An assessment of chemical contaminants in the marine sediments of southwest Puerto Rico

This report summarizes the results of a characterization of chemical contaminants in the sediments in southwest Puerto Rico. The report is part of a project to integrate various analytical specialties to assess linkages between chemical contaminants and the condition of coral reefs. In this phase of the project, over 120 chemical contaminants were analyzed in sediments collected, including a number of organic (e.g., hydrocarbons), inorganic (e.g., metals), and biological (bacterial) compounds/analytes. The report also provides a preliminary analysis of the association between sediment contaminants and coral species richness. Overall, the levels of chemical contaminants in the study area between Guanica Bay and the town of La Parguera were fairly low. At most of the sites sampled, particularly adjacent to the town of La Parguera, concentrations of organic and inorganic contaminants were below the median values from NOAA’s National Status and Trends Program, which monitors the Nation’s coastal and estuarine waters for chemical contaminants. Elevated levels of a number of contaminant classes were seen at the two sites sampled within Guanica Bay. An initial analysis of modeled PAH (hydrocarbon) data and coral species richness (reef building species) indicated a strong negative correlation between the presence of PAHs in the sediments and coral species richness. Additional work is needed to assess possible reasons for this observed pattern. (PDF contains 126 pages)

Comparative analysis and fusion of spatiotemporal information for footstep recognition

Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works. R. Vera-Rodriguez, J. S. D. Mason, J. Fierrez, and J. Ortega-Garcia, "Comparative analysis and fusion of spatiotemporal information for footstep recognition", Pattern Analysis and Machine Intelligence, IEEE Transaction, vol. 35, no. 4, pp. 823-834, August 2012Footstep recognition is a relatively new biometric which aims to discriminate people using walking characteristics extracted from floor-based sensors. This paper reports for the first time a comparative assessment of the spatiotemporal information contained in the footstep signals for person recognition. Experiments are carried out on the largest footstep database collected to date, with almost 20,000 valid footstep signals and more than 120 people. Results show very similar performance for both spatial and temporal approaches (5 to 15 percent EER depending on the experimental setup), and a significant improvement is achieved for their fusion (2.5 to 10 percent EER). The assessment protocol is focused on the influence of the quantity of data used in the reference models, which serves to simulate conditions of different potential applications such as smart homes or security access scenarios.Ruben Vera-Rodriguez, Julian Fierrez and Javier Ortega Garcia are supported by projects Contexts (S2009/TIC-1485), Bio-Challenge (TEC2009-11186), TeraSense (CSD2008-00068) and ‘Catedra UAM-Telefonica’

A novel approach of gait recognition through fusion with footstep information

Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works. R. Vera-Rodríguez, J. Fiérrez, J. S.D. Mason, J. Ortega-García, "A novel approach of gait recognition through fusion with footstep information" in International Conference on Biometrics (ICB), Madrid (Spain), 2013, 1-6This paper is focused on two biometric modes which are very linked together: gait and footstep biometrics. Footstep recognition is a relatively new biometric based on signals extracted from floor sensors, while gait has been more researched and it is based on video sequences of people walking. This paper reports a directly comparative assessment of both biometrics using the same database (SFootBD) and experimental protocols. A fusion of the two modes leads to an enhanced gait recognition performance, as the information from both modes comes from different capturing devices and is not very correlated. This fusion could find application in indoor scenarios where a gait recognition system is present, such as in security access (e.g. security gate at airports) or smart homes. Gait and footstep systems achieve results of 8.4% and 10.7% EER respectively, which can be significantly improved to 4.8% EER with their fusion at the score level into a walking biometric.This work has been partially supported by projects Bio-Shield (TEC2012-34881), Contexts (S2009/TIC-1485), TeraSense (CSD2008-00068) and “Cátedra UAM-Telefónica”

