Depletion of RIPK3 or MLKL blocks TNF-driven necroptosis and switches towards a delayed RIPK1 kinase-dependent apoptosis

In human cells, the RIPK1-RIPK3-MLKL-PGAM5-Drp1 axis drives tumor necrosis factor (TNF)-induced necroptosis through mitochondrial fission, but whether this pathway is conserved among mammals is not known. To answer this question, we analyzed the presence and functionality of the reported necroptotic axis in mice. As in humans, knockdown of receptorinteracting kinase-3 (RIPK3) or mixed lineage kinase domain like (MLKL) blocks TNF-induced necroptosis in L929 fibrosarcoma cells. However, repression of either of these proteins did not protect the cells from death, but instead induced a switch from TNF-induced necroptosis to receptor-interacting kinase-1 (RIPK1) kinase-dependent apoptosis. In addition, although mitochondrial fission also occurs during TNF-induced necroptosis in L929 cells, we found that knockdown of phosphoglycerate mutase 5 (PGAM5) and dynamin 1 like protein (Drp1) did not markedly protect the cells from TNF-induced necroptosis. Depletion of Pink1, a reported interactor of both PGAM5 and Drp1, did not affect TNF-induced necroptosis. These results indicate that in these murine cells mitochondrial fission and Pink1 dependent processes, including Pink-Parkin dependent mitophagy, apparently do not promote necroptosis. Our data demonstrate that the core components of the necrosome (RIPK1, RIPK3 and MLKL) are crucial to induce TNF-dependent necroptosis both in human and in mouse cells, but the associated mechanisms may differ between the two species or cell types

Natural Isotopes and Ion Compositions Identify Changes in Groundwater Flows Affecting Wetland Vegetation in the Drentsche Aa Brook Valley, The Netherlands

This study uses groundwater isotopes and ion composition to verify model simulations and ecohydrological studies in the Drentsche Aa nature reserve in The Netherlands, which is representative for the northwestern wetland areas in the Ice Marginal Landscape zone. At eight field sites, a total of 24 samples were analysed for their 13C, 14C, 2H, and 18O isotopes and ionic composition. The isotopes indicate that most of the fen peatlands in the area depend on the exfiltration of sub-regional groundwater flows, which confirmed the previous model simulations and ecohydrological studies. At three sites, isotopes and ionic composition indicate that the groundwater from the sub-regional system has been replaced by local infiltrated rainwater, due to nearby groundwater abstractions for drinking water, which influenced the success rates of the restoration measures. Furthermore, the evidence from chloride and 14C contents was found to indicate the presence of more saline groundwater, which are influenced by the groundwater flows near salt diapirs. Groundwater abstractions may enhance the upward flow of the saline groundwater to eventually exfiltrate at the wetlands, affecting the biodiversity of the nature reserve

Vegetation Re-development After Fen Meadow Restoration by Topsoil Removal and Hay Transfer

We investigated the effects of different restoration treatments on the development of fen meadow communities: (1) depth of topsoil removal, with shallow (circa 20 cm) and deep (circa 40 cm) soil removal applied, (2) transfer of seed-containing hay, and (3) access of large animals. We carried out a full factorial experiment with all combinations of these factors and monitored it for 4 years. We studied the effect of seed availability in the soil seed bank on species abundance in the vegetation and compared it to the effect of species introduction by hay. We observed large differences in species composition between different treatments after 4 years. The combination of hay transfer, deep soil removal, and exclusion of large animals resulted in a community with highest similarity to the target vegetation. We found that the transfer of seeds with hay had a larger effect on species abundance than the soil seed bank. Hay transfer appeared to have important consequences on vegetation development because it speeded up the establishment of the target vegetation.

Hydrological landscape settings of base-rich fen mires and fen meadows:an overview

Question: Why do similar fen meadow communities occur in different landscapes? How does the hydrological system sustain base-rich fen mires and fen meadows? Location: Interdunal wetlands and heathland pools in The Netherlands, percolation mires in Germany, Poland, and Siberia, and calcareous spring fens in the High Tatra, Slovakia. Methods: This review presents an overview of the hydrological conditions of fen mires and fen meadows that are highly valued in nature conservation due to their high biodiversity and the occurrence of many Red List species. Fen types covered in this review include: (1) small hydrological systems in young calcareous dune areas, and (2) small hydrological systems in decalcified old cover sand areas in The Netherlands; (3) large hydrological systems in river valleys in Central-Europe and western-Siberia, and (4) large hydrological systems of small calcareous spring fens with active precipitation of travertine in mountain areas of Slovakia. Results: Different landscape types can sustain similar nutrient poor and base-rich habitats required by endangered fen meadow species. The hydrological systems of these landscapes are very different in size, but their groundwater flow pattern is remarkably similar. Paleo-ecological research showed that travertine forming fen vegetation types persisted in German lowland percolation mires from 6000 to 3000 BP. Similar vegetation types can still be found in small mountain mires in the Slovak Republic. Small pools in such mires form a cascade of surface water bodies that stimulate travertine formation in various ways. Travertine deposition prevents acidification of the mire and sustains populations of basiphilous species that elsewhere in Europe are highly endangered. Conclusion: Very different hydrological landscape settings can maintain a regular flow of groundwater through the top soil generating similar base-rich site conditions. This is why some fen species occur in very different landscape types, ranging from mineral interdunal wetlands to mountain mires

Cache as ca$h can

In this contribution several caching strategies for the World Wide Weba re studied. Special attention is paid to the so-called proxy placement, i.e. placing of caches on carefully selected nodes in the network near to the end users

8x8 Reconfigurable quantum photonic processor based on silicon nitride waveguides

The development of large-scale optical quantum information processing circuits ground on the stability and reconfigurability enabled by integrated photonics. We demonstrate a reconfigurable 8x8 integrated linear optical network based on silicon nitride waveguides for quantum information processing. Our processor implements a novel optical architecture enabling any arbitrary linear transformation and constitutes the largest programmable circuit reported so far on this platform. We validate a variety of photonic quantum information processing primitives, in the form of Hong-Ou-Mandel interference, bosonic coalescence/anticoalescence and high-dimensional single-photon quantum gates. We achieve fidelities that clearly demonstrate the promising future for large-scale photonic quantum information processing using low-loss silicon nitride.Comment: Added supplementary materials, extended introduction, new figures, results unchange