Rainfall but not selective logging affect changes in abundance of tropical forest butterfly in Sabah, Borneo

We investigated the effects of rainfall on the distribution and abundance of the satyrine butterfly Ragadia makuta in selectively logged and unlogged forest on Borneo. In 1997-98, there was a severe El Nino-Southern Oscillation (ENSO) drought, and annual surveys over a 4-y period showed that abundance of R. makuta was greatly reduced during the drought, but that populations quickly recovered after it. Monthly surveys over a 12-mo period of typical rainfall showed that high rainfall in the month preceding surveys significantly reduced butterfly abundance. Butterfly abundance and distribution did not differ between selectively logged and unlogged areas in either monthly or annual surveys and there was no difference between selectively logged and unlogged areas in the pattern of post-drought recovery. These results indicate that the abundance of R. makuta was significantly reduced both after high rainfall and during severe drought, but that these impacts were short-lived and were not affected by habitat disturbance. ENSO droughts on Borneo naturally often lead to widespread forest fires and thus impacts of ENSO events for butterflies are more likely to be due to indirect effects of habitat loss, rather than direct effects of drought on butterfly population dynamics

The role of antiphase boundaries during ion sputtering and solid phase epitaxy of Si(001)

The Si(001) surface morphology during ion sputtering at elevated temperatures and solid phase epitaxy following ion sputtering at room temperature has been investigated using scanning tunneling microscopy. Two types of antiphase boundaries form on Si(001) surfaces during ion sputtering and solid phase epitaxy. One type of antiphase boundary, the AP2 antiphase boundary, contributes to the surface roughening. AP2 antiphase boundaries are stable up to 973K, and ion sputtering and solid phase epitaxy performed at 973K result in atomically flat Si(001) surfaces.Comment: 16 pages, 4 figures, to be published in Surface Scienc

A Neural Model of Biased Oscillations in Aplysia Head-Waving Behavior

A long-term bias in the exploratory head-waving behavior of Aplysia can be induced using bright lights as an aversive stimulus: coupling onset of the lights with head movements to one side results in a bias away from that side (Cook & Carew, 1986). This bias has been interpreted as a form of operant conditioning, and has previously been simulated with a neural network model based on associative synaptic facilitation (Raymond, Baxter, Buonomano, & Byrne, 1992). In this article we simulate the head-waving behavior using a recurrent gated dipole, a nonlinear dynamical neural model that has previously been used to explain various data including oscillatory behavior in biological pacemakers. Within the recurrent gated dipole, two channels operate antagonistically to generate oscillations, which drive the side-to-side head waving. The frequency of oscillations depends on transmitter mobilization dynamics, which exhibit both short- and long-term adaptation. We assume that light onset results in a nonspecific increase in arousal to both channels of the dipole. Repeated pairing of arousal increments with activation of one channel (the "reinforced" channel) of the dipole leads to a bias in transmitter dynamics, which causes the oscillation to last a shorter time on the reinforced channel than on the non-reinforced channel. Our model provides a parsimonious explanation of the observed behavior, and it avoids some of the unexpected results obtained with the Raymond et al. model. In addition, our model makes predictions concerning the rate of onset and extinction of the biases, and it suggests new lines of experimentation to test the nature of the head-waving behavior.Office of Naval Research (N00014-92-J-4015, N00014-91-J-4100, N0014-92-J-1309); Air Force Office of Scientific Research (F49620-92-J-0499); A.P. Sloan Foundation (BR-3122

Temporal variation in abundance and diversity of butterflies in Bornean rain forests: opposite impacts of logging recorded in different seasons

We used traps baited with fruit to examine how the temporal variation of butterflies within primary forest in Sabah, Borneo differed between species. In addition, we compared patterns of temporal variation in primary and selectively logged forest, and we tested the hypothesis that selective logging has different recorded impacts on species diversity of adults during the wet monsoon period and the drier remaining half of the year. Species of Satyrinae and Morphinae had significantly less-restricted flight periods than did species of Nymphalinae and Charaxinae, which were sampled mainly during the drier season. especially in primary forest. Species diversity of adults was significantly higher during the drier season in primary forest, but did not differ between seasons in logged forest. As a consequence, logging had opposite recorded impacts on diversity during wetter and drier seasons: primary forest had significantly higher diversity than logged forest during the drier season but significantly lower diversity than logged forest during the wetter monsoon season. The results of this study have important implications for the assessment of biodiversity in tropical rain forests, particularly in relation to habitat disturbance: short-term assessments that do not take account of seasonal variation in abundance are likely to produce misleading results, even in regions where the seasonal variation in rainfall is not that great

Randomised clinical trial: the long‐term safety and tolerability of naloxegol in patients with pain and opioid‐induced constipation

