Effect of Ethanol on Microbial Community Structure and Function During Natural Attenuation of Benzene, Toluene, and \u3cem\u3eo\u3c/em\u3e-Xylene in a Sulfate-reducing Aquifer

Ethanol (EtOH) is a commonly used fuel oxygenate in reformulated gasoline and is an alternative fuel and fuel supplement. Effects of EtOH release on aquifer microbial ecology and geochemistry have not been well characterized in situ. We performed a controlled field release of petroleum constituents (benzene (B), toluene (T), o-xylene (o-X) at ∼1–3 mg/L each) with and without EtOH (∼500 mg/L). Mixed linear modeling (MLM) assessed effects on the microbial ecology of a naturally sulfidic aquifer and how the microbial community affected B, T, and o-X plume lengths and aquifer geochemistry. Changes in microbial community structure were determined by quantitative polymerase chain reaction (qPCR) targeting Bacteria, Archaea, and sulfate reducing bacteria (SRB); SRB were enumerated using a novel qPCR method targeting the adenosine-5′-phosphosulfate reductase gene. Bacterial and SRB densities increased with and without EtOH-amendment (1−8 orders of magnitude). Significant increases in Archaeal species richness; Archaeal cell densities (3–6 orders of magnitude); B, T, and o-X plume lengths; depletion of sulfate; and induction of methanogenic conditions were only observed with EtOH-amendment. MLM supported the conclusion that EtOH-amendment altered microbial community structure and function, which in turn lowered the aquifer redox state and led to a reduction in bioattenuation rates of B, T, and o-X

Identifying Geographic Areas Where Children May Be At-risk of Lead Poisoning and Assessing the Need for Lead Abatement in Urban Areas: A Case Study in Hamilton, Ontario

Thirty years since the removal of lead from gasoline, lead still poses a health risk. Children are most at-risk for adverse health outcomes caused by lead toxicity due to both behavioural (e.g., hand-to-mouth behaviour) and physiological differences (i.e., increased intake of lead by body weight, higher uptake rate and a higher vulnerability to the effects of lead) compared to adults (Yeoh et al., 2009). As a result, governments must identify children that may be at-risk of lead poisoning and develop practical methods to mitigate lead exposure. Before a government can develop a policy to help mitigate exposure of lead for children, we need to understand the spatial distribution of lead within the city. A popular spatial model used within air pollution research may allow more accurate, and more localized predictions than the most common interpolation method, kriging. Land use regression (LUR) is a technique leveraging multiple predictor variables to help estimate the spatial distribution of the dependent variable. By using historical sources of lead, LUR can be used to model soil lead levels (SLL) with localized variation. Unfortunately, spurious relationships can be the basis of a LUR model, which may lead to an overfitted spatial model resulting in a model with little generalizability and questionable ability to estimate the dependent variable at unobserved locations. Ultimately, Empirical Bayesian Kriging may be the best option for soil contamination research due to its ability to provide a smoothed prediction surface and its dependence on the spatial structure of the data to provide estimations. The benefit to society and the return on investment (ROI) is often the justification for lead remediation. Gould (2009) estimates a $17 to$221 ROI for every dollar spent on lead hazard control. One of the main components of this estimate of ROI comes from the decrease in intelligence quotient (IQ) that a child may experience as a consequence of lead toxicity. There are three main ways that a decrease in IQ can negatively impact the economy, (i) lower potential lifetime earnings, (ii) reduced tax revenues, and (iii) higher spending on special education (Gould, 2009). Since IQ has such a significant role in the ROI estimates, chapter 3 seeks to achieve a greater understanding of the relationship between blood lead levels (BLLs) and IQ. The loss of IQ points for an increase in blood lead concentration proposed by Lanphear et al. (2005) and referenced by Gould (2009) is significantly higher than what we found in our meta-analysis. Thus, the projected ROI proposed by Gould (2009) may be much lower than previously calculated. In the final chapter, the cost associated with permanent lead abatement is investigated based on ROI projections as a case study in Hamilton, Ontario. We show that, in most cases, permanent lead remediation is far too expensive for a municipal government. Furthermore, the capital initially invested may not be distributed back into the local economy, as the ROI suggests. We suggest that municipal governments make decisions based on need, rather than basing remediation decisions on ROI projections. Furthermore, we recommend the use of hazard quotient maps to help justify lead remediation as a more accurate representation of potential lead toxicity, instead of only looking at SLL exceedances across the city.DissertationDoctor of Philosophy (PhD

Toward a new data standard for combined marine biological and environmental datasets - expanding OBIS beyond species occurrences

