19,800 research outputs found

    Gut microbiome-host interactions in health and disease

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    Holocene climatic variability indicated by a multi-proxy record from southern Africa's highest wetland

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    The eastern Lesotho Highlands experience climate patterns distinct from those of surrounding lower altitude regions, representing a niche environment with a unique biodiversity, leading to well-adapted but restricted vegetation. This study explores changes in the Holocene composition of diatoms and pollen at southern Africa’s highest altitude wetland (Mafadi: 3390 m a.s.l.). The palaeoenvironmental record for Mafadi Wetland indicates fluctuations between cold, wet conditions, prevalent between ~8140 and 7580 cal. yr BP and between ~5500 and 1100 cal. yr BP, and warmer, drier periods between ~7520 and 6680 cal. yr BP and between ~6160 and 5700 cal. yr BP. Marked climatic variability is noted from ~1100 cal. yr BP with colder conditions at ~150 kyr BP. Notably, the first of these cold periods occurs soon after the Northern Hemisphere 8.2 kyr event, while a second period of notably cold conditions occurs around 1100 cal. yr BP. Variability exists between the moisture reconstructions presented in this study and those from adjacent lower altitude sites, which is hypothesised to reflect variations in the strength and extent of the Westerlies throughout the Holocene

    A multi-proxy analysis of late Quaternary palaeoenvironments, Sekhokong Range, eastern Lesotho

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    The eastern Lesotho Highlands host an array of periglacial and glacial geomorphic features. Their analysis has provided past climate interpretations predominantly for cold periods, yet no multi-proxy temporally continuous palaeoenvironmental records exist. This study presents a palaeoenvironmental reconstruction based on sedimentary characteristics, fossil pollen and diatoms from an alpine wetland located in the Sekhokong Mountain Range. The record commences in the late Pleistocene with a wet period from ∼16 450 to 14 440 cal a BP, interrupted by dry conditions from ∼16 350 to 15 870 cal a BP. From ∼14 150 to 8560 cal a BP, drier conditions are inferred, slowly transitioning to warmer, wetter conditions. Warmer, dry conditions are inferred for ∼8560–7430 cal a BP, followed by cold, wet conditions from ∼7280 to 6560 cal a BP. A dry, warmer period occurs from ∼6560 to 3640 cal a BP indicated by pollen, diatom and sedimentary records, followed by cool, wet conditions from ∼3400 to 1200 cal a BP. The period from ∼1110 cal a BP to the present is characterized by progressive drying. Pronounced cold events are detected from the diatom record. Moisture records appear relatively specific to the topographic setting of Sekhokong near the Great Escarpment edge, probably driven by orographically constrained synoptic controls

    Ocean acidification and the loss of phenolic substances in marine plants.

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    Rising atmospheric CO(2) often triggers the production of plant phenolics, including many that serve as herbivore deterrents, digestion reducers, antimicrobials, or ultraviolet sunscreens. Such responses are predicted by popular models of plant defense, especially resource availability models which link carbon availability to phenolic biosynthesis. CO(2) availability is also increasing in the oceans, where anthropogenic emissions cause ocean acidification, decreasing seawater pH and shifting the carbonate system towards further CO(2) enrichment. Such conditions tend to increase seagrass productivity but may also increase rates of grazing on these marine plants. Here we show that high CO(2) / low pH conditions of OA decrease, rather than increase, concentrations of phenolic protective substances in seagrasses and eurysaline marine plants. We observed a loss of simple and polymeric phenolics in the seagrass Cymodocea nodosa near a volcanic CO(2) vent on the Island of Vulcano, Italy, where pH values decreased from 8.1 to 7.3 and pCO(2) concentrations increased ten-fold. We observed similar responses in two estuarine species, Ruppia maritima and Potamogeton perfoliatus, in in situ Free-Ocean-Carbon-Enrichment experiments conducted in tributaries of the Chesapeake Bay, USA. These responses are strikingly different than those exhibited by terrestrial plants. The loss of phenolic substances may explain the higher-than-usual rates of grazing observed near undersea CO(2) vents and suggests that ocean acidification may alter coastal carbon fluxes by affecting rates of decomposition, grazing, and disease. Our observations temper recent predictions that seagrasses would necessarily be "winners" in a high CO(2) world

    Determination of the strange nucleon form factors

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    The strange contribution to the electric and magnetic form factors of the nucleon is determined at a range of discrete values of Q2Q^2 up to 1.41.4 GeV2^2. This is done by combining recent lattice QCD results for the electromagnetic form factors of the octet baryons with experimental determinations of those quantities. The most precise result is a small negative value for the strange magnetic moment: GMs(Q2=0)=0.07±0.03μNG_M^s(Q^2=0) = -0.07\pm0.03\,\mu_N. At larger values of Q2Q^2 both the electric and magnetic form factors are consistent with zero to within 22-sigma

    Charge Symmetry Violation in the Electromagnetic Form Factors of the Proton

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    Experimental tests of QCD through its predictions for the strange-quark content of the proton have been drastically restricted by our lack of knowledge of the violation of charge symmetry (CSV). We find unexpectedly tiny CSV in the proton's electromagnetic form factors by performing the first extraction of these quantities based on an analysis of lattice QCD data. The resulting values are an order of magnitude smaller than current bounds on proton strangeness from parity violating electron-proton scattering experiments. This result paves the way for a new generation of experimental measurements of the proton's strange form factors to challenge the predictions of QCD