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/108643/1/apt12899.pd

Butterfly dispersal and longevity in unlogged and selectively logged forest

This study investigated butterfly dispersal and longevity in unlogged and selectively logged forest in lowland dipterocarp rainforest Sabah, Malaysia (Borneo). Fruit-baited traps were used to survey butterflies in unlogged forest and forest that had been selectively logged 10-12 years previously in 1988 and 1989. The study focused on butterflies in the subfamilies Satyrinae, Nymphalinae, Morphinae and Charaxinae of the family Nymphalidae. Traps were set up along four transects on existing paths and trails in unlogged forest (two transects, total length 4 km) and logged forest (two transects, total length 4 km). Traps were hung 1-2 m from the ground at 100 m intervals along transects (total of 80 traps). Traps were operated for 12 days each month (October 1999-September 2000). Dispersal and longevity were investigated in several of the more abundant species. Dispersal and longevity were investigated in seevral of the more abundant species. Dispersal and longevity were investigated in several of the more abundant species. Dispersal and longevity did not differ between habitats or sexes but did differ between species in relation to body size and subfamily. The maximum distance moved by an individual in this study was 4670m and the maximum lifespan was 175 days (Bassarona dunya in both cases)

Preparation of atomically clean and flat Si(100) surfaces by low-energy ion sputtering and low-temperature annealing

Si(100) surfaces were prepared by wet-chemical etching followed by 0.3-1.5keV Ar ion sputtering, either at elevated or room temperature. After a brief anneal under ultrahigh vacuum conditions, the resulting surfaces were examined by scanning tunneling microscopy. We find that wet-chemical etching alone cannot produce a clean and flat Si(100) surface. However, subsequent 300eV Ar ion sputtering at room temperature followed by a 973K anneal yields atomically clean and flat Si(100) surfaces suitable for nanoscale device fabrication.Comment: 13 pages, 3 figures, to be published in Applied Surface Scienc

Safety and patient outcomes with lubiprostone for up to 52 weeks in patients with irritable bowel syndrome with constipation

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/90244/1/apt4983.pd

Soup to tree: the phylogeny of beetles inferred by mitochondrial metagenomics of a Bornean rainforest sample

In spite of the growth of molecular ecology, systematics and next-generation sequencing, the discovery and analysis of diversity is not currently integrated with building the tree-of-life. Tropical arthropod ecologists are well placed to accelerate this process if all specimens obtained via masstrapping, many of which will be new species, could be incorporated routinely in phylogeny reconstruction. Here we test a shotgun sequencing approach, whereby mitochondrial genomes are assembled from complex ecological mixtures via mitochondrial metagenomics, and demonstrate how the approach overcomes many of the taxonomic impediments to the study of biodiversity. DNA from ~500 beetle specimens, originating from a single rainforest canopy fogging sample from Borneo, was pooled and shotgun sequenced, followed by de novo assembly of complete and partial mitogenomes for 175 species. The phylogenetic tree obtained from this local sample was highly similar to that from existing mitogenomes selected for global coverage of major lineages of Coleoptera. When all sequences were combined, only minor topological changes are induced against this reference set, indicating an increasingly stable estimate of coleopteran phylogeny, whilst the ecological sample expands the tip-level representation of several lineages. Robust trees generated from ecological samples now enable an evolutionary framework for ecology. Meanwhile, the inclusion of uncharacterized samples in the tree-of-life rapidly expands taxon and biogeographic representation of lineages without morphological identification. Mitogenomes from shotgun sequencing of unsorted environmental samples and their associated metadata, placed robustly into the phylogenetic tree, constitute novel DNA ‘superbarcodes’ for testing hypotheses regarding global patterns of diversity

Nonlinear Measures for Characterizing Rough Surface Morphologies

We develop a new approach to characterizing the morphology of rough surfaces based on the analysis of the scaling properties of contour loops, i.e. loops of constant height. Given a height profile of the surface we perform independent measurements of the fractal dimension of contour loops, and the exponent that characterizes their size distribution. Scaling formulas are derived and used to relate these two geometrical exponents to the roughness exponent of a self-affine surface, thus providing independent measurements of this important quantity. Furthermore, we define the scale dependent curvature and demonstrate that by measuring its third moment departures of the height fluctuations from Gaussian behavior can be ascertained. These nonlinear measures are used to characterize the morphology of computer generated Gaussian rough surfaces, surfaces obtained in numerical simulations of a simple growth model, and surfaces observed by scanning-tunneling-microscopes. For experimentally realized surfaces the self-affine scaling is cut off by a correlation length, and we generalize our theory of contour loops to take this into account.Comment: 39 pages and 18 figures included; comments to [email protected]