex. In this study, we have intended to study the possible association of certain genes with X-linked RP (XLRP) in a Chinese family. Methods. A Chinese family with RP was recruited, and a total of seven individuals were enrolled in this genetic study. Genomic DNA was isolated from peripheral leukocytes, and used for the next generation sequencing (NGS). Results. The affected individual presented the clinical signs of XLRP. A heterozygous missense mutation (c.1555C>T, p.R519W) was identified by NGS in exon 13 of the CACNA1F gene on X chromosome, and was confirmed by Sanger sequencing. It showed perfect cosegregation with the disease in the family. The mutation at this position in the CACNA1F gene of RP was found novel by database searching. Conclusion. By using NGS, we have found a novel heterozygous missense mutation (c.1555C>T, p.R519W) in CACNA1F gene, which is probably associated with XLRP. The findings might provide new insights into the cause and diagnosis of RP, and have implications for genetic counseling and clinical management in this family

    Novel measurement for multidirectional fabric wrinkling using wavelet analysis

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    Novel testing equipment for fabric wrinkle resistance simulating actual wear

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    Wrinkling is one of the most important factors that determine the visual aesthetic of our clothes. To investigate wrinkling characteristics in actual wear and explore the relationship between the wrinkling caused by wearing and testing results of the wrinkle recovery angle (WRA) method, we made a device that can produce wrinkles very similar to those on clothes. Twenty-four fabrics were wrinkled by the device, and the images of wrinkled fabrics were analyzed. Wrinkle density (WD) was defined for wrinkling characterization. In addition, fractal dimension (FD) and gray level co-occurrence matrix (GLCM) variables were also used to describe wrinkling. These features were subsequently correlation analyzed with wrinkle recovery angles in 11 directions. The results show that both FD and WD can be used to characterize the wrinkling behavior and wrinkles generated by the device have obvious fractal characteristics. The larger the wrinkle recovery angle, the lower the fractal dimension. GLCM variables (energy, entropy, contrast, and correlation) had not shown obvious correlation with WRA. Furthermore, the wrinkling behavior in the 45° direction plays an important role in actual wear. It is advised that the WRA in the 45° direction be tested. </jats:p
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