The Ocean Biogeographic Information System (OBIS) is the world's most comprehensive online, open-access database of marine species distributions. OBIS grows with millions of new species observations every year. Contributions come from a network of hundreds of institutions, projects and individuals with common goals: to build a scientific knowledge base that is open to the public for scientific discovery and exploration and to detect trends and changes that inform society as essential elements in conservation management and sustainable development. Until now, OBIS has focused solely on the collection of biogeographic data (the presence of marine species in space and time) and operated with optimized data flows, quality control procedures and data standards specifically targeted to these data. Based on requirements from the growing OBIS community to manage datasets that combine biological, physical and chemical measurements, the OBIS-ENV-DATA pilot project was launched to develop a proposed standard and guidelines to make sure these combined datasets can stay together and are not, as is often the case, split and sent to different repositories. The proposal in this paper allows for the management of sampling methodology, animal tracking and telemetry data, biological measurements (e.g., body length, percent live cover, ...) as well as environmental measurements such as nutrient concentrations, sediment characteristics or other abiotic parameters measured during sampling to characterize the environment from which biogeographic data was collected. The recommended practice builds on the Darwin Core Archive (DwC-A) standard and on practices adopted by the Global Biodiversity Information Facility (GBIF). It consists of a DwC Event Core in combination with a DwC Occurrence Extension and a proposed enhancement to the DwC MeasurementOrFact Extension. This new structure enables the linkage of measurements or facts - quantitative and qualitative properties - to both sampling events and species occurrences, and includes additional fields for property standardization. We also embrace the use of the new parentEventID DwC term, which enables the creation of a sampling event hierarchy. We believe that the adoption of this recommended practice as a new data standard for managing and sharing biological and associated environmental datasets by IODE and the wider international scientific community would be key to improving the effectiveness of the knowledge base, and will enhance integration and management of critical data needed to understand ecological and biological processes in the ocean, and on land.Fil: De Pooter, Daphnis. Flanders Marine Institute; BélgicaFil: Appeltans, Ward. UNESCO-IOC; BélgicaFil: Bailly, Nicolas. Hellenic Centre for Marine Research, MedOBIS; GreciaFil: Bristol, Sky. United States Geological Survey; Estados UnidosFil: Deneudt, Klaas. Flanders Marine Institute; BélgicaFil: Eliezer, Menashè. Istituto Nazionale di Oceanografia e di Geofisica Sperimentale; ItaliaFil: Fujioka, Ei. University Of Duke. Nicholas School Of Environment. Duke Marine Lab; Estados UnidosFil: Giorgetti, Alessandra. Istituto Nazionale di Oceanografia e di Geofisica Sperimentale; ItaliaFil: Goldstein, Philip. University of Colorado Museum of Natural History, OBIS; Estados UnidosFil: Lewis, Mirtha Noemi. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Centro para el Estudio de Sistemas Marinos; ArgentinaFil: Lipizer, Marina. Istituto Nazionale di Oceanografia e di Geofisica Sperimentale; ItaliaFil: Mackay, Kevin. National Institute of Water and Atmospheric Research; Nueva ZelandaFil: Marin, Maria Rosa. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico; ArgentinaFil: Moncoiffé, Gwenaëlle. British Oceanographic Data Center; Reino UnidoFil: Nikolopoulou, Stamatina. Hellenic Centre for Marine Research, MedOBIS; GreciaFil: Provoost, Pieter. UNESCO-IOC; BélgicaFil: Rauch, Shannon. Woods Hole Oceanographic Institution; Estados UnidosFil: Roubicek, Andres. CSIRO Oceans and Atmosphere; AustraliaFil: Torres, Carlos. Universidad Autonoma de Baja California Sur; MéxicoFil: van de Putte, Anton. Royal Belgian Institute for Natural Sciences; BélgicaFil: Vandepitte, Leen. Flanders Marine Institute; BélgicaFil: Vanhoorne, Bart. Flanders Marine Institute; BélgicaFil: Vinci, Mateo. Istituto Nazionale di Oceanografia e di Geofisica Sperimentale; ItaliaFil: Wambiji, Nina. Kenya Marine and Fisheries Research Institute; KeniaFil: Watts, David. CSIRO Oceans and Atmosphere; AustraliaFil: Klein Salas, Eduardo. Universidad Simon Bolivar; VenezuelaFil: Hernandez, Francisco. Flanders Marine Institute; Bélgic

