548 research outputs found
Robust nanopatterning by laser-induced dewetting of metal nanofilms
We have observed nanopattern formation with robust and controllable spatial
ordering by laser-induced dewetting in nanoscopic metal films. Pattern
evolution in Co film of thickness 1\leq h\leq8 nm on SiO_{2} was achieved under
multiple pulse irradiation using a 9 ns pulse laser. Dewetting leads to the
formation of cellular patterns which evolve into polygons that eventually break
up into nanoparticles with monomodal size distribution and short range ordering
in nearest-neighbour spacing R. Spatial ordering was attributed to a
hydrodynamic thin film instability and resulted in a predictable variation of R
and particle diameter D with h. The length scales R and D were found to be
independent of the laser energy. These results suggest that spatially ordered
metal nanoparticles can be robustly assembled by laser-induced dewetting
Self-organized metal nanostructures through laser driven thermocapillary convection
When ultrathin metal films are subjected to multiple cycles of rapid melting
and resolidification by a ns pulsed laser, spatially correlated interfacial
nanostructures can result from a competition among several possible thin film
self-organizing processes. Here we investigate self-organization and the
ensuing length scales when Co films (1-8 nm thick) on SiO_{\text{2}} surfaces
are repeatedly and rapidly melted by non-uniform (interference) laser
irradiation. Pattern evolution produces nanowires, which eventually break-up
into nanoparticles exhibiting spatial order in the nearest neighbor spacing,
\lambda_{NN2}.The scaling behavior is consistent with pattern formation by
thermocapillary flow and a Rayleigh-like instability. For h_{0}\leq2 nm, a
hydrodynamic instability of a spinodally unstable film leads to the formation
of nanoparticles.Comment: 10 pages, 3 figure
Cloning, overexpression, crystallization and preliminary X-ray crystallographic analysis of a slow-processing mutant of penicillin G acylase from Kluyvera citrophila
Kluyvera citrophila penicillin G acylase (KcPGA) has recently attracted increased attention relative to the well studied and commonly used Escherichia coli PGA (EcPGA) because KcPGA is more resilient to harsh conditions and is easier to immobilize for the industrial hydrolysis of natural penicillins to generate the 6-aminopenicillin (6-APA) nucleus, which is the starting material for semi-synthetic antibiotic production. Like other penicillin acylases, KcPGA is synthesized as a single-chain inactive pro-PGA, which upon autocatalytic processing becomes an active heterodimer of α and β chains. Here, the cloning of the pac gene encoding KcPGA and the preparation of a slow-processing mutant precursor are reported. The purification, crystallization and preliminary X-ray analysis of crystals of this precursor protein are described. The protein crystallized in two different space groups, P1, with unit-cell parameters a = 54.0, b = 124.6, c = 135.1 Å, α= 104.1, β= 101.4, γ= 96.5°, and C2, with unit-cell parameters a = 265.1, b = 54.0, c = 249.2 Å, β= 104.4°, using the sitting-drop vapour-diffusion method. Diffraction data were collected at 100 K and the phases were determined using the molecular-replacement method. The initial maps revealed electron density for the spacer peptide
The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation
In bacteria, two signal-sequence-dependent secretion pathways translocate proteins across the cytoplasmic membrane. Although the mechanism of the ubiquitous general secretory pathway is becoming well understood, that of the twin-arginine translocation pathway, responsible for translocation of folded proteins across the bilayer, is more mysterious. TatC, the largest and most conserved of three integral membrane components, provides the initial binding site of the signal sequence prior to pore assembly. Here, we present two crystal structures of TatC from the thermophilic bacteria Aquifex aeolicus at 4.0 Å and 6.8 Å resolution. The membrane architecture of TatC includes a glove-shaped structure with a lipid-exposed pocket predicted by molecular dynamics to distort the membrane. Correlating the biochemical literature to these results suggests that the signal sequence binds in this pocket, leading to structural changes that facilitate higher order assemblies
Stabilization of Hydrodynamic Flows by Small Viscosity Variations
Motivated by the large effect of turbulent drag reduction by minute
concentrations of polymers we study the effects of a weakly space-dependent
viscosity on the stability of hydrodynamic flows. In a recent Letter [Phys.
Rev. Lett. {\bf 87}, 174501, (2001)] we exposed the crucial role played by a
localized region where the energy of fluctuations is produced by interactions
with the mean flow (the "critical layer"). We showed that a layer of weakly
space-dependent viscosity placed near the critical layer can have a very large
stabilizing effect on hydrodynamic fluctuations, retarding significantly the
onset of turbulence. In this paper we extend these observation in two
directions: first we show that the strong stabilization of the primary
instability is also obtained when the viscosity profile is realistic (inferred
from simulations of turbulent flows with a small concentration of polymers).
