Identifying cold-water coral ecosystem by using benthic foraminiferal indicators: from active reefs to the geological record

Cold-water coral ecosystems dominated by the species Lophelia pertusa and Madrepora oculata, as well as cold-water coral carbonate mounds (fossils and/or active) occur worldwide and are especially developed along the European margin, from northern Norway to the Gulf of Cadiz and into the Alboran Sea. Their discovery is a major achievement of the last few decades and their widespread occurrence presents a challenge to understand their development, preservation and possible importance in the geologic record.On the Norwegian shelf active/living reefs are developed on elevated hard substrata. Along the Irish margin L. pertusa builds large fossil and/or active carbonate mounds. In the Gulf of Cadiz and in the Alboran Sea buried reefs and patch reefs are generally found in association with mud volcanoes.In modern oceans, they provide important ecological niches for the marine benthic fauna in the deep-sea. In comparison to the macrofauna the microfauna, particularly the foraminifera associated to these systems, are poorly known. We present here a detailed study based on quantitative analyses of benthic and planktonic foraminifera together with the statistical treatment of assemblage data collected along the Norwegian margin, in the Porcupine-Rockall region and in the Alboran Sea.The three regions were and/or are site of cold-water coral ecosystems settlements. Our study reveals that in the Porcupine/Rockall region benthic foraminiferal assemblages are strictly related to the distribution of facies. On the Norwegian margin, benthic foraminiferal habitats are weakly defined and grade one into the other preventing the sharp facies separation observed along the Irish margin (Margreth et al., 2009). In the Alboran Sea cold-water coral ecosystems and cold-water carbonate mounds are presently buried and corals are generally fragmented. However, benthic assemblages from coral-rich layers in the Alboran Sea and those from Porcupine/Rockall and Norway show remarkable similarities. In particular, epifaunal-attached species such as Discanomalina coronata, Cibicides refulgens, and Lobatula lobatula dominate the assemblages with D. coronata restricted to living cold-water coral reefs facies only and/or in co-occurrence with coral fragments. In conclusion, our data suggest that although cold-water coral ecosystems occur at different latitudes, the associated foraminiferal assemblages are consistent from Norway to the Western Mediterranean. Thus they can be used to identify these ecosystems even in the geologic record, when the corals are often strongly dissolved like in the Alboran Sea

Construction of an integrated consensus map of the Apple genome based on four mapping populations

An integrated consensus genetic map for apple was constructed on the basis of segregation data from four genetically connected crosses (C1¿=¿Discovery × TN10-8, C2¿=¿Fiesta × Discovery, C3¿=¿Discovery × Prima, C4¿=¿Durello di Forli × Fiesta) with a total of 676 individuals using CarthaGene® software. First, integrated female¿male maps were built for each population using common female¿male simple sequence repeat markers (SSRs). Then, common SSRs over populations were used for the consensus map integration. The integrated consensus map consists of 1,046 markers, of which 159 are SSR markers, distributed over 17 linkage groups reflecting the basic chromosome number of apple. The total length of the integrated consensus map was 1,032 cM with a mean distance between adjacent loci of 1.1 cM. Markers were proportionally distributed over the 17 linkage groups (¿ 2¿=¿16.53, df¿=¿16, p¿=¿0.41). A non-uniform marker distribution was observed within all of the linkage groups (LGs). Clustering of markers at the same position (within a 1-cM window) was observed throughout LGs and consisted predominantly of only two to three linked markers. The four integrated female¿male maps showed a very good colinearity in marker order for their common markers, except for only two (CH01h01, CH05g03) and three (CH05a02z, NZ02b01, Lap-1) markers on LG17 and LG15, respectively. This integrated consensus map provides a framework for performing quantitative trait locus (QTL) detection in a multi-population design and evaluating the genetic background effect on QTL expression

