Why bean beer?

Beer can be a wholesome beverage, and the art of brewing beer has been intertwined with the development of civilised society for centuries. Today, the latest valuation of the economic value of beer (by accountants Ernst and Young in 2013), reported that Europe is the world’s biggest producer of beer with over 4,500 breweries delivering around 390 million hectolitres annually – which in plain English is 68,632,200,000 pints (since 1 hectolitre is a small spillage less than 176 imperial pints). The industry employs over 2 million people, and around 125,000 of these are employed in breweries themselves. It should also be no surprise then that sales generated 53 billion Euro, which is almost doubled again by the value added from the supply chain. Also, the EU brewing sector had a trade surplus (i.e. exports were greater than imports) to the value of 3 billion Euro in 2012. Beer is serious business

Data for life cycle assessment of legume biorefining for alcohol

Benchmarking the environmental sustainability of alcohol produced from legume starch against alcohol produced from cereal grains requires considering of crop production, nutrient cycling and use of protein-rich co-products via life cycle assessment. This article describes the mass balance flows behind the life cycle inventories for gin produced from wheat and peas (Pisum sativum L.) in an associated article summarising the environmental footprints of wheat- and pea-gin [1], and also presents detailed supplementary results. Activity data were collected from interviews with actors along the entire gin value chain including a distillery manager and ingredient and packaging suppliers. Important fertiliserand animal-feed substitution effects of co-product use were derived using detailed information and models on nutrient flows and animal feed composition, along with linear optimisation modelling. Secondary data on environmental burdens of specific materials and processes were obtained from the Ecoinvent v3.4 life cycle assessment database. This article provides a basis for further quantitative evaluation of the environmental sustainability of legume-alcohol value chains

Reactivation of hepatitis B virus with immune-escape mutations after ocrelizumab treatment for multiple sclerosis

Ocrelizumab is an anti-CD20 monoclonal antibody for the treatment of multiple sclerosis (MS) that is closely related to rituximab. We describe a case of hepatitis B virus (HBV) reactivation in an MS patient with resolved HBV infection receiving ocrelizumab. HBV reactivation was monitored with HBV-DNA and HBV surface antigen periodic assessment. Anti-HBV treatment with entecavir was started after HBV-DNA detection. Ocrelizumab can reactivate viral replication in patients with resolved HBV infection. HBV reactivation monitoring seems an effective and safe option for the management of these patients. More studies are needed to assess the optimal management of HBV reactivation in MS patients on ocrelizumab treatment

Just the tonic! Legume biorefining for alcohol has the potential to reduce Europe’s protein deficit and mitigate climate change

Industrialised agriculture is heavily reliant upon synthetic nitrogen fertilisers and imported protein feeds, posing environmental and food security challenges. Increasing the cultivation of leguminous crops that biologically fix nitrogen and provide high protein feed and food could help to address these challenges. We report on the innovative use of an important leguminous crop, pea (Pisum sativum L.), as a source of starch for alcohol (gin) production, yielding protein-rich animal feed as a co-product. We undertook life cycle assessment (LCA) to compare the environmental footprint of 1 L of packaged gin produced from either 1.43 kg of wheat grain or 2.42 kg of peas via fermentation and distillation into neutral spirit. Allocated environmental footprints for pea-gin were smaller than for wheat-gin across 12 of 14 environmental impact categories considered. Global warming, resource depletion, human toxicity, acidification and terrestrial eutrophication footprints were, respectively, 12%, 15%, 15%, 48% and 68% smaller, but direct land occupation was 112% greater, for pea-gin versus wheat-gin. Expansion of LCA boundaries indicated that co-products arising from the production of 1 L of wheat- or pea-gin could substitute up to 0.33 or 0.66 kg soybean animal feed, respectively, mitigating considerable greenhouse gas emissions associated with land clearing, cultivation, processing and transport of such feed. For pea-gin, this mitigation effect exceeds emissions from gin production and packaging, so that each L of bottled pea gin avoids 2.2 kg CO2 eq. There is great potential to scale the use of legume starches in production of alcoholic beverages and biofuels, reducing dependence on Latin American soybean associated with deforestation and offering considerable global mitigation potential in terms of climate change and nutrient leakage — estimated at circa 439 Tg CO2 eq. and 8.45 Tg N eq. annually

JC virus-DNA detection is associated with CD8 fffector accumulation in peripheral blood of patients with multiple sclerosis under natalizumab treatment, independently from JC virus serostatus