    Diffuse Gamma Rays: Galactic and Extragalactic Diffuse Emission

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    "Diffuse" gamma rays consist of several components: truly diffuse emission from the interstellar medium, the extragalactic background, whose origin is not firmly established yet, and the contribution from unresolved and faint Galactic point sources. One approach to unravel these components is to study the diffuse emission from the interstellar medium, which traces the interactions of high energy particles with interstellar gas and radiation fields. Because of its origin such emission is potentially able to reveal much about the sources and propagation of cosmic rays. The extragalactic background, if reliably determined, can be used in cosmological and blazar studies. Studying the derived "average" spectrum of faint Galactic sources may be able to give a clue to the nature of the emitting objects.Comment: 32 pages, 28 figures, kapproc.cls. Chapter to the book "Cosmic Gamma-Ray Sources," to be published by Kluwer ASSL Series, Edited by K. S. Cheng and G. E. Romero. More details can be found at http://www.gamma.mpe-garching.mpg.de/~aws/aws.htm

    Accuracy of BRCA1/2 mutation prediction models for different ethnicities and genders: Experience in a southern Chinese cohort

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    Background: BRCA1/2 mutation prediction models (BRCAPRO, Myriad II, Couch, Shattuck-Eidens, BOADICEA) are well established in western cohorts to estimate the probability of BRCA1/2 mutations. Results: are conflicting in Asian populations. Most studies did not account for gender-specific prediction. We evaluated the performance of these models in a Chinese cohort, including males, before BRCA1/2 mutation testing. Methods: The five risk models were used to calculate the probability of BRCA mutations in probands with breast and ovarian cancers; 267 were non-BRCA mutation carriers (247 females and 20 males) and 43 were BRCA mutation carriers (38 females and 5 males). Results: Mean BRCA prediction scores for all models were statistically better for carriers than noncarriers for females but not for males. BRCAPRO overestimated the numbers of female BRCA1/2 mutation carriers at thresholds ≥20% but underestimated if <20%. BRCAPRO and BOADICEA underestimated the number of male BRCA1/2 mutation carriers whilst Myriad II underestimated the number of both male and female carriers. In females, BRCAPRO showed similar discrimination, as measured by the area under the receiver operator characteristic curve (AUC) for BRCA1/2 combined mutation prediction to BOADICEA, but performed better than BOADICEA in BRCA1 mutation prediction (AUC 93% vs. 87%). BOADICEA had the best discrimination for BRCA1/2 combined mutation prediction (AUC 87%) in males. Conclusions: The variation in model performance underscores the need for research on larger Asian cohorts as prediction models, and the possible need for customizing these models for different ethnic groups and genders. © The Author(s) 2012.published_or_final_versio

    On the unification of dwarf and giant elliptical galaxies

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    The near orthogonal distributions of dwarf elliptical (dE) and giant elliptical (E) galaxies in the mu_e-Mag and mu_e-log(R_e) diagrams have been interpreted as evidence for two distinct galaxy formation processes. However, continuous, linear relationships across the alleged dE/E boundary at M_B = -18 mag - such as those between central surface brightness (mu_0) and (i) galaxy magnitude and (ii) light-profile shape (n) - suggest a similar, governing formation mechanism. Here we explain how these latter two linear trends necessitate a different behavior for dE and E galaxies, exactly as observed, in diagrams involving mu_e (and also _e). A natural consequence is that the distribution of dEs and Es in Fundamental Plane type analyses that use the associated intensity I_e, or _e, are expected to appear different. Together with other linear trends across the alleged dE/E boundary, such as those between luminosity and color, metallicity, and velocity dispersion, it appears that the dEs form a continuous extension to the E galaxies. The presence of partially depleted cores in luminous (M_B < -20.5 mag) Es does however signify the action of a different physical process at the centers (< ~300 pc) of these galaxies.Comment: 5 pages from the proceedings of the 2004 conference "Penetrating bars through masks of cosmic dust: the Hubble tuning fork strikes a new note". Edited by D. L. Block, I. Puerari, K. C. Freeman, R. Groess, and E. K. Bloc

    PGC-1 family coactivators and cell fate: roles in cancer, neurodegeneration, cardiovascular disease and retrograde mitochondria-nucleus signalling.

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    Over the past two decades, a complex nuclear transcriptional machinery controlling mitochondrial biogenesis and function has been described. Central to this network are the PGC-1 family coactivators, characterised as master regulators of mitochondrial biogenesis. Recent literature has identified a broader role for PGC-1 coactivators in both cell death and cellular adaptation under conditions of stress, here reviewed in the context of the pathology associated with cancer, neurodegeneration and cardiovascular disease. Moreover, we propose that these studies also imply a novel conceptual framework on the general role of mitochondrial dysfunction in disease. It is now well established that the complex nuclear transcriptional control of mitochondrial biogenesis allows for adaptation of mitochondrial mass and function to environmental conditions. On the other hand, it has also been suggested that mitochondria alter their function according to prevailing cellular energetic requirements and thus function as sensors that generate signals to adjust fundamental cellular processes through a retrograde mitochondria-nucleus signalling pathway. Therefore, altered mitochondrial function can affect cell fate not only directly by modifying cellular energy levels or redox state, but also indirectly, by altering nuclear transcriptional patterns. The current literature on such retrograde signalling in both yeast and mammalian cells is thus reviewed, with an outlook on its potential contribution to disease through the regulation of PGC-1 family coactivators. We propose that further investigation of these pathways will lead to the identification of novel pharmacological targets and treatment strategies to combat disease
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