Towards precision distances and 3D dust maps using broadband Period--Magnitude relations of RR Lyrae stars

We determine the period-magnitude relations of RR Lyrae stars in 13 photometric bandpasses from 0.4 to 12 {\mu}m using timeseries observations of 134 stars. The Bayesian formalism, extended from our previous work to include the effects of line-of-sight dust extinction, allows for the simultaneous inference of the posterior distribution of the mean absolute magnitude, slope of the period-magnitude power-law, and intrinsic scatter about a perfect power-law for each bandpass. In addition, the distance modulus and line-of-sight dust extinction to each RR Lyrae star in the calibration sample is determined, yielding a sample median fractional distance error of 0.66%. The intrinsic scatter in all bands appears to be larger than the photometric errors, except in WISE W1 (3.4 {\mu}m) and W2 (4.6 {\mu}m) where the photometric error ($\sigma \approx 0.05$ mag) is to be comparable or larger than the intrinsic scatter. Additional observations at these wavelengths could improve the inferred distances to these sources further. As an application of the methodology, we infer the distance to the RRc-type star RZCep at low Galactic latitude ($b = 5.5^\circ$) to be $\mu=8.0397\pm0.0123$ mag ($405.4\pm2.3$ pc) with colour excess $E(B-V)=0.2461\pm0.0089$ mag. This distance, equivalent to a parallax of $2467\pm14$ microarcsec, is consistent with the published HST parallax measurement but with an uncertainty that is 13 times smaller than the HST measurement. If our measurements (and methodology) hold up to scrutiny, the distances to these stars have been determined to an accuracy comparable to those expected with Gaia. As RR Lyrae are one of the primary components of the cosmic distance ladder, the achievement of sub-1% distance errors within a formalism that accounts for dust extinction may be considered a strong buttressing of the path to eventual 1% uncertainties in Hubble's constant.Comment: 21 pages, 29 figures, 2 tables, abstract abridged for arXiv. Comments solicited on referee report (received June 9, 2014) linked: https://gist.github.com/profjsb/c6c4e2f3a20ea02f1762 . Public archive of code used to generate results and figures: https://github.com/ckleinastro/period_luminosity_relation_fittin

The Genetic Basis of Mutation Rate Variation in Yeast.

Mutations are the root source of genetic variation and underlie the process of evolution. Although the rates at which mutations occur vary considerably between species, little is known about differences within species, or the genetic and molecular basis of these differences. Here, we leveraged the power of the yeast Saccharomyces cerevisiae as a model system to uncover natural genetic variants that underlie variation in mutation rate. We developed a high-throughput fluctuation assay and used it to quantify mutation rates in seven natural yeast isolates and in 1040 segregant progeny from a cross between BY, a laboratory strain, and RM, a wine strain. We observed that mutation rate varies among yeast strains and is heritable (H 2 = 0.49). We performed linkage mapping in the segregants and identified four quantitative trait loci underlying mutation rate variation in the cross. We fine-mapped two quantitative trait loci to the underlying causal genes, RAD5 and MKT1, that contribute to mutation rate variation. These genes also underlie sensitivity to the DNA-damaging agents 4NQO and MMS, suggesting a connection between spontaneous mutation rate and mutagen sensitivity

Present and Future Prospects for GRB Standard Candles

Following our previous work, we conclude that a GRB standard candle constructed from the Ghirlanda et al. power-law relation between the geometry-corrected energy (E_gamma) and the peak of the rest-frame prompt burst spectrum (E_p) is not yet cosmographically useful, despite holding some potential advantages over SNe Ia. This is due largely to the small sample of \~20 GRBs with the required measured redshifts, jet-breaks, and peak energies, and to the strong sensitivity of the goodness-of-fit of the power-law to input assumptions. The most important such finding concerns the sensitivity to the generally unknown density (and density profile), of the circumburst medium. Although the E_p-E_gamma relation is a highly significant correlation over many cosmologies, until the sample expands to include many low-z events, it will be most sensitive to Omega_M but essentially insensitive to Omega_Lambda and w, with some hope of constraining dw/dt with high-z GRB data alone. The relation clearly represents a significant improvement in the search for an empirical GRB standard candle, but is further hindered by an unknown physical basis for the relation, the lack of a low-z training set to calibrate the relation in a cosmology-independent way, and several major potential systematic uncertainties and selection effects. Until these concerns are addressed, a larger sample is acquired, and attempts are made to marginalize or perform Monte Carlo simulations over the unknown density distribution, we urge caution concerning claims of the utility of GRBs for cosmography and especially the attempts to combine GRBs with SNe Ia.Comment: 5 pages, 2 figures, "Proceedings, Gamma-Ray Bursts in the Afterglow Era: 4th Workshop, Rome, Italy, Oct 18-22, 2004". Accepted to Il Nuovo Cimento. For more details, see astro-ph/0408413 (ApJ accepted), and other work from the cosmicbooms.net Team at http://www.cosmicbooms.net

