COVID-19 and cancer registries: Learning from the first peak of the SARS-CoV-2 pandemic

The SARS-Cov-2 pandemic in 2020 has caused oncology teams around the world to adapt their practice in the aim of protecting patients. Early evidence from China indicated that patients with cancer, and particularly those who had recently received chemotherapy or surgery, were at increased risk of adverse outcomes following SARS-Cov-2 infection. Many registries of cancer patients infected with SARS-Cov-2 emerged during the first wave. We collate the evidence from these national and international studies and focus on the risk factors for patients with solid cancers and the contribution of systemic anti-cancer treatments (SACT-chemotherapy, immunotherapy, targeted and hormone therapy) to outcomes following SARS-Cov-2 infection. Patients with cancer infected with SARS-Cov-2 have a higher probability of death compared with patients without cancer. Common risk factors for mortality following COVID-19 include age, male sex, smoking history, number of comorbidities and poor performance status. Oncological features that may predict for worse outcomes include tumour stage, disease trajectory and lung cancer. Most studies did not identify an association between SACT and adverse outcomes. Recent data suggest that the timing of receipt of SACT may be associated with risk of mortality. Ongoing recruitment to these registries will enable us to provide evidence-based care

Phenotypic and genotypic diversity of wine yeasts used for acidic musts

The aim of this study was to examine the physiological and genetic stability of the industrial wine yeasts Saccharomyces cerevisiae and Saccharomyces bayanus var. uvarum under acidic stress during fermentation. The yeasts were sub-cultured in aerobic or fermentative conditions in media with or without l-malic acid. Changes in the biochemical profiles, karyotypes, and mitochondrial DNA profiles were assessed after minimum 50 generations. All yeast segregates showed a tendency to increase the range of compounds used as sole carbon sources. The wild strains and their segregates were aneuploidal or diploidal. One of the four strains of S. cerevisiae did not reveal any changes in the electrophoretic profiles of chromosomal and mitochondrial DNA, irrespective of culture conditions. The extent of genomic changes in the other yeasts was strain-dependent. In the karyotypes of the segregates, the loss of up to 2 and the appearance up to 3 bands was noted. The changes in their mtDNA patterns were much broader, reaching 5 missing and 10 additional bands. The only exception was S. bayanus var. uvarum Y.00779, characterized by significantly greater genome plasticity only under fermentative stress. Changes in karyotypes and mtDNA profiles prove that fermentative stress is the main driving force of the adaptive evolution of the yeasts. l-malic acid does not influence the extent of genomic changes and the resistance of wine yeasts exhibiting increased demalication activity to acidic stress is rather related to their ability to decompose this acid. The phenotypic changes in segregates, which were found even in yeasts that did not reveal deviations in their DNA profiles, show that phenotypic characterization may be misleading in wine yeast identification. Because of yeast gross genomic diversity, karyotyping even though it does not seem to be a good discriminative tool, can be useful in determining the stability of wine yeasts. Restriction analysis of mitochondrial DNA appears to be a more sensitive method allowing for an early detection of genotypic changes in yeasts. Thus, if both of these methods are applied, it is possible to conduct the quick routine assessment of wine yeast stability in pure culture collections depositing industrial strains

FERRAMENTAS MATEMÁTICAS, SUSCETIBILIDADE MAGNÉTICA E MODELOS DE PAISAGEM APLICADOS NA DELIMITAÇÃO DE ÁREAS DE MANEJO ESPECÍFICO

A identificação de padrões de variabilidade dos atributos do solo permite o uso e a ocupação do solo de maneira sustentável. O objetivo deste trabalho foi delimitar áreas de manejo específico utilizando ferramentas matemáticas, suscetibilidade magnética e modelos de paisagem. A área de estudo localiza-se no município de Guariba, SP. Escolheu-se uma área de 110 ha, onde foram identificadas e mapeadas três superfícies geomórficas (I, II e III). Na área, foram coletadas 204 amostras de solo em uma transeção, nas profundidades de 0,00-0,20 e 0,60-0,80 m. Foram determinados o pH em CaCl2, os teores de areia, argila, matéria orgânica, P, Ca, Mg, K, H+Al, e calculados SB, CTC e V. A suscetibilidade magnética (SM) foi medida com o auxílio de uma balança analítica. Os limites matemáticos da técnica Split Moving Windows Dissimilarity Analysis (SMWDA) utilizando as informações da suscetibilidade magnética ficaram próximos aos limites de campo identificados com base nos modelos de paisagem. A utilização conjunta da suscetibilidade magnética, dos modelos matemáticos e de paisagem permitiu identificar diferentes áreas de manejo, locais com diferentes teores de argila e níveis de fertilidade do solo. A susceptibilidade magnética pode ser adotada como alternativa para identificar e mapear unidades de manejo