Although natalizumab (anti-α4 integrin) represents an effective therapy for relapsing remitting multiple sclerosis (RRMS), it is associated with an increased risk of developing progressive multifocal leukoencephalopathy (PML), caused by the polyomavirus JC (JCV). The aim of this study was to explore natalizumab-induced phenotypic changes in peripheral blood T-lymphocytes and their relationship with JCV reactivation. Forty-four patients affected by RRMS were enrolled. Blood and urine samples were classified according to natalizumab infusion number: 0 (N0), 1-12 (N12), 13-24 (N24), 25-36 (N36), and over 36 (N > 36) infusions. JCV-DNA was detected in plasma and urine. T-lymphocyte phenotype was evaluated with flow cytometry. JCV serostatus was assessed. Ten healthy donors (HD), whose ages and sexes matched with the RRMS patients of the N0 group, were enrolled. CD8 effector (CD8 E) percentages were increased in natalizumab treated patients with detectable JCV-DNA in plasma or urine compared to JCV-DNA negative patients (JCV-) (p < 0.01 and p < 0.001, resp.). Patients with CD8 E percentages above 10.4% tended to show detectable JCV-DNA in plasma and/or urine (ROC curve p = 0.001). The CD8 E was increased when JCV-DNA was detectable in plasma or urine, independently from JCV serology, for N12 and N24 groups (p < 0.01). As long as PML can affect RRMS patients under natalizumab treatment with a negative JCV serology, the assessment of CD8 E could help in the evaluation of JCV reactivation

About salience of sustainability assessments. The case of Life Cycle Thinking and food system trasnformation perspective

L'ampio riconoscimento di Life Cycle Assessment (LCA) come metodologia scientifica per la valutazione delle performance ambientali dei prodotti ha spianato la strada all’adozione del suo quadro analitico di base, il Life Cycle Thinking (LCT), come quadro metodologico per l'analisi della sostenibilità. Ma LCT è davvero in grado di rappresentare la diversità delle catene e dei sistemi alimentari? Questo documento mette in discussione l'utilità di LCT nella valutazione delle opzioni inquadrate in una prospettiva di trasformazione del sistema alimentare. Seguendo un approccio suggerito dalla scienza dell’informazione, LCT è stato esaminato criticamente per determinare la sua capacità di rappresentare e valutare le opzioni agro-ecologiche che mirano alle trasformazioni più profonde dei sistemi alimentari contemporanei. Nel fare ciò, questo documento propone una nuova interpretazione sistemica dei criteri epistemologici che giustificano la conoscenza prodotta dalle analisi di sostenibilità supportandola con una metodologia per l'analisi della salienza delle valutazioni di sostenibilità basate su LCT. I nostri risultati confermano le ipotesi già espresse in precedenza in letteratura secondo cui LCT non è appropriato per definire le opzioni agro-ecologiche per la trasformazione del sistema alimentare.The broad recognition of Life Cycle Assessment as a science-based methodology for environmental assessment of products has paved the way toward extending its underlying analytical framework, Life Cycle Thinking (LCT) into a methodological framework for sustainability analysis. But is it capable of capturing the diversity of food value chains and systems? This paper questions the utility of LCT in assessing options framed under a perspective of food system transformation. Following an informationbased approach, LCT has been critically examined for its capability in representing and assessing agroecological options aiming at more profound transformations of contemporary food systems. In doing so this paper proposes a new system-theoretic interpretation of the epistemological criteria that justifies knowledge produced by Sustainability Assessments (SA) supporting it by a methodology for analysing salience of LCT-based assessments. Our findings confirm hypotheses expressed earlier in the literature that LCT is not appropriate in framing agroecological options for food system transformation

Evidence of neutral transcriptome evolution in plants

The transcriptome of an organism is its set of gene transcripts (mRNAs) at a defined spatial and temporal locus. Because gene expression is affected markedly by environmental and developmental perturbations, it is widely assumed that transcriptome divergence among taxa represents adaptive phenotypic selection. This assumption has been challenged by neutral theories which propose that stochastic processes drive transcriptome evolution. To test for evidence of neutral transcriptome evolution in plants, we quantified 18 494 gene transcripts in nonsenescent leaves of 14 taxa of Brassicaceae using robust cross-species transcriptomics which includes a two-step physical and in silicobased normalization procedure based on DNA similarity among taxa. Transcriptome divergence correlates positively with evolutionary distance between taxa and with variation in gene expression among samples. Results are similar for pseudogenes and chloroplast genes evolving at different rates. Remarkably, variation in transcript abundance among root-cell samples correlates positively with transcriptome divergence among root tissues and among taxa. Because neutral processes affect transcriptome evolution in plants, many differences in gene expression among or within taxa may be nonfunctional, reflecting ancestral plasticity and founder effects. Appropriate null models are required when comparing transcriptomes in space and time

Natalizumab affects T-cell phenotype in multiple sclerosis: implications for JCV reactivation

The anti-CD49d monoclonal antibody natalizumab is currently an effective therapy against the relapsing-remitting form of multiple sclerosis (RRMS). Natalizumab therapeutic efficacy is limited by the reactivation of the John Cunningham polyomavirus (JCV) and development of progressive multifocal leukoencephalopathy (PML). To correlate natalizumab-induced phenotypic modifications of peripheral blood T-lymphocytes with JCV reactivation, JCV-specific antibodies (serum), JCV-DNA (blood and urine), CD49d expression and relative abundance of peripheral blood T-lymphocyte subsets were longitudinally assessed in 26 natalizumab-treated RRMS patients. Statistical analyses were performed using GraphPad Prism and R. Natalizumab treatment reduced CD49d expression on memory and effector subsets of peripheral blood T-lymphocytes. Moreover, accumulation of peripheral blood CD8+ memory and effector cells was observed after 12 and 24 months of treatment. CD4+ and CD8+ T-lymphocyte immune-activation was increased after 24 months of treatment. Higher percentages of CD8+ effectors were observed in subjects with detectable JCV-DNA. Natalizumab reduces CD49d expression on CD8+ T-lymphocyte memory and effector subsets, limiting their migration to the central nervous system and determining their accumulation in peripheral blood. Impairment of central nervous system immune surveillance and reactivation of latent JCV, can explain the increased risk of PML development in natalizumab-treated RRMS subjects