The Corrected Log N-Log Fluence Distribution of Cosmological Gamma-Ray Bursts

Recent analysis of relativistically expanding shells of cosmological gamma-ray bursts has shown that if the bursts are cosmological, then most likely total energy (E_0) is standard and not peak luminosity (L_0). Assuming a flat Friedmann cosmology (q_o = 1/2, Lambda = 0) and constant rate density (rho_0) of bursting sources, we fit a standard candle energy to a uniformly selected log N-log S in the BATSE 3B catalog correcting for fluence efficiency and averaging over 48 observed spectral shapes. We find the data consistent with E_0 = 7.3^{+0.7}_{-1.0} X 10^{51} ergs and discuss implications of this energy for cosmological models of gamma-ray bursts.Comment: A five page LateX file that uses the Revtex conference proceedings macro aipbook.sty, and includes three postscript figures using psfig. To Be published in the Proceedings of the Third Hunstville Symposium on Gamma-Ray Bursts, eds. C. Kouveliotou, M.S. Briggs and G.J. Fishman (New York:AIP). Postscript version availible at http://nis-www.lanl.gov/~jsbloom/LOG_S.p

A recurrent neural network for classification of unevenly sampled variable stars

Astronomical surveys of celestial sources produce streams of noisy time series measuring flux versus time ("light curves"). Unlike in many other physical domains, however, large (and source-specific) temporal gaps in data arise naturally due to intranight cadence choices as well as diurnal and seasonal constraints. With nightly observations of millions of variable stars and transients from upcoming surveys, efficient and accurate discovery and classification techniques on noisy, irregularly sampled data must be employed with minimal human-in-the-loop involvement. Machine learning for inference tasks on such data traditionally requires the laborious hand-coding of domain-specific numerical summaries of raw data ("features"). Here we present a novel unsupervised autoencoding recurrent neural network (RNN) that makes explicit use of sampling times and known heteroskedastic noise properties. When trained on optical variable star catalogs, this network produces supervised classification models that rival other best-in-class approaches. We find that autoencoded features learned on one time-domain survey perform nearly as well when applied to another survey. These networks can continue to learn from new unlabeled observations and may be used in other unsupervised tasks such as forecasting and anomaly detection.Comment: 23 pages, 14 figures. The published version is at Nature Astronomy (https://www.nature.com/articles/s41550-017-0321-z). Source code for models, experiments, and figures at https://github.com/bnaul/IrregularTimeSeriesAutoencoderPaper (Zenodo Code DOI: 10.5281/zenodo.1045560

Book Review: Meeting of Minds: Intellectual and Religious Interaction in East Asian Traditions of Thought

Meeting of Minds: Intellectual and Religious Interaction in East Asian Traditions of Thought, a volume of eleven essays written in honor of Wing-tsit Chan and William Theodore de Bary, proposes to explore how Confucian and Neo-Confucian traditions have responded to and have influenced other traditions (Buddhist, Taoist, folk, Japanese nativist, and so on) in China and Japan. The essays are arranged first geographically (seven articles on China precede four on Japan) and then roughly chronologically. All essays, save one, describe Sung or post-Sung developments. A few sentences per essay must suffice in this review. [excerpt

A New Low-Mass Eclipsing Binary from SDSS-II

We present observations of a new low-mass double-lined eclipsing binary system discovered using repeat observations of the celestial equator from the Sloan Digital Sky Survey II. Using near-infrared photometry and optical spectroscopy we have measured the properties of this short-period [P=0.407037(14) d] system and its two components. We find the following parameters for the two components: M_1=0.272+/-0.020 M_sun, R_1=0.268+/-0.010 R_sun, M_2=0.240+/-0.022 M_sun, R_2=0.248+/-0.0090 R_sun, T_1=3320+/-130 K, T_2=3300+/-130 K. The masses and radii of the two components of this system agree well with theoretical expectations based on models of low-mass stars, within the admittedly large errors. Future synoptic surveys like Pan-STARRS and LSST will produce a wealth of information about low-mass eclipsing systems and should make it possible, with an increased reliance on follow-up observations, to detect many systems with low-mass and sub-stellar companions. With the large numbers of objects for which these surveys will produce high-quality photometry, we suggest that it becomes possible to identify such systems even with sparse time sampling and a relatively small number of individual observations.Comment: 15 Pages, 9 Figures, 6 Tables. Replaced with version accepted to Ap

The prompt energy release of gamma-ray bursts using a cosmological k-correction

The fluences of gamma-ray bursts (GRBs) are measured with a variety of instruments in different detector energy ranges. A detailed comparison of the implied energy releases of the GRB sample requires, then, an accurate accounting of this diversity in fluence measurements which properly corrects for the redshifting of GRB spectra. Here, we develop a methodology to ``k-correct'' the implied prompt energy release of a GRB to a fixed co-moving bandpass. This allows us to homogenize the prompt energy release of 17 cosmological GRBs (using published redshifts, fluences, and spectra) to two common co-moving bandpasses: 20-2000 keV and 0.1 keV-10 MeV (``bolometric''). While the overall distribution of GRB energy releases does not change significantly by using a k-correction, we show that uncorrected energy estimates systematically undercounts the bolometric energy by ~5% to 600%, depending on the particular GRB. We find that the median bolometric isotropic-equivalent prompt energy release is 2.2 x 10^{53} erg with an r.m.s. scatter of 0.80 dex. The typical estimated uncertainty on a given k-corrected energy measurement is ~20%.Comment: Accepted to the Astronomical Journal. 21 pages (LaTeX) and 4 figure