Connectionist Theory Refinement: Genetically Searching the Space of Network Topologies

An algorithm that learns from a set of examples should ideally be able to exploit the available resources of (a) abundant computing power and (b) domain-specific knowledge to improve its ability to generalize. Connectionist theory-refinement systems, which use background knowledge to select a neural network's topology and initial weights, have proven to be effective at exploiting domain-specific knowledge; however, most do not exploit available computing power. This weakness occurs because they lack the ability to refine the topology of the neural networks they produce, thereby limiting generalization, especially when given impoverished domain theories. We present the REGENT algorithm which uses (a) domain-specific knowledge to help create an initial population of knowledge-based neural networks and (b) genetic operators of crossover and mutation (specifically designed for knowledge-based networks) to continually search for better network topologies. Experiments on three real-world domains indicate that our new algorithm is able to significantly increase generalization compared to a standard connectionist theory-refinement system, as well as our previous algorithm for growing knowledge-based networks.Comment: See http://www.jair.org/ for any accompanying file

The influence of distraction on speech processing: How selective is selective attention?

-* indicates shared first authorship - The present study investigated the effects of selective attention on the processing of morphosyntactic errors in unattended parts of speech. Two groups of German native (L1) speakers participated in the present study. Participants listened to sentences in which irregular verbs were manipulated in three different conditions (correct, incorrect but attested ablaut pattern, incorrect and crosslinguistically unattested ablaut pattern). In order to track fast dynamic neural reactions to the stimuli, electroencephalography was used. After each sentence, participants in Experiment 1 performed a semantic judgement task, which deliberately distracted the participants from the syntactic manipulations and directed their attention to the semantic content of the sentence. In Experiment 2, participants carried out a syntactic judgement task, which put their attention on the critical stimuli. The use of two different attentional tasks allowed for investigating the impact of selective attention on speech processing and whether morphosyntactic processing steps are performed automatically. In Experiment 2, the incorrect attested condition elicited a larger N400 component compared to the correct condition, whereas in Experiment 1 no differences between conditions were found. These results suggest that the processing of morphosyntactic violations in irregular verbs is not entirely automatic but seems to be strongly affected by selective attention

Signatures of Interchange Reconnection: STEREO, ACE and Hinode Observations Combined

Combining STEREO, ACE and Hinode observations has presented an opportunity to follow a filament eruption and coronal mass ejection (CME) on the 17th of October 2007 from an active region (AR) inside a coronal hole (CH) into the heliosphere. This particular combination of `open' and closed magnetic topologies provides an ideal scenario for interchange reconnection to take place. With Hinode and STEREO data we were able to identify the emergence time and type of structure seen in the in-situ data four days later. On the 21st, ACE observed in-situ the passage of an ICME with `open' magnetic topology. The magnetic field configuration of the source, a mature AR located inside an equatorial CH, has important implications for the solar and interplanetary signatures of the eruption. We interpret the formation of an `anemone' structure of the erupting AR and the passage in-situ of the ICME being disconnected at one leg, as manifested by uni-directional suprathermal electron flux in the ICME, to be a direct result of interchange reconnection between closed loops of the CME originating from the AR and `open' field lines of the surrounding CH.Comment: 13 pages, 13 figures, accepted Annales Geophysica

Limb imaging of the Venus O2 visible nightglow with the Venus Monitoring Camera

We investigated the Venus O2 visible nightglow with imagery from the Venus Monitoring Camera on Venus Express. Drawing from data collected between April 2007 and January 2011, we study the global distribution of this emission, discovered in the late 70s by the Venera 9 and 10 missions. The inferred limb-viewing intensities are on the order of 150 kiloRayleighs at the lower latitudes and seem to drop somewhat towards the poles. The emission is generally stable, although there are episodes when the intensities rise up to 500 kR. We compare a set of Venus Monitoring Camera observations with coincident measurements of the O2 nightglow at 1.27 {\mu}m made with the Visible and Infrared Thermal Imaging Spectrometer, also on Venus Express. From the evidence gathered in this and past works, we suggest a direct correlation between the instantaneous emissions from the two O2 nightglow systems. Possible implications regarding the uncertain origin of the atomic oxygen green line at 557.7 nm are noted.Comment: 7 pages, 3 figure

Monitoring Backbone Hydrogen-Bond Formation in β-Barrel Membrane Protein Folding

β-barrel membrane proteins are key components of the outer membrane of bacteria, mitochondria and chloroplasts. Their three-dimensional structure is defined by a network of backbone hydrogen bonds between adjacent β-strands. Here, we employ hydrogen-deuterium (H/D) exchange in combination with NMR spectroscopy and mass spectrometry to monitor backbone hydrogen bond formation during folding of the outer membrane protein X (OmpX) from E. coli in detergent micelles. Residue-specific kinetics of interstrand hydrogen-bond formation were found to be uniform in the entire β-barrel and synchronized to formation of the tertiary structure. OmpX folding thus propagates via a long-lived conformational ensemble state in which all backbone amide protons exchange with the solvent and engage in hydrogen bonds only transiently. Stable formation of the entire OmpX hydrogen bond network occurs downhill of the rate-limiting transition state and thus appears cooperative on the overall folding time scale

Using airborne LiDAR Survey to explore historic-era archaeological landscapes of Montserrat in the eastern Caribbean

This article describes what appears to be the first archaeological application of airborne LiDAR survey to historic-era landscapes in the Caribbean archipelago, on the island of Montserrat. LiDAR is proving invaluable in extending the reach of traditional pedestrian survey into less favorable areas, such as those covered by dense neotropical forest and by ashfall from the past two decades of active eruptions by the Soufrière Hills volcano, and to sites in localities that are inaccessible on account of volcanic dangers. Emphasis is placed on two aspects of the research: first, the importance of ongoing, real-time interaction between the LiDAR analyst and the archaeological team in the field; and second, the advantages of exploiting the full potential of the three-dimensional LiDAR point cloud data for purposes of the visualization of archaeological sites and features