The TNG Near Infrared Camera Spectrometer

NICS (acronym for Near Infrared Camera Spectrometer) is the near-infrared cooled camera-spectrometer that has been developed by the Arcetri Infrared Group at the Arcetri Astrophysical Observatory, in collaboration with the CAISMI-CNR for the TNG (the Italian National Telescope Galileo at La Palma, Canary Islands, Spain). As NICS is in its scientific commissioning phase, we report its observing capabilities in the near-infrared bands at the TNG, along with the measured performance and the limiting magnitudes. We also describe some technical details of the project, such as cryogenics, mechanics, and the system which executes data acquisition and control, along with the related software.Comment: 7 pages, 5 figures, compiled with A&A macros. A&A in pres

Improved cardiac performance with human calcitonin gene related peptide in patients with congestive heart failure

Study objective - The aim of the study was to assess the cardiovascular effects of human calcitonin gene related peptide (CGRP) in patients with congestive heart failure. Design - The effects of CGRP II (or β), 12.5 μg·h−1, given by intravenous infusion for 24 h to digitalised patients with congestive heart failure, were assessed by measurement of cardiac functional indices. Patients - Five patients (four female) were studied. Age was 73-82 years. Three were in New York Heart Association phase III and two in phase IV. Measurements and main results - The pre-ejection period to left ventricular ejection time ratio and the QT distance adjusted for heart rate were lowered by 21% and 4% respectively. The left ventricular shortening index was raised by 43%. The arterial pressure and heart rate did not change consistently. Conclusion - Calcitonin gene related peptide improves myocardial contractility in patients with congestive heart failure. This is the first time this has been show

Solid-phase synthesis of peptides containing reverse-turn mimetic bicyclic lactams

The solid-phase synthesis and characterization of a series of peptides (4-15) containing reverse-turn mimetic bicyclic lactams is reported. The bicyclic lactams (1a, 1b) possess high structural similarity to the two central residues of a Pturn. Amino acid conjugates of these bicyclic lactams were synthesized on solid supports following a g-fluorenylmethoxycarbonyl (FMOC) protection strategy on WangMerrifield resin. Coupling between amino acids was accomplished by means of diisopropylcarbodiimide (DIC)/ hydroxyazabenzotriazole (HOAt). Coupling between amino acids and the mimics was performed with the potent Carpino's reagent O-(7-azabenzotriazol-1-yl)-N,N,N',N'-tetramelhyluronium hexafluorophosphate (HATU). The final compounds were cleaved from the resin and obtained as N-acetylated methyl esters or benzyl amides

Synthesis and Conformational Studies of Peptidomimetics Containing a New Bifunctional Diketopiperazine Scaffold Acting as a \u3b2-Hairpin Inducer

A practical synthesis of a new bifunctional diketopiperazine (DKP) scaffold 1, formally derived from the cyclization of L-aspartic acid and (S)-2,3-diaminopropionic acid, is reported. DKP-1 bears a carboxylic acid and an amino functionalities in a cis relationship, which have been used to grow peptide sequences. Tetra-, penta-, and hexapeptidomimetic sequences were prepared by solution-phase peptide synthesis (Boc strategy). Conformational analysis of these derivatives was carried out by a combination of 1H NMR spectroscopy, IR spectroscopy, CD spectroscopy, and computer modeling, and reveals the formation of beta-hairpin mimics involving 10-membered and 18-membered H-bonded rings and a reverse turn of the growing peptide chain

The ATLAS barrel level-1 Muon Trigger Sector-Logic/RX off-detector trigger and acquisition board

The ATLAS experiment uses a system of three concentric layers of Resistive Plate Chambers (RPC) detector for the Level-1 Muon Trigger in the air-core barrel toroid region. The trigger algorithm looks for hit coincidences within different detector layers inside the programmable geometrical road which defines the transverse momentum cut. The on-detector electronics that provides the trigger and detector readout functionalities collects input signals coming from the RPC front-end. Trigger and readout data are then sent via optical fibres to the off-detector electronics. Six or seven optical fibres from one of the 64 trigger sectors go to one Sector-Logic/RX module, that later elaborates the collected trigger and readout data, and sends data respectively to the Read-Out Driver modules and to the Central Level-1 Trigger. We present the functionality and the implementation of the VME Sector-Logic/RX module, and the configuration of the system for the first cosmic ray data collected using this module