Second, we analyze the secondary instability (around the time-dependent primary
instability) and find similar strong stabilization. Since the secondary
instability develops around a time-dependent solution and is three-dimensional,
this brings us closer to the turbulent case. We reiterate that the large effect
is {\em not} due to a modified dissipation (as is assumed in some theories of
drag reduction), but due to reduced energy intake from the mean flow to the
fluctuations. We propose that similar physics act in turbulent drag reduction.Comment: 10 pages, 17 figs., REVTeX4, PRE, submitte
Investigation of pulsed laser induced dewetting in nanoscopic metal films
Hydrodynamic pattern formation (PF) and dewetting resulting from pulsed laser
induced melting of nanoscopic metal films have been used to create spatially
ordered metal nanoparticle arrays with monomodal size distribution on
SiO_{\text{2}}/Si substrates. PF was investigated for film thickness h\leq7 nm
< laser absorption depth \sim11 nm and different sets of laser parameters,
including energy density E and the irradiation time, as measured by the number
of pulses n. PF was only observed to occur for E\geq E_{m}, where E_{m} denotes
the h-dependent threshold energy required to melt the film. Even at such small
length scales, theoretical predictions for E_{m} obtained from a
continuum-level lumped parameter heat transfer model for the film temperature,
coupled with the 1-D transient heat equation for the substrate phase, were
consistent with experimental observations provided that the thickness
dependence of the reflectivity of the metal-substrate bilayer was incorporated
into the analysis. The spacing between the nanoparticles and the particle
diameter were found to increase as h^{2} and h^{5/3} respectively, which is
consistent with the predictions of the thin film hydrodynamic (TFH) dewetting
theory. These results suggest that fast thermal processing can lead to novel
pattern formation, including quenching of a wide range of length scales and
morphologies.Comment: 36 pages, 11 figures, 1 tabl
Megaesophagus in a Line of Transgenic Rats: A Model of Achalasia
Megaesophagus is defined as the abnormal enlargement or dilatation of the esophagus, characterized by a lack of normal contraction of the esophageal walls. This is called achalasia when associated with reduced or no relaxation of the lower esophageal sphincter (LES). To date, there are few naturally occurring models for this disease. A colony of transgenic (Pvrl3-Cre) rats presented with megaesophagus at 3 to 4 months of age; further breeding studies revealed a prevalence of 90% of transgene-positive animals having megaesophagus. Affected rats could be maintained on a total liquid diet long term and were shown to display the classic features of dilated esophagus, closed lower esophageal sphincter, and abnormal contractions on contrast radiography and fluoroscopy. Histologically, the findings of muscle degeneration, inflammation, and a reduced number of myenteric ganglia in the esophagus combined with ultrastructural lesions of muscle fiber disarray and mitochondrial changes in the striated muscle of these animals closely mimic that seen in the human condition. Muscle contractile studies looking at the response of the lower esophageal sphincter and fundus to electrical field stimulation, sodium nitroprusside, and L-nitro-L-arginine methyl ester also demonstrate the similarity between megaesophagus in the transgenic rats and patients with achalasia. No primary cause for megaesophagus was found, but the close parallel to the human form of the disease, as well as ease of care and manipulation of these rats, makes this a suitable model to better understand the etiology of achalasia as well as study new management and treatment options for this incurable condition.National Institutes of Health (U.S.) (Grant T32OD011141)National Institutes of Health (U.S.) (Grant P30ES002109
Self-similar shear-thickening behavior in CTAB/NaSal surfactant solutions
The effect of salt concentration Cs on the critical shear rate required for
the onset of shear thickening and apparent relaxation time of the
shear-thickened phase, has been investigated systematically for dilute
CTAB/NaSal solutions. Experimental data suggest a self-similar behavior of the
critical shear rate and relaxation time as functions of Cs. Specifically, the
former ~ Cs^(-6) whereas the latter ~ Cs^(6) such that an effective Weissenberg
number for the onset of the shear thickened phase is only weakly dependent on
Cs. A procedure has been developed to collapse the apparent shear viscosity
versus shear rate data obtained for various values of Cs into a single master
curve. The effect of Cs on the elastic modulus and mesh size of the
shear-induced gel phase for different surfactant concentrations is discussed.
Experiments performed using different flow cells (Couette and cone-and-plate)
show that the critical shear rate, relaxation time and the maximum viscosity
attained are geometry-independent. The elastic modulus of the gel phase
inferred indirectly by employing simplified hydrodynamic instability analysis
of a sheared gel-fluid interface is in qualitative agreement with that
predicted for an entangled phase of living polymers. A qualitative mechanism
that combines the effect of Cs on average micelle length and Debye parameter
with shear-induced configurational changes of rod-like micelles is proposed to
rationalize the self-similarity of SIS formation.Comment: 27 pages, 17 figure
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