Analysis of time domain information for footstep recognition

The final publication is available at Springer via http://dx.doi.org/10.1007/978-3-642-17289-2_47Proceedings of 6th International Symposium, ISVC 2010, Las Vegas, NV, (USA)This paper reports an experimental analysis of footsteps as a biometric. The focus here is on information extracted from the time domain of signals collected from an array of piezoelectric sensors. Results are related to the largest footstep database collected to date, with almost 20,000 valid footstep signals and more than 120 persons, which is well beyond previous related databases. Three feature approaches have been extracted, the popular ground reaction force (GRF), the spatial average and the upper and lower contours of the pressure signals. Experimental work is based on a verification mode with a holistic approach based on PCA and SVM, achieving results in the range of 5 to 15% EER depending on the experimental conditions of quantity of data used in the reference models.R.V.-R., J.F. and J.O.-G. are supported by projects Contexts (S2009/TIC-1485), Bio-Challenge (TEC2009-11186), TeraSense (CSD2008-00068) and "Cátedra UAM-Telefónica"

Chemical contamination in southwest Puerto Rico: a survey of contaminants in the coral Porites astreoides

Coral ( Porites astreoides ) from eight sites in southwest Puerto Rico were analyzed for approximately 150 chemical contaminants, to provide a preliminary characterization of environmental contamination in the corals, and assess the relationships between chemical contamination in corals and adjacent sediments. Overall, the concentration of PAHs (polycyclic aromatic hydrocarbons) and PCBs (polychlorinated biphenyls) detected in the limited number of coral samples collected were comparable to concentrations found in sediments. However, the concentration of a chemical contaminant (e.g., PAHs) in the corals at a site was often different from what was found in adjacent sediments. The level of PCBs and DDT (dichlorodiphenyltrichloroethane) in the corals appeared higher just outside of Guanica Bay, and there was some evidence of a downstream concentration gradient for these two contaminant classes. The trace elements copper and zinc were frequently detected in Porites astreoides , and the concentrations were usually comparable to those found in adjacent sediments. Chromium was an exception in that it was not detected in any of the coral samples analyzed, although it was detected in all of the sediment samples

A numerical study of multi-soliton configurations in a doped antiferromagnetic Mott insulator

We evaluate from first principles the self-consistent Hartree-Fock energies for multi-soliton configurations in a doped, spin-1/2, antiferromagnetic Mott insulator on a two-dimensional square lattice. We find that nearest-neighbor Coulomb repulsion stabilizes a regime of charged meron-antimeron vortex soliton pairs over a region of doping from 0.05 to 0.4 holes per site for intermediate coupling 3 < U/t <8. This stabilization is mediated through the generation of ``spin-flux'' in the mean-field antiferromagnetic (AFM) background. Holes cloaked by a meron-vortex in the spin-flux AFM background are charged bosons. Our static Hartree-Fock calculations provide an upper bound on the energy of a finite density of charged vortices. This upper bound is lower than the energy of the corresponding charged stripe configurations. A finite density of charge carrying vortices is shown to produce a large number of unoccupied electronic levels in the Mott-Hubbard charge transfer gap. These levels lead to significant band tailing and a broad mid-infrared band in the optical absorption spectrum as observed experimentally. At very low doping (below 0.05) the doping charges create extremely tightly bound meron-antimeron pairs or even isolated conventional spin-polarons, whereas for very high doping (above 0.4) the spin background itself becomes unstable to formation of a conventional Fermi liquid and the spin-flux mean-field is energetically unfavorable. Our results point to the predominance of a quantum liquid of charged, bosonic, vortex solitons at intermediate coupling and intermediate doping concentrations.Comment: 12 pages, 25 figures; added references, modified/eliminated some figure

The Biomolecule Sequencer Project: Nanopore Sequencing as a Dual-Use Tool for Crew Health and Astrobiology Investigations

