965 research outputs found
North Atlantic 2001 - Part 4 Cruise No. 50, Leg 4 16 July – 12 August 2001, Reykjavik – Hamburg
Art between Synthetic Biology and Biohacking:Searching for Media Adequacy in the Epistemological Turn
Insights from Multimodal Preclinical Imaging in Immunocompetent Nude Mice
Hydrogels based on gelatin have evolved as promising multifunctional
biomaterials. Gelatin is crosslinked with lysine diisocyanate ethyl ester
(LDI) and the molar ratio of gelatin and LDI in the starting material mixture
determines elastic properties of the resulting hydrogel. In order to
investigate the clinical potential of these biopolymers, hydrogels with
different ratios of gelatin and diisocyanate (3-fold (G10_LNCO3) and 8-fold
(G10_LNCO8) molar excess of isocyanate groups) were subcutaneously implanted
in mice (uni- or bilateral implantation). Degradation and biomaterial-tissue-
interaction were investigated in vivo (MRI, optical imaging, PET) and ex vivo
(autoradiography, histology, serum analysis). Multimodal imaging revealed that
the number of covalent net points correlates well with degradation time, which
allows for targeted modification of hydrogels based on properties of the
tissue to be replaced. Importantly, the degradation time was also dependent on
the number of implants per animal. Despite local mechanisms of tissue
remodeling no adverse tissue responses could be observed neither locally nor
systemically. Finally, this preclinical investigation in immunocompetent mice
clearly demonstrated a complete restoration of the original healthy tissue
The \u3cem\u3eChlamydomonas\u3c/em\u3e Genome Reveals the Evolution of Key Animal and Plant Functions
Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic flagella (cilia), which were inherited from the common ancestor of plants and animals, but lost in land plants. We sequenced the ∼120-megabase nuclear genome of Chlamydomonas and performed comparative phylogenomic analyses, identifying genes encoding uncharacterized proteins that are likely associated with the function and biogenesis of chloroplasts or eukaryotic flagella. Analyses of the Chlamydomonas genome advance our understanding of the ancestral eukaryotic cell, reveal previously unknown genes associated with photosynthetic and flagellar functions, and establish links between ciliopathy and the composition and function of flagella
Adaptive sparse sampling for quasiparticle interference imaging
Quasiparticle interference imaging (QPI) offers insight into the band structure of quantum materials from the Fourier transform of local density of states (LDOS) maps. Their acquisition with a scanning tunneling microscope is traditionally tedious due to the large number of required measurements that may take several days to complete. The recent demonstration of sparse sampling for QPI imaging showed how the effective measurement time could be fundamentally reduced by only sampling a small and random subset of the total LDOS. However, the amount of required sub-sampling to faithfully recover the QPI image remained a recurring question. Here we introduce an adaptive sparse sampling (ASS) approach in which we gradually accumulate sparsely sampled LDOS measurements until a desired quality level is achieved via compressive sensing recovery. The iteratively measured random subset of the LDOS can be interleaved with regular topographic images that are used for image registry and drift correction. These reference topographies also allow to resume interrupted measurements to further improve the QPI quality. Our ASS approach is a convenient extension to quasiparticle interference imaging that should remove further hesitation in the implementation of sparse sampling mapping schemes
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Screening Arrays of Laminin Peptides on Modified Cellulose for Promotion of Adhesion of Primary Endothelial and Neural Precursor Cells
Neural precursor cells (NPC) are primary cells intensively used in the context of research on adult neurogenesis and modeling of neuronal development in health and diseased states. Substrates that can facilitate NPC adhesion will be very useful for culturing these cells. Due to the presence of laminin in basal lamina as well as their involvement in differentiation, migration, and adhesion of many types of cells, surfaces modified with laminin-derived peptides are focused upon and compared with the widely used fibronectin-derived Arg-Gly-Asp (RGD) peptides. An array of 46 peptides is synthesized on cellulose paper (SPOT) to identify laminin-derived peptides that promote short-term adhesion of murine NPC and human primary endothelial cells. Various previously reported peptide sequences are re-evaluated in this work. Initial adhesion experiments show NPC preferred several laminin-derived peptides by up to 5-time higher cell numbers, compared to the well-known promiscuous integrin binding RGD peptide. Importantly, screening of cell adhesion has revealed a synergetic effect of filamentous matrix, peptide sequence, surface property, ligand density, and the dynamic process of NPC adhesion. © The Authors. Advanced Biology published by Wiley-VCH Gmb
Adaptive Sparse Sampling for Quasiparticle Interference Imaging
Quasiparticle interference imaging (QPI) offers insight into the band
structure of quantum materials from the Fourier transform of local density of
states (LDOS) maps. Their acquisition with a scanning tunneling microscope is
traditionally tedious due to the large number of required measurements that may
take several days to complete. The recent demonstration of sparse sampling for
QPI imaging showed how the effective measurement time could be fundamentally
reduced by only sampling a small and random subset of the total LDOS. However,
the amount of required sub-sampling to faithfully recover the QPI image
remained a recurring question. Here we introduce an adaptive sparse sampling
(ASS) approach in which we gradually accumulate sparsely sampled LDOS
measurements until a desired quality level is achieved via compressive sensing
recovery. The iteratively measured random subset of the LDOS can be interleaved
with regular topographic images that are used for image registry and drift
correction. These reference topographies also allow to resume interrupted
measurements to further improve the QPI quality. Our ASS approach is a
convenient extension to quasiparticle interference imaging that should remove
further hesitation in the implementation of sparse sampling mapping schemes.Comment: 10 pages, 5 figure
Disturbed brain energy metabolism in a rodent model of DYT-TOR1A dystonia
DYT-TOR1A (DYT1) dystonia, characterized by reduced penetrance and suspected environmental triggers, is explored using a “second hit” DYT-TOR1A rat model. We aim to investigate the biological mechanisms driving the conversion into a dystonic phenotype, focusing on the striatum's role in dystonia pathophysiology.
Sciatic nerve crush injury was induced in ∆ETorA rats, lacking spontaneous motor abnormalities, and wild-type (wt) rats. Twelve weeks post-injury, unbiased RNA-sequencing was performed on the striatum to identify differentially expressed genes (DEGs) and pathways. Fenofibrate, a PPARα agonist, was introduced to assess its effects on gene expression. 18F-FDG autoradiography explored metabolic alterations in brain networks.
Low transcriptomic variability existed between naïve wt and ∆ETorA rats (17 DEGs). Sciatic nerve injury significantly impacted ∆ETorA rats (1009 DEGs) compared to wt rats (216 DEGs). Pathway analyses revealed disruptions in energy metabolism, specifically in fatty acid β-oxidation and glucose metabolism. Fenofibrate induced gene expression changes in wt rats but failed in ∆ETorA rats. Fenofibrate increased dystonia-like movements in wt rats but reduced them in ∆ETorA rats. 18F-FDG autoradiography indicated modified glucose metabolism in motor and somatosensory cortices and striatum in both ∆ETorA and wt rats post-injury.
Our findings highlight perturbed energy metabolism pathways in DYT-TOR1A dystonia, emphasizing compromised PPARα agonist efficacy in the striatum. Furthermore, we identify impaired glucose metabolism in the brain network, suggesting a potential shift in energy substrate utilization in dystonic DYT-TOR1A rats. These results contribute to understanding the pathophysiology and potential therapeutic targets for DYT-TOR1A dystonia
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