Towards a characterisation of the wild legume bitter vetch (Lathyrus linifolius L. (Reichard) Bassler): heteromorphic seed germination, root nodule structure and N-fixing rhizobial symbionts:heteromorphic seed germination, root nodule structure and N-fixing rhizobial symbionts

Lathyrus linifolius L. (Reichard) Bässler (bitter vetch) is a fabaceous nitrogen (N) fixing species. A coloniser of low nutrient (N) soils it supports biodiversity such as key moth and butterfly species and its roots are known for their organoleptic and claimed therapeutic properties. Thus, the species has high potential for restoration, conservation, novel cropping and as model species. The latter owing to its genetic synteny with important pulse crops. However, regeneration and functional attributes of L. linifolius remain to be characterised. Seeds of L. linifolius were characterised using physical, colourimetric and chemical data. Ultrastructural and functional characterisation of the N fixing root nodules included immunolabelling with nifH-protein antibodies (recognising the N fixing enzyme, nitrogenase). Endosymbiotic bacteria were isolated from the root nodules and characterised phylogenetically using 16S rRNA, nodA and nodD gene sequeneces. L. linifolius yielded hetermorphic seeds of distinct colour classes: green and brown. Seed morphotypes had similar carbon:N ratios and were equally germinable (ca. 90%) after scarification at differing optimal temperatures (16 and 20°C, respectively). Brown seeds were larger and comprised a larger proportion of the seed batch (69%). L. linifolius root nodules appeared indeterminate in structure, effective (capable of fixing atmospheric N) and accommodated strains with high similarity to Rhizobium leguminosarum biovar viciae. The findings and rhizobial isolates have potential application for ecological restoration and horticulture using native seeds. Also, the data and rhizobial resources have potential application in comparative and functional studies with related and socio-economically important crops such as Pisum, Lens and Vicia

Climate change and crop-pest dynamics in the Mediterranean Basin

A causa dei cambiamenti climatici valutare e gestire sistemi coltura-parassita nel Bacino del Mediterraneo sarà più difficile che altrove a livello globale. Il Bacino del Mediterraneo è infatti per molti versi un hot spot in termini di cambiamento globale, poiché in quest’area del pianeta i cambiamenti climatici attesi sono più intensi della media e minacciano una diversità biologica e culturale estremamente ricca ed intrecciata, oltre ad incrementare la vulnerabilità nei confronti delle invasioni biologiche. Di conseguenza per affrontare efficacemente i problemi causati da parassiti in questo hot spot sarà sempre più necessario un approccio olistico, tale da consentire un’analisi dettagliata di quelle complesse e spesso sfuggenti interazioni che sono alla base di ogni decisione sensata a livello di campo. Partendo da oltre trent’anni di progresso scientifico multidisciplinare ispirato a studi pionieristici effettuati presso l’Università della California, il progetto ENEA GlobalChangeBiology in collaborazione con CASAS Global sta sviluppando uno strumento interdisciplinare per descrivere in maniera meccanicistica (ossia descrivere processi mediante un modello), analizzare e gestire problemi agro-ecologici basandosi sul paradigma unificante che tutti gli organismi, esseri umani compresi, acquisiscono e allocano risorse mediante processi analoghi. Si tratta del paradigma delle analogie ecologiche che è intrinsecamente olistico. Recenti analisi sviluppate utilizzando questo paradigma mostrano come lo strumento messo a punto abbia fornito e continuerà a fornire alle agenzie governative la base scientifica necessaria per integrare la resilienza eco-sociale ai cambiamenti climatici in sistemi agricoli presenti nel Bacino del Mediterraneo e altrove.Climate change will make assessing and managing crop-pest systems in the Mediterranean Basin more difficult than elsewhere on the globe. The Basin is in many ways a hot spot of global change, as higher than average projected climate change threatens an extremely rich and intertwined biological and cultural diversity, and increases its vulnerability to biological invasions. As a consequence, pest problems in this hot spot will require a holistic approach to deconstruct the elusive complex interactions that are the underpinning basis for sound decision making at the field level. Building on 30+ years of multidisciplinary progress inspired by pioneering work at University of California, the ENEA GlobalChangeBiology project in collaboration with CASAS Global is developing an interdisciplinary tool to mechanistically describe (i.e., model), analyze and manage agro-ecological problems based on the unifying paradigm that all organisms including humans acquire and allocate resources by analogous processes – the paradigm of ecological analogies that is holistic by design. Recent analyses using this approach show how the tool provided and will continue to provide governmental agencies with the scientific basis for building eco-social resilience to climate warming into agricultural systems across the Mediterranean Basin and elsewhere