Photosynthesis dependent acidification of perialgal vacuoles in theParamedum bursaria/Chlorella symbiosis. Visualization by monensin

After treatment with the carboxylic ionophore monensin theChlorella containing perialgal vacuoles of the greenParamecium bursaria swell. TheParamecium cells remain motile at this concentration for at least one day. The swelling is only observed in illuminated cells and can be inhibited by DCMU. We assume that during photosynthesis the perialgal vacuoles are acidified and that monensin exchanges H+ ions against monovalent cations (here K+). In consequence the osmotic value of the vacuoles increases. The proton gradient is believed to drive the transport of maltose from the symbiont into the host. Another but light independent effect of the monensin treatment is the swelling of peripheral alveoles of the ciliates, likewise indicating that the alveolar membrane contains an active proton pump

Interferon β-1a in relapsing multiple sclerosis: four-year extension of the European IFNβ-1a Dose-C omparison Study

Background: Multiple sclerosis (MS) is a chronic disease requiring long-term monitoring of treatment. Objective: To assess the four-year clinical efficacy of intramuscular (IM) IFNb-1a in patients with relapsing MS from the European IFNb-1a Dose-C omparison Study. Methods: Patients who completed 36 months of treatment (Part 1) of the European IFNb-1a Dose-C omparison Study were given the option to continue double-blind treatment with IFNb-1a 30 mcg or 60 mcg IM once weekly (Part 2). Analyses of 48-month data were performed on sustained disability progression, relapses, and neutralizing antibody (NA b) formation. Results: O f 608/802 subjects who completed 36 months of treatment, 493 subjects continued treatment and 446 completed 48 months of treatment and follow-up. IFNb-1a 30 mcg and 60 mcg IM once weekly were equally effective for up to 48 months. There were no significant differences between doses over 48 months on any of the clinical endpoints, including rate of disability progression, cumulative percentage of patients who progressed (48 and 43, respectively), and annual relapse rates; relapses tended to decrease over 48 months. The incidence of patients who were positive for NAbs at any time during the study was low in both treatment groups. Conclusion: C ompared with 60-mcg IM IFNb-1a once weekly, a dose of 30 mcg IM IFNb-1a once weekly maintains the same clinical efficacy over four years

Minimizers for an aggregation model with attractive-repulsive interaction

We solve explicitly a certain minimization problem for probability measures involving an interaction energy that is repulsive at short distances and attractive at large distances. We complement earlier works by showing that part of the remaining parameter regime all minimizers are uniform distributions on a surface of a sphere, thus showing concentration on a lower dimensional set. Our method of proof uses convexity estimates on hypergeometric functions.Comment: 16 page

Aneuploidy Drives Genomic Instability in Yeast

Aneuploidy decreases cellular fitness, yet it is also associated with cancer, a disease of enhanced proliferative capacity. To investigate one mechanism by which aneuploidy could contribute to tumorigenesis, we examined the effects of aneuploidy on genomic stability. We analyzed 13 budding yeast strains that carry extra copies of single chromosomes and found that all aneuploid strains exhibited one or more forms of genomic instability. Most strains displayed increased chromosome loss and mitotic recombination, as well as defective DNA damage repair. Aneuploid fission yeast strains also exhibited defects in mitotic recombination. Aneuploidy-induced genomic instability could facilitate the development of genetic alterations that drive malignant growth in cancer

Dispersal in the Ordovician: Speciation patterns and paleobiogeographic analyses of brachiopods and trilobites

