Environmental variables controlling soil respiration on diurnal, seasonal and annual time-scales in a mixed mountain forest in Switzerland

Studies on soil respiration in mountain forests are rather scarce compared to their broad distribution. Therefore, we investigated daily, seasonal and annual soil respiration rates in a mixed forest (Lägeren), located at about 700m in the Swiss Jura mountains, during 2years (2006 and 2007). Soil respiration (SR) was measured continuously with high temporal resolution (half-hourly) at one single point (SRautomated) and periodically with high spatial resolution (SRmanual) at 16 plots within the study site. Both, SRautomated and SRmanual showed a similar seasonal cycle. SR strongly depended on soil temperature in 2007 (R 2=0.82-0.92), but less so in 2006 (R 2=0.56-0.76) when SR was water limited during a summer drought. Including soil moisture improved the fit of the 2006 model significantly (R 2=0.78-0.97). Total annual SR for the study site was estimated as 869g C m−2year−1 for 2006 and as 907g C m−2year−1 for 2007 (uncertainty <10% at the 95% confidence interval, determined by bootstrapping). Selected environmental conditions were assessed in more detail: (1) Rapid, but contrasting changes of SR were found after summer rainfall. Depending on soil moisture at pre-rain conditions, summer rain could either cause a pulse of CO2 from the soil or an abrupt decrease of SRautomated due to water logging of soil pores. (2) Two contrasting winter seasons resulted in SR being about 60-70% (31.2-44.6g C m−2) higher during a mild winter (2007) compared to a harsh winter (2006). (3) Analysing SR for selected periods on a diurnal scale revealed a counter-clockwise hysteresis with soil surface temperatures. This indication of a time-lagged response of SR to temperature was further supported by a very strong relationship (R 2=0.86-0.90) of SR to soil temperature with a time-lag of 2-4

Representative estimates of soil and ecosystem respiration in an old beech forest

Respiration has been proposed to be the main determinant of the carbon balance in European forests and is thus essential for our understanding of the carbon cycle. However, the choice of experimental design strongly affects estimates of annual respiration and of the contribution of soil respiration to total ecosystem respiration. In a detailed study of ecosystem and soil respiration fluxes in an old unmanaged deciduous forest in Central Germany over 3years (2000-2002), we combined soil chamber and eddy covariance measurements to obtain a comprehensive picture of respiration in this forest. The closed portable chambers offered to investigate spatial variability of soil respiration and its controls while the eddy covariance system offered continuous measurements of ecosystem respiration. Over the year, both fluxes were mainly correlated with temperature. However, when soil moisture sank below 23vol.% in the upper 6cm, water limitations also became apparent. The temporal resolution of the eddy covariance system revealed that relatively high respiration rates occurred during budbreak due to increased metabolic activity and after leaf fall because of increased decomposition. Spatial variability in soil respiration rates was large and correlated with fine root biomass (r 2 = 0.56) resulting in estimates of annual efflux varying across plots from 730 to 1,258 (mean 898) g C m−2 year−1. Power function calculations showed that achieving a precision in the soil respiration estimate of 20% of the full population mean at a confidence level of 95%, requires about eight sampling locations. Our results can be used as guidelines to improve the representativeness of soil respiration measurements by nested sampling designs, being applied in long-term and large-scale carbon sequestration projects such as FLUXNET and CarboEurop

Soil H218O labelling reveals the effect of drought on C18OO fluxes to the atmosphere

Concurrent and continuous measurements of the 18O/16O ratio in CO2 and H2Ov after a H2 18O labelling showed that drought reduces the 18O-equilibrium between CO2 and H2O at the shoot leve

A specific PFT and sub-canopy structure for simulating oil palm in the community land model (CLM-Palm)

