On the almost sure central limit theorem for ARX processes in adaptive tracking

The goal of this paper is to highlight the almost sure central limit theorem for martingales to the control community and to show the usefulness of this result for the system identification of controllable ARX(p,q) process in adaptive tracking. We also provide strongly consistent estimators of the even moments of the driven noise of a controllable ARX(p,q) process as well as quadratic strong laws for the average costs and estimation errors sequences. Our theoretical results are illustrated by numerical experiments

Identifiability of dynamical networks: which nodes need be measured?

Much recent research has dealt with the identifiability of a dynamical network in which the node signals are connected by causal linear time-invariant transfer functions and are possibly excited by known external excitation signals and/or unknown noise signals. So far all results on the identifiability of the whole network have assumed that all node signals are measured. Under this assumption, it has been shown that such networks are identifiable only if some prior knowledge is available about the structure of the network, in particular the structure of the excitation. In this paper we present the first results for the situation where not all node signals are measurable, under the assumptions that the topology of the network is known, that each node is excited by a known signal and that the nodes are noise-free. Using graph theoretical properties, we show that the transfer functions that can be identified depend essentially on the topology of the paths linking the corresponding vertices to the measured nodes. An important outcome of our research is that, under those assumptions, a network can often be identified using only a small subset of node measurements.Comment: extended version of an article to appear at the 56th IEEE Conference on Decision and Control, CDC 2017 8 pages, 2 style files, 3 pdf figures, 2 png figure

Relating the metatranscriptome and metagenome of the human gut

Although the composition of the human microbiome is now wellstudied, the microbiota’s \u3e8 million genes and their regulation remain largely uncharacterized. This knowledge gap is in part because of the difficulty of acquiring large numbers of samples amenable to functional studies of the microbiota. We conducted what is, to our knowledge, one of the first human microbiome studies in a well-phenotyped prospective cohort incorporating taxonomic, metagenomic, and metatranscriptomic profiling at multiple body sites using self-collected samples. Stool and saliva were provided by eight healthy subjects, with the former preserved by three different methods (freezing, ethanol, and RNAlater) to validate self-collection. Within-subject microbial species, gene, and transcript abundances were highly concordant across sampling methods, with only a small fraction of transcripts (\u3c5%) displaying between-method variation. Next, we investigated relationships between the oral and gut microbial communities, identifying a subset of abundant oral microbes that routinely survive transit to the gut, but with minimal transcriptional activity there. Finally, systematic comparison of the gut metagenome and metatranscriptome revealed that a substantial fraction (41%) of microbial transcripts were not differentially regulated relative to their genomic abundances. Of the remainder, consistently underexpressed pathways included sporulation and amino acid biosynthesis, whereas up-regulated pathways included ribosome biogenesis and methanogenesis. Across subjects, metatranscriptional profiles were significantly more individualized than DNA-level functional profiles, but less variable than microbial composition, indicative of subject-specific whole-community regulation. The results thus detail relationships between community genomic potential and gene expression in the gut, and establish the feasibility of metatranscriptomic investigations in subject-collected and shipped samples

A visual category filter for Google images

We extend the constellation model to include heterogeneous parts which may represent either the appearance or the geometry of a region of the object. The pans and their spatial configuration are learnt simultaneously and automatically, without supervision, from cluttered images. We describe how this model can be employed for ranking the output of an image search engine when searching for object categories. It is shown that visual consistencies in the output images can be identified, and then used to rank the images according to their closeness to the visual object category. Although the proportion of good images may be small, the algorithm is designed to be robust and is capable of learning in either a totally unsupervised manner, or with a very limited amount of supervision. We demonstrate the method on image sets returned by Google's image search for a number of object categories including bottles, camels, cars, horses, tigers and zebras

Tracking of structural and functional cardiac measures from infancy into school-age

Objective Cardiac structure and function are important predictors for cardiovascular disease in adults. Not much is known about tracking of cardiac measures, other than left ventricular mass, from early life onwards. We examined whether and to what extent cardiac measures track from infancy into school-age. Methods We performed a population-based prospective cohort study among 1072 children. Aortic root diameter, left atrial diameter, left ventricular mass, relative wall thickness and fractional shortening were measured repeatedly by echocardiography. We explored tracking between infancy (1.5, six and 24 months) and school-age (six and 10 years). Results Of all cardiac measures, aortic root diameter, left atrial diameter and left ventricular mass were significantly correlated between infancy and school-age (r = 0.10-0.42, all p-values < 0.01), with the strongest correlations between 24 months and 10 years. Of the different structures, aortic root diameter showed the strongest correlations. Approximately 30% of children who were in the lowest or highest quartile of a measure at the age of 1.5 months remained in that quartile at the age of 10 years. When analysing the effects of the infant cardiac measures on the same outcomes at 10 years in conditional regression models, we observed ef

What traits are carried on mobile genetic elements, and why?

Although similar to any other organism, prokaryotes can transfer genes vertically from mother cell to daughter cell, they can also exchange certain genes horizontally. Genes can move within and between genomes at fast rates because of mobile genetic elements (MGEs). Although mobile elements are fundamentally self-interested entities, and thus replicate for their own gain, they frequently carry genes beneficial for their hosts and/or the neighbours of their hosts. Many genes that are carried by mobile elements code for traits that are expressed outside of the cell. Such traits are involved in bacterial sociality, such as the production of public goods, which benefit a cell's neighbours, or the production of bacteriocins, which harm a cell's neighbours. In this study we review the patterns that are emerging in the types of genes carried by mobile elements, and discuss the evolutionary and ecological conditions under which mobile elements evolve to carry their peculiar mix of parasitic, beneficial and cooperative genes

Prosemantic features for content-based image retrieval

The final publication is available at Springer via http://dx.doi.org/10.1007/978-3-642-18449-9_8Revised Selected Papers of 7th International Workshop, AMR 2009, Madrid, Spain, September 24-25, 2009We present here, an image description approach based on prosemantic features. The images are represented by a set of low-level features related to their structure and color distribution. Those descriptions are fed to a battery of image classifiers trained to evaluate the membership of the images with respect to a set of 14 overlapping classes. Prosemantic features are obtained by packing together the scores. To verify the effectiveness of the approach, we designed a target search experiment in which both low-level and prosemantic features are embedded into a content-based image retrieval system exploiting relevance feedback. The experiments show that the use of prosemantic features allows for a more successful and quick retrieval of the query images