Transport of covariance matrices in the inhomogeneous magnetic field of the ATLAS experiment by the application of a semi-analytical method

In this paper we study the transport of track parameter covariance matrices - the so-called error propagation - in the inhomogeneous magnetic field of the ATLAS experiment. The Jacobian elements are transported in parallel with the track parameters, avoiding the inherent need of any purely numerical scheme of propagating a set of auxiliary tracks. We evaluate the quality of the transported Jacobians by a very thorough, purely numerical approach of obtaining the same derivatives, providing a quantitative understanding of the effects of including gradients of energy loss and the magnetic field on the accuracy of the error propagation. Irrespective of the accuracy of the underlying track parameter propagation, the method of parallel integration of the derivatives is demonstrated to be significantly faster than even the simplest numerical scheme. The error propagation presented in this paper is part of the simultaneous track and error propagation (STEP) algorithm of the common ATLAS tracking software

Track parameter propagation through the application of a new adaptive Runge-Kutta-Nystrom method in the ATLAS experiment

In this paper we study several fixed step and adaptive Runge-Kutta methods suitable for transporting track parameters through an inhomogeneous magnetic field. Moreover, we present a new adaptive Runge-Kutta-Nystrom method which estimates the local error of the extrapolation without introducing extra stages to the original Runge-Kutta-Nystrom method. Furthermore, these methods are compared for propagation accuracy and computing cost efficiency in the simultaneous track and error propagation (STEP) algorithm of the common ATLAS tracking software. The tests show the new adaptive Runge-Kutta-Nystrom method to be the most computing cost efficient

Factors affecting continuation of clean intermittent catheterisation in people with multiple sclerosis: results of the COSMOS mixed-methods study

Background:  Clean intermittent catheterisation (CIC) is often recommended for people with multiple sclerosis (MS).  Objective:  To determine the variables that affect continuation or discontinuation of the use of CIC.  Methods:  A three-part mixed-method study (prospective longitudinal cohort (n = 56), longitudinal qualitative interviews (n = 20) and retrospective survey (n = 456)) was undertaken, which identified the variables that influenced CIC continuation/discontinuation. The potential explanatory variables investigated in each study were the individual’s age, gender, social circumstances, number of urinary tract infections, bladder symptoms, presence of co-morbidity, stage of multiple sclerosis and years since diagnosis, as well as CIC teaching method and intensity.  Results:  For some people with MS the prospect of undertaking CIC is difficult and may take a period of time to accept before beginning the process of using CIC. Ongoing support from clinicians, support at home and a perceived improvement in symptoms such as nocturia were positive predictors of continuation. In many cases, the development of a urinary tract infection during the early stages of CIC use had a significant detrimental impact on continuation.  Conclusion:  Procedures for reducing the incidence of urinary tract infection during the learning period (i.e. when being taught and becoming competent) should be considered, as well as the development of a tool to aid identification of a person’s readiness to try CIC

Treatment of energy loss and multiple scattering in the context of track parameter and covariance matrix propagation in continuous material in the ATLAS experiment

In this paper we study the energy loss, its fluctuations, and the multiple scattering of particles passing through matter, with an emphasis on muons. In addition to the well-known Bethe-Bloch and Bethe-Heitler equations describing the mean energy loss from ionization and bremsstrahlung respectively, new parameterizations of the mean energy loss of muons from the direct e+e- pair production and photonuclear interactions are presented along with new estimates of the most probable energy loss and its fluctuations in the ATLAS calorimeters. Moreover, a new adaptive Highland/Moliere approach to finding the multiple scattering angle is taken to accomodate a wide range of scatterer thicknesses. Furthermore, tests of the muon energy loss, its fluctuations, and multiple scattering are done in the ATLAS calorimeters. The material effects described in this paper are all part of the simultaneous track and error propagation (STEP) algorithm of the common ATLAS tracking software

Precision determination of band offsets in strained InGaAs/GaAs quantum wells by C-V-profiling and Schroedinger-Poisson self-consistent simulation

