21 research outputs found
Global motion processing by populations of direction-selective retinal ganglion cells
AbstractSimple stimuli have been critical to understanding neural population codes in sensory systems. Yet it remains necessary to determine the extent to which this understanding generalizes to more complex conditions. To explore this problem, we measured how populations of direction-selective ganglion cells (DSGCs) from mouse retina respond to a global motion stimulus with its direction and speed changing dynamically. We then examined the encoding and decoding of motion direction in both individual and populations of DSGCs. Individual cells integrated global motion over ~200 ms, and responses were tuned to direction. However, responses were sparse and broadly tuned, which severely limited decoding performance from small DSGC populations. In contrast, larger populations compensated for response sparsity, enabling decoding with high temporal precision (<100 ms). At these timescales, correlated spiking was minimal and had little impact on decoding performance, unlike results obtained using simpler local motion stimuli decoded over longer timescales. We use these data to define different DSGC population decoding regimes that utilize or mitigate correlated spiking to achieve high spatial versus high temporal resolution.</jats:p
Global Motion Processing by Populations of Direction-Selective Retinal Ganglion Cells.
Simple stimuli have been critical to understanding neural population codes in sensory systems. Yet it remains necessary to determine the extent to which this understanding generalizes to more complex conditions. To examine this problem, we measured how populations of direction-selective ganglion cells (DSGCs) from the retinas of male and female mice respond to a global motion stimulus with its direction and speed changing dynamically. We then examined the encoding and decoding of motion direction in both individual and populations of DSGCs. Individual cells integrated global motion over ∼200 ms, and responses were tuned to direction. However, responses were sparse and broadly tuned, which severely limited decoding performance from small DSGC populations. In contrast, larger populations compensated for response sparsity, enabling decoding with high temporal precision (SIGNIFICANCE STATEMENT ON-OFF direction-selective ganglion cells (ooDSGCs) in the mammalian retina are typically thought to signal local motion to the brain. However, several recent studies suggest they may signal global motion. Here we analyze the fidelity of encoding and decoding global motion in a natural scene across large populations of ooDSGCs. We show that large populations of DSGCs are capable of signaling rapid changes in global motion
Generative adversarial neural networks maintain decoder accuracy during signal disruption in simulated long-term recordings from brain computer interfaces
AbstractChronically implanted brain-computer interfaces (BCIs) provide amazing opportunities to those living with disability and for the treatment of chronic disorders of the nervous system. However, this potential has yet to be fully realized in part due to the lack of stability in measured signals over time. Signal disruption stems from multiple sources including mechanical failure of the interface, changes in neuron health, and glial encapsulation of the electrodes that alter the impedance. In this study we present an algorithmic solution to the problem of long-term signal disruption in chronically implanted neural interfaces. Our approach utilizes a generative adversarial network (GAN), based on the original Unsupervised Image to Image Translation (UNIT) algorithm, which learns how to recover degraded signals back to their analogous non-disrupted (“clean”) exemplars measured at the time of implant. We demonstrate that this approach can reliably recover simulated signals in two types of commonly used neural interfaces: multi-electrode arrays (MEA), and electrocorticography (ECoG). To test the accuracy of signal recovery we employ a common BCI paradigm wherein a classification algorithm (neural decoder) is trained on the starting (non-disrupted) set of signals. Performance of the decoder demonstrates expected failure over time as the signal disruption accumulates. In simulated MEA experiments, our approach recovers decoder accuracy to >90% when as many as 13/ 32 channels are lost, or as many as 28/32 channels have their neural responses altered. In simulated ECoG experiments, our approach shows stabilization of the neural decoder indefinitely with decoder accuracies >95% over simulated lifetimes of over 1 year. Our results suggest that these types of neural networks can provide a useful tool to improve the long-term utility of chronically implanted neural interfaces.</jats:p
The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.
Infectious and inflammatory diseases have repeatedly shown strong genetic associations within the major histocompatibility complex (MHC); however, the basis for these associations remains elusive. To define host genetic effects on the outcome of a chronic viral infection, we performed genome-wide association analysis in a multiethnic cohort of HIV-1 controllers and progressors, and we analyzed the effects of individual amino acids within the classical human leukocyte antigen (HLA) proteins. We identified >300 genome-wide significant single-nucleotide polymorphisms (SNPs) within the MHC and none elsewhere. Specific amino acids in the HLA-B peptide binding groove, as well as an independent HLA-C effect, explain the SNP associations and reconcile both protective and risk HLA alleles. These results implicate the nature of the HLA-viral peptide interaction as the major factor modulating durable control of HIV infection
