Patterns of arboreal and terrestrial space use by non-volant small mammals in an Araucaria forest of southern Brazil

Despite the advances in the techniques for researching arboreal small mammals, detailed ecological data, such as habitat use patterns, are practically nonexistent for many species. Using 150 live-traps installed on the ground, understory (1.0-5.0m) and canopy (>5.0m) we investigated patterns of arboreal and terrestrial space use by small mammals in an Araucaria Forest in southern Brazil (29°29′08″S; 50°12′26″W). We also measured 19 microhabitat variables that could potentially influence the abundance of such mammals on each trap station. The results indicated that Akodon montensis and A. serrensis were mainly terrestrial. Delomys dorsalis was also terrestrial, but it also used understory (17.24% of captures). Juliomys sp. and Gracilinanus microtarsus were the most arboreal small mammals recorded. A. montensis was associated with dense vegetation, while A. serrensis selected positively opened areas. Juliomys sp. and G. microtarsus were associated to microhabitat variables related to the access and movement within the canopy. Moreover, bromeliads on arboreal layer were an important factor for these two arboreal species. This is the first study to report microhabitat associations by Juliomys sp. and A. serrensis, and we demonstrated that vertical stratification and microhabitat use were both synergic mechanisms to determine habitat use by small mammals on the Araucaria Forest of southern Brazil

BioTIME 2.0: Expanding and Improving a Database of Biodiversity Time Series

Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R package (BioTIMEr) to facilitate use of the database. Main Types of Variables Included The database is composed of one main data table containing the abundance records and 11 metadata tables. The data are organised in a hierarchy of scales where 11,989,233 records are nested in 1,603,067 sample events, from 553,253 sampling locations, which are nested in 708 studies. A study is defined as a sampling methodology applied to an assemblage for a minimum of 2 years. Spatial Location and Grain Sampling locations in BioTIME are distributed across the planet, including marine, terrestrial and freshwater realms. Spatial grain size and extent vary across studies depending on sampling methodology. We recommend gridding of sampling locations into areas of consistent size. Time Period and Grain The earliest time series in BioTIME start in 1874, and the most recent records are from 2023. Temporal grain and duration vary across studies. We recommend doing sample-level rarefaction to ensure consistent sampling effort through time before calculating any diversity metric. Major Taxa and Level of Measurement The database includes any eukaryotic taxa, with a combined total of 56,400 taxa. Software Format csv and. SQL

Differences in richness and composition of gastrointestinal parasites of small rodents (Cricetidae, Rodentia) in a continental and insular area of the Atlantic Forest in Santa Catarina state, Brazil

The first and only study on gastrointestinal parasites of wild rodents in the Island of Santa Catarina was done in 1987. The aim of this study was to identify intestinal parasites from wild rodents in Santo Amaro da Imperatriz and Santa Catariana Island, and to compare the richness and composition of the gastrointestinal parasite community of both areas. Rodents were captured with live traps, and feces were screened using the sedimentation method and optical microscopy. The following species of rodents were captured in the two areas: Akodon montensis, Euryoryzomys russatus, Oligoryzomys nigripes and Nectomys squamipes. In Santo Amaro da Impetratriz, prevalent parasites were: A. montensis (51%), E. russatus (62%), O. nigripes (53%) and N. squamipes (20%). From the Island of Santa Catarina the rodent prevalence rates were: A. montensis (43%), E. russatus (59%), O. nigripes (30%) and N. squamipes (33%) and the collected parasites were: Hymenolepis sp., Longistriata sp., Strongyloides sp., Hassalstrongylus sp., Syphacia sp., Trichomonas sp., Ancylostomidae, Trichuridae, Oxyuridae and Eucoccidiorida. The species richness (10.6 ± 0.7) of the endoparasite comunity in the area located on the continent was higher (p < 0.01) and different (p = 0.001) from that of the area located on the island (6.9 ± 0.5)

Evaluation of abundance indexes in open population studies: a comparison in populations of small mammals in southern Brazil

Many manuscripts comparing populations and/or analysing the structure of animal communities use indexes of captures as synonymous of abundance. However, the basic methods more suitable to this assumption - probabilistic estimates based on equal capture probability - have not been considered. In this study, the deviations caused by different types of capture indexes are compared with a common probabilistic population estimator (Cormack-Jolly-Seber). The analyses showed that Minimum Number Known Alive (MNKA) and the number of individuals showed greater association with the population estimator than with non-probabilistic indexes based on recaptures. Therefore, none of the indexes presented the same performance to estimate population size estimation which can lead to ecological misinterpretation. Some recommendations were also described

Evaluation of abundance indexes in open population studies: a comparison in populations of small mammals in southern Brazil

Many manuscripts comparing populations and/or analysing the structure of animal communities use indexes of captures as synonymous of abundance. However, the basic methods more suitable to this assumption - probabilistic estimates based on equal capture probability - have not been considered. In this study, the deviations caused by different types of capture indexes are compared with a common probabilistic population estimator (Cormack-Jolly-Seber). The analyses showed that Minimum Number Known Alive (MNKA) and the number of individuals showed greater association with the population estimator than with non-probabilistic indexes based on recaptures. Therefore, none of the indexes presented the same performance to estimate population size estimation which can lead to ecological misinterpretation. Some recommendations were also described

The role of melanism in oncillas on the temporal segregation of nocturnal activity

The occurrence of coat colour polymorphisms in populations may promote the ecological success of species by permitting a wider spectrum of use of different subsets of available resources. We conducted an analysis of temporal segregation by comparing night brightness with nocturnal activity of spotted and melanistic oncillas (Leopardus tigrinus). Melanistic oncillas were more active during bright nights and spotted oncillas and other species were more active during dark nights. Each colour morph occupied a temporal niche outside the confidence interval of the other colour morph, demonstrating the ecological significance of polymorphic colour patterns in this felid species

The role of melanism in oncillas on the temporal segregation of nocturnal activity

The occurrence of coat colour polymorphisms in populations may promote the ecological success of species by permitting a wider spectrum of use of different subsets of available resources. We conducted an analysis of temporal segregation by comparing night brightness with nocturnal activity of spotted and melanistic oncillas (Leopardus tigrinus). Melanistic oncillas were more active during bright nights and spotted oncillas and other species were more active during dark nights. Each colour morph occupied a temporal niche outside the confidence interval of the other colour morph, demonstrating the ecological significance of polymorphic colour patterns in this felid species