11,102 research outputs found

    Accumulation of aqueous and nanoparticulate silver by the marine gastropod littorina littorea

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    The accumulation of Ag by the marine herbivorous gastropod, Littorina littorea, has been studied in a series of exposures in which the metal was added in aqueous form and as nanoparticles, both in the presence and absence of contaminated algal food (Ulva lactuca). Significant accumulation occurred in the gill, kidney, stomach and visceral mass when the snail was exposed to aqueous Ag in the absence of food. Despite the consumption of U. lactuca that had been previously contaminated by Ag, no accumulation was observed from the dietary route. When added as nanoparticles, accumulation of Ag was only measured in the head and gill and only in the absence of contaminated food. These observations suggest that Ag is most bioavailable to L. littorina when in true solution and that Ag measured in external tissues of the snail following exposure to nanoparticles arises from some physical association that does not result in significant transfer of the metal to internal organs. © 2012 Springer Science+Business Media Dordrecht

    Intra-specific responses of Cymodocea nodosa to macro-nutrient, irradiance and copper exposure

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    Excess macro-nutrients, metal contamination and light limitation are three of the most commonly encountered anthropogenic stressors affecting seagrass meadows. In this study, the effects of different combinations of nutrients (N-NO3, P-PO4), copper and irradiance were investigated in shoots of Cymodocea nodosa collected from three meadows in the N. Aegean Sea, one (Nea Karvali) impacted by anthropogenically-derived environmental stressors and two in more pristine condition (Thasos, Brasidas). In a series of laboratory experiments, shoots were exposed to varying nutrient and heavy metal concentrations, as well as varying irradiance levels, for 8days and the effective quantum yield (δF/Fm') and leaf elongation were quantified. Results showed that C. nodosa increased δF/Fm' under high nutrient concentrations (30μΜ N-NO3--2μΜ P-PO43-) but significant differences were only apparent in shoots collected from the oligotrophic-less stressed meadows. Irradiance affected δF/Fm' significantly in all shoots irrespective of source and PO4-P concentration, while higher values were measured under low light conditions and it was identified as the main pathway of eutrophication stress in N. Aegean Cymodocea meadows. Shoots, independently of acclimation were tolerant to copper enrichment, with only the highest copper concentrations (4.7 and 7.9μM) having significant negative effects on δF/Fm'. Shoots from the more pristine meadows were less affected by Cu than those from the highly stressed meadow

    Extra- and intra-cellular accumulation of platinum group elements by the marine microalga, Chlorella stigmatophora.

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    To better understand the marine biogeochemistry of the platinum group elements (PGE), Rh(III), Pd(II) and Pt(IV) were added in combination and at ppb concentrations to cultures of the marine microalga, Chlorella stigmatophora, maintained in sea water at 15 °C and under 60 μmol m(-2) s(-1) PAR. The accumulation of PGE was established in short-term (24-h) exposures, and under varying conditions of algal biomass and PGE concentration, and in a longer-term exposure (156-h) by ICP-MS analysis of sea water and nitric acid digests and EDTA washes of the alga. In short-term exposures, and under all conditions, the extent of accumulation by C. stigmatophora was in the order: Rh > Pd >> Pt; and Pd was internalised (or resistant to EDTA extraction) to a considerably greater extent than Rh and Pt. Accumulation isotherms were quasi-linear up to added PGE concentrations of 30 μg L(-1) and all metals displayed a significant reduction in accumulation on a weight-normalised basis with increasing density (biomass) of C. stigmatophora, an effect attributed to the production of exudates able to stabilise metals in sea water through complexation. In the longer-term exposure, kinetic constraints on the reactivities of Rh and, in particular, Pt, resulted in final degrees of accumulation and internalisation by C. stigmatophora that were greatest for Rh and similar between Pd and Pt. Among the PGE, therefore, Rh is predicted to participate in biological removal and transport processes in the marine environment to the greatest extent while decoupling in the biogeochemistries of Pd and Pt is predicted in shorter-term or more transient processes