Towards an effort to quantify the effects of rainforests to oil palm conversion on land-atmosphere carbon, water and energy fluxes, a specific plant functional type (PFT) and sub-canopy structure are developed for simulating oil palm within the Community Land Model (CLM4.5). Current global land surface models only simulate annual crops beside natural vegetation. In this study, a multilayer oil palm subroutine is developed in CLM4.5 for simulating oil palm's phenology and carbon and nitrogen allocation. The oil palm has monopodial morphology and sequential phenology of around 40 stacked phytomers, each carrying a large leaf and a fruit bunch, forming a natural multilayer canopy. A sub-canopy phenological and physiological parameterization is thus introduced, so that multiple phytomer components develop simultaneously but according to their different phenological steps (growth, yield and senescence) at different canopy layers. This specific multilayer structure was proved useful for simulating canopy development in terms of leaf area index (LAI) and fruit yield in terms of carbon and nitrogen outputs in Jambi, Sumatra (Fan et al. 2015).The study supports that species-specific traits, such as palm's monopodial morphology and sequential phenology, are necessary representations in terrestrial biosphere models in order to accurately simulate vegetation dynamics and feedbacks to climate. Further, oil palm's multilayer structure allows adding all canopy-level calculations of radiation, photosynthesis, stomatal conductance and respiration, beside phenology, also to the sub-canopy level, so as to eliminate scale mismatch problem among different processes. A series of adaptations are made to the CLM model. Initial results show that the adapted multilayer radiative transfer scheme and the explicit represention of oil palm's canopy structure improve on simulating photosynthesis-light response curve. The explicit photosynthesis and dynamic leaf nitrogen calculations per canopy layer also enhance simulated CO2 flux when compared to eddy covariance flux data. More investigations on energy and water fluxes and nitrogen balance are being conducted. These new schemes would hopefully promote the understanding of climatic effects of the tropical land use transformation system

Expansion of oil palm and other cash crops causes an increase of the land surface temperature in the Jambi province in Indonesia

Indonesia is currently one of the regions with the highest transformation rate of land surface worldwide related to the expansion of oil palm plantations and other cash crops replacing forests on large scales. Land cover changes, which modify land surface properties, have a direct effect on the land surface temperature (LST), a key driver for many ecological functions. Despite the large historic land transformation in Indonesia toward oil palm and other cash crops and governmental plans for future expansion, this is the first study so far to quantify the impacts of land transformation on the LST in Indonesia. We analyze LST from the thermal band of a Landsat image and produce a high-resolution surface temperature map (30 m) for the lowlands of the Jambi province in Sumatra (Indonesia), a region which suffered large land transformation towards oil palm and other cash crops over the past decades. The comparison of LST, albedo, normalized differenced vegetation index (NDVI) and evapotranspiration (ET) between seven different land cover types (forest, urban areas, clear-cut land, young and mature oil palm plantations, acacia and rubber plantations) shows that forests have lower surface temperatures than the other land cover types, indicating a local warming effect after forest conversion. LST differences were up to 10.1 ± 2.6 °C (mean ± SD) between forest and clear-cut land. The differences in surface temperatures are explained by an evaporative cooling effect, which offsets the albedo warming effect. Our analysis of the LST trend of the past 16 years based on MODIS data shows that the average daytime surface temperature in the Jambi province increased by 1.05 °C, which followed the trend of observed land cover changes and exceeded the effects of climate warming. This study provides evidence that the expansion of oil palm plantations and other cash crops leads to changes in biophysical variables, warming the land surface and thus enhancing the increase of the air temperature because of climate change. (Résumé d'auteur

Carbon isotope discrimination during branch photosynthesis of Fagus sylvatica: field measurements using laser spectrometry

Photosynthetic carbon isotope discrimination of Fagus sylvatica was measured online and under field conditions using branch bags and laser spectrometers. A substantial variability was observed. Its potential drivers were investigate

Response of CO₂ and H₂O fluxes in a mountainous tropical rainforest in equatorial Indonesia to El Niño events

The possible impact of El Niño–Southern Oscillation (ENSO) events on the main components of CO₂ and H₂O fluxes between the tropical rainforest and the atmosphere is investigated. The fluxes were continuously measured in an old-growth mountainous tropical rainforest in Central Sulawesi in Indonesia using the eddy covariance method for the period from January 2004 to June 2008. During this period, two episodes of El Niño and one episode of La Niña were observed. All these ENSO episodes had moderate intensity and were of the central Pacific type. The temporal variability analysis of the main meteorological parameters and components of CO₂ and H₂O exchange showed a high sensitivity of evapotranspiration (ET) and gross primary production (GPP) of the tropical rainforest to meteorological variations caused by both El Niño and La Niña episodes. Incoming solar radiation is the main governing factor that is responsible for ET and GPP variability. Ecosystem respiration (RE) dynamics depend mainly on the air temperature changes and are almost insensitive to ENSO. Changes in precipitation due to moderate ENSO events did not have any notable effect on ET and GPP, mainly because of sufficient soil moisture conditions even in periods of an anomalous reduction in precipitation in the region

Carbon allocation and carbon isotope fluxes in the plant-soil-atmosphere continuum: a review