The results of measurements and numerical simulation of charge carrier distribution and energy states in strained quantum wells In_xGa_{1-x}As/GaAs (0.06 < x < 0.29) by C-V-profiling are presented. Precise values of conduction band offsets for these pseudomorphic QWs have been obtained by means of self-consistent solution of Schroedinger and Poisson equations and following fitting to experimental data. For the conduction band offsets in strained In_xGa_{1-x}As/GaAs - QWs the expression DE_C(x) = 0.814x - 0.21x^2 has been obtained.Comment: 9 pages, 12 figures, RevTeX

Pericellular activation of hepatocyte growth factor by the transmembrane serine proteases matriptase and hepsin, but not by the membrane-associated protease uPA

HGF (hepatocyte growth factor) is a pleiotropic cytokine homologous to the serine protease zymogen plasminogen that requires canonical proteolytic cleavage to gain functional activity. The activating proteases are key components of its regulation, but controversy surrounds their identity. Using quantitative analysis we found no evidence for activation by uPA (urokinase plasminogen activator), despite reports that this is a principal activator of pro-HGF. This was unaffected by a wide range of experimental conditions, including the use of various molecular forms of both HGF and uPA, and the presence of uPAR (uPA receptor) or heparin. In contrast the catalytic domains of the TTSPs (type-II transmembrane serine proteases) matriptase and hepsin were highly efficient activators (50% activation at 0.1 and 3.4 nM respectively), at least four orders of magnitude more efficient than uPA. PS-SCL (positional-scanning synthetic combinatorial peptide libraries) were used to identify consensus sequences for the TTSPs, which in the case of hepsin corresponded to the pro-HGF activation sequence, demonstrating a high specificity for this reaction. Both TTSPs were also found to be efficient activators at the cell surface. Activation of pro-HGF by PC3 prostate carcinoma cells was abolished by both protease inhibition and matriptase-targeting siRNA (small interfering RNA), and scattering of MDCK (Madin–Darby canine kidney) cells in the presence of pro-HGF was abolished by inhibition of matriptase. Hepsin-transfected HEK (human embryonic kidney)-293 cells also activated pro-HGF. These observations demonstrate that, in contrast with the uPA/uPAR system, the TTSPs matriptase and hepsin are direct pericellular activators of pro-HGF, and that together these proteins may form a pathway contributing to their involvement in pathological situations, including cancer

Refitting of combined inner detector and muon spectrometer tracks from Monte Carlo samples by using the Kalman fitter and the STEP algorithm in the ATLAS experiment

In this paper we refit combined muon tracks using the Kalman fitter and the simultaneous track and error propagation (STEP) algorithm of the ATLAS tracking software. The muon tracks are simulated by GEANT4 in the full detector description, reconstructed by MUID, and refitted by the Kalman fitter in the ATLAS TrackingGeometry. The relative transverse momentum resolution of the refitted tracks is compared to the resolution of the refits done by the global chi-square track fitter, along with the resolution found by the MUID and STACO muon combination algorithms. Reconstructed invariant masses are compared in a similar way

CP asymmetry in B→ϕKSB \to \phi K_S in a general two-Higgs-doublet model with fourth-generation quarks

We discuss the time-dependent CP asymmetry of decay $B \to \phi K_S$ in an extension of the Standard Model with both two Higgs doublets and additional fourth-generation quarks. We show that although the Standard Model with two-Higgs-doublet and the Standard model with fourth generation quarks alone are not likely to largely change the effective $\sin 2 \beta$ from the decay of $B \to \phi K_S$, the model with both additional Higgs doublet and fourth-generation quarks can easily account for the possible large negative value of $\sin 2 \beta$ without conflicting with other experimental constraints. In this model, additional large CP violating effects may arise from the flavor changing Yukawa interactions between neutral Higgs bosons and the heavy fourth generation down type quark, which can modify the QCD penguin contributions. With the constraints obtained from $b \to s \bar{s} s$ processes such as $B \to X_s \gamma$ and $\Delta m_{B_s^0}$, this model can lead to the effective $\sin 2 \beta$ to be as large as $- 0.4$ in the CP asymmetry of $B \to \phi K_S$.Comment: 13 pages, 5 figures, references added, to appear in Eur.Phys.J.