Human missions to Mars will fundamentally transform how the planet is explored, enabling new scientific discoveries through more sophisticated sample acquisition and processing than can currently be implemented in robotic exploration. The presence of humans also poses new challenges, including ensuring astronaut safety and health and monitoring contamination. Because the capability to transfer materials to Earth will be extremely limited, there is a strong need for in situ diagnostic capabilities. Nucleotide sequencing is a particularly powerful tool because it can be used to: (1) mitigate microbial risks to crew by allowing identification of microbes in water, in air, and on surfaces; (2) identify optimal treatment strategies for infections that arise in crew members; and (3) track how crew members, microbes, and mission-relevant organisms (e.g., farmed plants) respond to conditions on Mars through transcriptomic and genomic changes. Sequencing would also offer benefits for science investigations occurring on the surface of Mars by permitting identification of Earth-derived contamination in samples. If Mars contains indigenous life, and that life is based on nucleic acids or other closely related molecules, sequencing would serve as a critical tool for the characterization of those molecules. Therefore, spaceflight-compatible nucleic acid sequencing would be an important capability for both crew health and astrobiology exploration. Advances in sequencing technology on Earth have been driven largely by needs for higher throughput and read accuracy. Although some reduction in size has been achieved, nearly all commercially available sequencers are not compatible with spaceflight due to size, power, and operational requirements. Exceptions are nanopore-based sequencers that measure changes in current caused by DNA passing through pores; these devices are inherently much smaller and require significantly less power than sequencers using other detection methods. Consequently, nanopore-based sequencers could be made flight-ready with only minimal modifications

Chemical contaminants in the coral Porites astreoides from southwest Puerto Rico

This report presents an initial characterization of chemical contamination in coral tissues (Porites astreoides) from southwest Puerto Rico. It is the second technical report from a project to characterize chemical contaminants and assess linkages between contamination and coral condition. The first report quantified chemical contaminants in sediments from southwest Puerto Rico. This document summarizes the analysis of nearly 150 chemical contaminants in coral tissues. Although only eight coral samples were collected, some observations can be made on the correlations between observed tissue and sediment contaminant concentrations. The concentrations of polycyclic aromatic hydrocarbons (PAHs), typically associated with petroleum spills and the combustion of fossil fuels, and polychlorinated biphenyls (PCBs) in the coral tissues were comparable to concentrations found in adjacent sediments. However, the concentration of a chemical contaminant (e.g., PAHs) in the coral tissues at a particular site was not a good predictor of what was in the adjacent sediments. In addition, the types of PAHs found in the coral tissues were somewhat different (higher ratios of alkylated PAHs) than in sediments. The levels of PCBs and DDT in coral tissues appeared higher just outside of Guanica Bay, and there was evidence of a downstream concentration gradient for these two contaminant classes. The trace elements copper, zinc and nickel were frequently detected in coral tissues, and the concentration in the corals was usually comparable to that found in adjacent sediments. Chromium was an exception in that it was not detected in any of the coral tissues analyzed. Additional work is needed to assess how spatial patterns in chemical contamination affect coral condition, abundance and distribution

The value of nonlinear control theory in investigating the underlying dynamics and resilience of a grocery supply chain

In an empirical context, a method to use nonlinear control theory in the dynamic analysis of supply chain resilience is developed and tested. The method utilises block diagram development, transfer function formulation, describing function representation of nonlinearities and simulation. Using both ‘shock’ or step response and ‘filter’ or frequency response lenses, a system dynamics model is created to analyse the resilience performance of a distribution centre replenishment system at a large grocery retailer. Potential risks for the retailer’s resilience performance include the possibility of a mismatch between supply and demand, as well as serving the store inefficiently and causing on-shelf stock-outs. Thus, resilience is determined by investigating the dynamic behaviour of stock and shipment responses. The method allows insights into the nonlinear system control structures that would not be evident using simulation alone, including a better understanding of the influence of control parameters on dynamic behaviour, the identification of inventory offsets potentially leading to ‘drift’, the impact of nonlinearities on supply chain performance and the minimisation of simulation experiments

Observational Limit on Gravitational Waves from Binary Neutron Stars in the Galaxy

Using optimal matched filtering, we search 25 hours of data from the LIGO 40-meter prototype laser interferometric gravitational-wave detector for gravitational-wave chirps emitted by coalescing binary systems within our Galaxy. This is the first test of this filtering technique on real interferometric data. An upper limit on the rate R of neutron star binary inspirals in our Galaxy is obtained: with 90% confidence, R< 0.5/hour. Similar experiments with LIGO interferometers will provide constraints on the population of tight binary neutron star systems in the Universe.Comment: RevTeX, minor revisions, exactly as published in PRL 83 (1999) p1498, 4 pages, 2 figures include