Spatio-temporal nested patterns in macroinvertebrate assemblages across a pond network with a wide hydroperiod range

Nestedness has been widely used to measure the structure of biological communities and occurs when species-poor sites contain subsets of species-rich ones. Here, we examine nested patterns across the macroinvertebrate assemblages of 91 ponds in Doñana National Park, Spain, and explore temporal variation of nestedness and species richness in 19 temporary ponds over 2 years with differing rainfall. Macroinvertebrate assemblages were significantly nested; both pond spatial arrangement and environmental variation being important in driving nested patterns. Despite the nested structure observed, a number of taxa and ponds deviate from this pattern (termed idiosyncratic), by occurring more frequently than expected in species-poor sites, or having assemblages dominated by species largely absent from species-rich sites. Aquatic adults of winged insects, capable of dispersal, were more highly nested than non-dispersing taxa and life-history stages. Idiosyncratic taxa were found in ponds spanning a wide range of hydroperiods, although nestedness was higher in more permanent waterbodies. Monthly sampling demonstrated a gradual increase of species richness and nestedness from pond filling to April-May, when the most temporary ponds started to dry. Although the degree of nestedness of individual pond assemblages varied from month to month, the overall degree of nestedness in the two study years was practically identical despite marked differences in hydroperiod. Our results suggest that differential colonization and environmental variation are key processes driving the nested structure of Doñana ponds, that macroinvertebrate assemblages change in a predictable manner each year in response to cycles of pond wetting and drying, and that connectivity and environmental variability maintain biodiversity in pond networks. © 2010 Springer-Verlag.Peer Reviewe

Estimation of empirical rainfall thresholds for landslide triggering using partial duration series and their relation with climatic cycles. An application in southern Ecuador

Rainfall-induced landslides constitute a major cause of damage and fatalities throughout the intramontane basins of the Andes. The geological and climatic setting plays a key role in the generation of a high number of landslides in this area. For this reason, a greater understanding of the relationship between landslide frequency and climate conditions is necessary to mitigate human and economic losses. Accordingly, this paper presents an analysis of rainfall variables associated with a series of dated landslides (153 in total) in the southern Ecuador basin of Loja. This analysis was performed by applying an affordable empirical method that enables the calculation of critical rainfall threshold (CRT) curves. This calculation is based on an in-depth examination of rainfall parameters, such as cumulative precipitation and mean intensity, linked to a wide range of rainfall duration (from 1 to 90 days). The inspection of these parameters was addressed considering their frequency, which was calculated by using partial duration series (PDS), taking into account the entire rainfall record. This work has revealed that only 24% of landslides were triggered by rainfall conditions with maximum return periods greater than 1 year, whereas the rest did not exceed that return period. After finding the best correlation between the maximum return periods and the maximum mean intensity, a minimum power law function was adjusted to the CRT curve that correlates duration and cumulative rainfall. The values for this CRT function resulted in 5.14 and 0.83 for its scaling constant (α) and shape parameter (β), respectively. In addition, a spectral analysis was conducted to detect climatic cycles on the entire rainfall record. In general, a clear correlation could not be established between climatic frequencies and significant rainfall events inducing landslides, although similarly return periods were found for a critical rainfall event of March 2015 (10.4 years) and the SUNSPOT cycles (10.5-12 years). The results derived from this research are significantly valuable for the prevention of future mass-movements, although additional data will be crucial to update and calibrate CRT curves to study the influence of climate on landslide event frequency and magnitude in Loja.Departamento de Geología y Minas e Ingeniería Civil, Universidad Técnica Particular de Loja, EcuadorDepartamento de Geodinámica, Universidad de Granada, EspañaDepartamento de Ingeniería Civil, Universidad de Granada, EspañaUnidad de Granada, Instituto Geológico y Minero de España, Españ