The Middle to Late Ordovician was a time of profound biotic diversification, paleoecological change, and major climate shifts. Yet studies examining speciation mechanisms and drivers of dispersal are lacking. In this study, we use Bayesian phylogenetics and maximum likelihood analyses in the R package BioGeoBEARS to reanalyze ten published data matrices of brachiopods and trilobites and produce time-calibrated species-level phylogenetic hypotheses with estimated biogeographic histories. Recovered speciation and biogeographic patterns were examined within four time slices to test for changes in speciation type across major tectonic and paleoclimatic events. Statistical model comparison showed that biogeographic models that incorporate long-distance founder-event speciation best fit the data for most clades, which indicates that this speciation type, along with vicariance and traditional dispersal, were important for Paleozoic benthic invertebrates. Speciation by dispersal was common throughout the study interval, but notably elevated during times of climate change. Vicariance events occurred synchronously among brachiopod and trilobite lineages, indicating that tectonic, climate, and ocean processes affected benthic and planktotrophic larvae similarly. Middle Ordovician inter-oceanic dispersal in trilobite lineages was influenced by surface currents along with volcanic island arcs acting as “stepping stones” between areas, indicating most trilobite species may have had a planktic protaspid stage. These factors also influenced brachiopod dispersal across oceanic basins among Laurentia, Avalonia, and Baltica. These results indicate that gyre spin-up and intensification of surface currents were important dispersal mechanisms during this time. Within Laurentia, surface currents, hurricane tracks, and upwelling zones controlled dispersal among basins. Increased speciation during the Middle Ordovician provides support for climatic facilitators for diversification during the Great Ordovician Biodiversification Event. Similarly, increased speciation in Laurentian brachiopod lineages during the Hirnantian indicates that some taxa experienced speciation in relation to major climate changes. Overall, this study demonstrates the substantial power and potential for likelihood-based methods for elucidating biotic patterns during the history of life.This study was supported by NSF (EF-1206750, EAR-0922067 to A.L.S.) and the Dry Dredgers Paleontological Research Award, the Paleontological Society Arthur J. Boucot Award, and an Ohio University Graduate Alumni Research Grant to A.R.L. N.J.M. was supported by Discovery Early Career Researcher Award (DECRA) DE150101773, funded by the Australian Research Council, and by The Australian National University. He was also supported by the National Institute for Mathematical and Biological Synthesis (NIMBioS), an Institute sponsored by the National Science Foundation, the U.S. Department of Homeland Security, and the U.S. Department of Agriculture through NSF Awards #EFJ0832858 and DBI-1300426, with additional support from The University of Tennessee, Knoxville. In addition, a NIMBioS short-term visitor award allowed A.R.L. to visit NIMBioS to begin collaboration with N.J.M. This is a contribution to the International Geoscience Programme (IGCP) Projects 591- The Early to Middle Paleozoic Revolution and 653- The Onset of the Great Ordovician Biodiversification Event

A new Late Agenian (MN2a, Early Miocene) fossil assemblage from Wallenried (Molasse Basin, Canton Fribourg, Switzerland)

Excavations of two fossiliferous layers in the Wallenried sand- and marl pit produced a very diversified vertebrate fauna. New material allows the reassessment of the taxonomic position of the ruminant taxa Andegameryx andegaviensis and endemic Friburgomeryx wallenriedensis. An emended diagnosis for the second species is provided and additional material of large and small mammals, as well as ectothermic vertebrates, is described. The recorded Lagomorpha show interesting morphological deviations from other Central European material, and probably represent a unique transitional assemblage with a co-occurrence of Titanomys, Lagopsis and Prolagus. Rodentia and Eulipotyphla belong to typical and well-known species of the Agenian of the Swiss Molasse Basin. Abundant small mammal teeth have allowed us to pinpoint the biostratigraphic age of Wallenried to late MN2a. The biostratigraphic age conforms to data derived from the charophyte assemblages and confirms the oldest occurrence of venomous snake fangs. The palaeoenvironmental context is quite complex. Sedimentary structures and fauna (fishes, frogs, salamanders, ostracods) are characteristic for a humid, lacustrine environment within a flood plain system

Distinct Effects of p19 RNA Silencing Suppressor on Small RNA Mediated Pathways in Plants

RNA silencing is one of the main defense mechanisms employed by plants to fight viruses. In change, viruses have evolved silencing suppressor proteins to neutralize antiviral silencing. Since the endogenous and antiviral functions of RNA silencing pathway rely on common components, it was suggested that viral suppressors interfere with endogenous silencing pathway contributing to viral symptom development. In this work, we aimed to understand the effects of the tombusviral p19 suppressor on endogenous and antiviral silencing during genuine virus infection. We showed that ectopically expressed p19 sequesters endogenous small RNAs (sRNAs) in the absence, but not in the presence of virus infection. Our presented data question the generalized model in which the sequestration of endogenous sRNAs by the viral suppressor contributes to the viral symptom development. We further showed that p19 preferentially binds the perfectly paired ds-viral small interfering RNAs (vsiRNAs) but does not select based on their sequence or the type of the 5’ nucleotide. Finally, co-immunoprecipitation of sRNAs with AGO1 or AGO2 from virus-infected plants revealed that p19 specifically impairs vsiRNA loading into AGO1 but not AGO2. Our findings, coupled with the fact that p19-expressing wild type Cymbidium ringspot virus (CymRSV) overcomes the Nicotiana benthamiana silencing based defense killing the host, suggest that AGO1 is the main effector of antiviral silencing in this host-virus combination

Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. Acknowledgements We would like to thank Dr Robert Griffith/CEH for providing DNA from soil samples and Dr Anthony Travis for his help with BioLinux. Sequencing was performed in NERC platform in Liverpool. CG-R was funded by a NERC fellowship NE/J019151/1. CQ was funded by a MRC fellowship (MR/M50161X/1) as part of the cloud infrastructure for microbial genomics consortium (MR/L015080/1).Peer reviewedPublisher PD