The terrestrial carbon (C) cycle has received increasing interest over the past few decades, however, there is still a lack of understanding of the fate of newly assimilated C allocated within plants and to the soil, stored within ecosystems and lost to the atmosphere. Stable carbon isotope studies can give novel insights into these issues. In this review we provide an overview of an emerging picture of plant-soil-atmosphere C fluxes, as based on C isotope studies, and identify processes determining related C isotope signatures. The first part of the review focuses on isotopic fractionation processes within plants during and after photosynthesis. The second major part elaborates on plant-internal and plant-rhizosphere C allocation patterns at different time scales (diel, seasonal, interannual), including the speed of C transfer and time lags in the coupling of assimilation and respiration, as well as the magnitude and controls of plant-soil C allocation and respiratory fluxes. Plant responses to changing environmental conditions, the functional relationship between the physiological and phenological status of plants and C transfer, and interactions between C, water and nutrient dynamics are discussed. The role of the C counterflow from the rhizosphere to the aboveground parts of the plants, e.g. via CO&lt;sub&gt;2&lt;/sub&gt; dissolved in the xylem water or as xylem-transported sugars, is highlighted. The third part is centered around belowground C turnover, focusing especially on above- and belowground litter inputs, soil organic matter formation and turnover, production and loss of dissolved organic C, soil respiration and CO&lt;sub&gt;2&lt;/sub&gt; fixation by soil microbes. Furthermore, plant controls on microbial communities and activity via exudates and litter production as well as microbial community effects on C mineralization are reviewed. A further part of the paper is dedicated to physical interactions between soil CO&lt;sub&gt;2&lt;/sub&gt; and the soil matrix, such as CO&lt;sub&gt;2&lt;/sub&gt; diffusion and dissolution processes within the soil profile. Finally, we highlight state-of-the-art stable isotope methodologies and their latest developments. From the presented evidence we conclude that there exists a tight coupling of physical, chemical and biological processes involved in C cycling and C isotope fluxes in the plant-soil-atmosphere system. Generally, research using information from C isotopes allows an integrated view of the different processes involved. However, complex interactions among the range of processes complicate or currently impede the interpretation of isotopic signals in CO&lt;sub&gt;2&lt;/sub&gt; or organic compounds at the plant and ecosystem level. This review tries to identify present knowledge gaps in correctly interpreting carbon stable isotope signals in the plant-soil-atmosphere system and how future research approaches could contribute to closing these gaps

Ecosystem functions of oil palm plantations - a review

Oil palm plantations have expanded rapidly in the last decades. This large-scale land-use change has had great impacts on both the areas converted to oil palm and their surroundings. Howev-er, research on the impacts of oil palm agriculture is scattered and patchy, and no clear overview ex-ists. Here, we address this gap through a systematic and comprehensive literature review of all ecosys-tem functions in oil palm plantations. We compare ecosystem functions in oil palm plantations to those in forests as forests are often cleared for the establishment of oil palm. We find that oil palm planta-tions generally have reduced ecosystem functioning compared to forests. Some of these functions are lost globally, such as those to gas and climate regulation and to habitat and nursery functions. The most serious impacts occur when land is cleared to establish new plantations, and immediately after-wards, especially on peat soils. To variable degrees, plantation management can prevent or reduce losses of some ecosystem functions. The only ecosystem function which increased in oil palm planta-tions is, unsurprisingly, the production of marketable goods. Our review highlights numerous research gaps. In particular, there are significant gaps with respect to information functions (socio-cultural functions). There is a need for empirical data on the importance of spatial and temporal scales, such as the differences between plantations in different environments, of different sizes, and of different ages. Finally, more research is needed on developing management practices that can off-set the losses of ecosystem functions

Strong radiative effect induced by clouds and smoke on forest net ecosystem productivity in central Siberia

Aerosols produced by wildfires are a common phenomenon in boreal regions. For the Siberian taiga, it is still an open question if the effects of aerosols on atmospheric conditions increase net CO2 uptake or photosynthesis. We investigated the factors controlling forest net ecosystem productivity (NEP) and explored how clouds and smoke modulate radiation as a major factor controlling NEP during fire events in the years 2012 and 2013. To characterize the underlying mechanisms of the NEP response to environmental drivers, Artificial Neural Networks (ANNs) were trained by eddy covariance flux measurements nearby the Zotino Tall Tower Observatory (ZOTTO). Total photosynthetically active radiation, vapour pressure deficit, and diffuse fraction explain at about 54-58% of NEP variability. NEP shows a strong negative sensitivity to VPD, and a small positive to f(dlf). A strong diffuse radiation fertilization effect does not exist at ZOTTO forest due to the combined effects of low light intensity, sparse canopy and low leaf area index. Results suggests that light intensity and canopy structure are important factors of the overall diffuse radiation fertilization effect.Peer reviewe