    Metal accumulation kinetics by the estuarine macroalga, Fucusceranoides

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    The kinetics of Cu, Cd and Pb accumulation by the macroalga, Fucus ceranoides, was studied under simulated estuarine conditions. Accumulation of Cu and Pb proceeded via a pseudo-first-order reaction that was reversible, suggesting desorption or efflux of accumulated metal, with forward rate constants on the order of 0.1h-1. For both metals, reaction reversibility increased and the equilibrium constant decreased with increasing salinity (from 1 to 33.5) and system response times were <10h throughout. Accumulation of Cd proceeded via a first-order reaction that was irreversible, suggesting little desorption or efflux of metal, with rate constants that decreased with increasing salinity (from 0.023 to 0.015h-1) and reaction half-lives ranging from approximately 30-50h. Inorganic equilibrium speciation calculations suggest that interactions of Cu, Cd and Pb principally involve the respective free ions, but that additional ions (e.g. CdCl+) and biotic processes may also be significant. •Accumulation of Cu, Cd and Pb by the estuarine macroalga, Fucus ceranoides, decreases along a salinity gradient.•Accumulation of Cu and Pb proceeds via a reversible pseudo-first-order reaction.•In contrast, accumulation of Cd proceeds via an irreversible first-order reaction.•Differences in reaction mechanisms are attributed to differences in the ability of metals to be internalised. © 2013 Elsevier Ltd

    DNA methylation profiling to assess pathogenicity of BRCA1 unclassified variants in breast cancer

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    Germline pathogenic mutations in BRCA1 increase risk of developing breast cancer. Screening for mutations in BRCA1 frequently identifies sequence variants of unknown pathogenicity and recent work has aimed to develop methods for determining pathogenicity. We previously observed that tumor DNA methylation can differentiate BRCA1-mutated from BRCA1-wild type tumors. We hypothesized that we could predict pathogenicity of variants based on DNA methylation profiles of tumors that had arisen in carriers of unclassified variants. We selected 150 FFPE breast tumor DNA samples [47 BRCA1 pathogenic mutation carriers, 65 BRCAx (BRCA1-wild type), 38 BRCA1 test variants] and analyzed a subset (n=54) using the Illumina 450K methylation platform, using the remaining samples for bisulphite pyrosequencing validation. Three validated markers (BACH2, C8orf31, and LOC654342) were combined with sequence bioinformatics in a model to predict pathogenicity of 27 variants (independent test set). Predictions were compared with standard multifactorial likelihood analysis. Prediction was consistent for c.5194-12G>A (IVS 19-12 G>A) (P>0.99); 13 variants were considered not pathogenic or likely not pathogenic using both approaches. We conclude that tumor DNA methylation data alone has potential to be used in prediction of BRCA1 variant pathogenicity but is not independent of estrogen receptor status and grade, which are used in current multifactorial models to predict pathogenicity

    Recognition without identification, erroneous familiarity, and déjà vu

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    Déjà vu is characterized by the recognition of a situation concurrent with the awareness that this recognition is inappropriate. Although forms of déjà vu resolve in favor of the inappropriate recognition and therefore have behavioral consequences, typical déjà vu experiences resolve in favor of the awareness that the sensation of recognition is inappropriate. The resultant lack of behavioral modification associated with typical déjà vu means that clinicians and experimenters rely heavily on self-report when observing the experience. In this review, we focus on recent déjà vu research. We consider issues facing neuropsychological, neuroscientific, and cognitive experimental frameworks attempting to explore and experimentally generate the experience. In doing this, we suggest the need for more experimentation and amore cautious interpretation of research findings, particularly as many techniques being used to explore déjà vu are in the early stages of development.PostprintPeer reviewe

    Ecological and methodological drivers of species' distribution and phenology responses to climate change

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    Climate change is shifting species’ distribution and phenology. Ecological traits, such as mobility or reproductive mode, explain variation in observed rates of shift for some taxa. However, estimates of relationships between traits and climate responses could be influenced by how responses are measured. We compiled a global data set of 651 published marine species’ responses to climate change, from 47 papers on distribution shifts and 32 papers on phenology change. We assessed the relative importance of two classes of predictors of the rate of change, ecological traits of the responding taxa and methodological approaches for quantifying biological responses. Methodological differences explained 22% of the variation in range shifts, more than the 7.8% of the variation explained by ecological traits. For phenology change, methodological approaches accounted for 4% of the variation in measurements, whereas 8% of the variation was explained by ecological traits. Our ability to predict responses from traits was hindered by poor representation of species from the tropics, where temperature isotherms are moving most rapidly. Thus, the mean rate of distribution change may be underestimated by this and other global syntheses. Our analyses indicate that methodological approaches should be explicitly considered when designing, analysing and comparing results among studies. To improve climate impact studies, we recommend that (1) reanalyses of existing time series state how the existing data sets may limit the inferences about possible climate responses; (2) qualitative comparisons of species’ responses across different studies be limited to studies with similar methodological approaches; (3) meta-analyses of climate responses include methodological attributes as covariates; and (4) that new time series be designed to include the detection of early warnings of change or ecologically relevant change. Greater consideration of methodological attributes will improve the accuracy of analyses that seek to quantify the role of climate change in species’ distribution and phenology changes
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