Managing Discourse: The Therapeutic Touch Debate

In this thesis I examine the debate surrounding Therapeutic Touch, a controversial energetic healing modality being practiced by registered nurses in biomedical institutions across North America. The debate surrounding the therapy takes place within medical journals, popular media articles, and on the internet. Within the debate, definitions of illness etiology, appropriate treatment, patient management, and alternative therapy use are contested by Therapeutic Touch proponents and critics. Through discursive analysis, interviews with local participants in the debate, and participant observation within the TT community, I present an analysis of the issues being contested and of the discursive strategies used by proponents and critics within the debate. The debate is contextualized in two ways: first, as an instance of medical heresy, in which an alternative healing group arises within the orthodox medical community and struggles to maintain itself within biomedical discourse and institutions; second, I contextualize the debate as an example of the wider trend towards integrative medicine in North America. Integrative medicine sees alternative therapies being increasingly used within health care delivery systems, either by alternative practitioners, or by biomedical practitioners who have co-opted alternative techniques. I argue that Therapeutic Touch proponents have utilized several discursive strategies in presenting and arguing for their alternative healing model. These strategies surround the issues of professional legitimacy, scientific validity, and TT’s perception as religious or spiritual. Therapeutic Touch proponents manage their discourse by conforming it to orthodox biomedical discourse and by pursuing a strategy of professionalization. Through this management process, they have been able to maintain a marginal presence within biomedicine.ThesisMaster of Arts (MA

Managing Discourse: Medical Heresy, Integrative Medicine and the Therapeutic Touch Debate

In this thesis I examine the debate surrounding Therapeutic Touch, a controversial energetic healing modality being practiced by registered nurses in biomedical institutions across North America. The debate surrounding the therapy takes place within medical journals, popular media articles, and on the internet. Within the debate, definitions of illness etiology, appropriate treatment, patient management, and alternative therapy use are contested by Therapeutic Touch proponents and critics. Through discursive analysis, interviews with local participants in the debate, and participant observation within the TT community, I present an analysis of the issues being contested and of the discursive strategies used by proponents and critics within the debate. The debate is contextualized in two ways: first, as an instance of medical heresy, in which an alternative healing group arises within the orthodox medical community and struggles to maintain itself within biomedical discourse and institutions; second, I contextualize the debate as an example of the wider trend towards integrative medicine in North America. Integrative medicine sees alternative therapies being increasingly used within health care delivery systems, either by alternative practitioners, or by biomedical practitioners who have co-opted alternative techniques. I argue that Therapeutic Touch proponents have utilized several discursive strategies in presenting and arguing for their alternative healing model. These strategies surround the issues of professional legitimacy, scientific validity, and TT’s perception as religious or spiritual. Therapeutic Touch proponents manage their discourse by conforming it to orthodox biomedical discourse and by pursuing a strategy of professionalization. Through this management process, they have been able to maintain a marginal presence within biomedicine.ThesisMaster of Arts (MA

PRELIMINARY DEVELOPMENT OF A RECONFIGURABLE GARMENT SYSTEM FOR INTERACTIVE BIOMECHANICS

This paper presents a garment system that uses electronic textile strain sensors attached to a host garment to enable interactive biomechanical monitoring and biofeedback. A conventional compression garment modified to include strategically placed fastening markers and a corresponding e-textile strain sensor were used to monitor knee flexion and extension during AFL kicking. The output of the garment system was compared with that of a Vicon. During repeated subject kicking the garment system displayed stable operation suggesting it was suitable for use in field based skill interventions involving interactive biofeedback

Visualising Combined Time Use Patterns of Children's Activities and Their Association with Weight Status and Neighbourhood Context.

Compositional data techniques are an emerging method in physical activity research. These techniques account for the complexities of, and interrelationships between, behaviours that occur throughout a day (e.g., physical activity, sitting, and sleep). The field of health geography research is also developing rapidly. Novel spatial techniques and data visualisation approaches are increasingly being recognised for their utility in understanding health from a socio-ecological perspective. Linking compositional data approaches with geospatial datasets can yield insights into the role of environments in promoting or hindering the health implications of the daily time-use composition of behaviours. The 7-day behaviour data used in this study were derived from accelerometer data for 882 Auckland school children and linked to weight status and neighbourhood deprivation. We developed novel geospatial visualisation techniques to explore activity composition over a day and generated new insights into links between environments and child health behaviours and outcomes. Visualisation strategies that integrate compositional activities, time of day, weight status, and neighbourhood deprivation information were devised. They include a ringmap overview, small-multiple ringmaps, and individual and aggregated time⁻activity diagrams. Simultaneous visualisation of geospatial and compositional behaviour data can be useful for triangulating data from diverse disciplines, making sense of complex issues, and for effective knowledge translation

Ethnic variations in compulsory detention under the Mental Health Act: a systematic review and meta-analysis of international data

Background Evidence suggests that black, Asian and minority ethnic (BAME) groups have an increased risk of involuntary psychiatric care. However, to our knowledge, there is no published meta-analysis that brings together both international and UK literature and allows for comparison of the two. This study examined compulsory detention in BAME and migrant groups in the UK and internationally, and aimed to expand upon existing systematic reviews and meta-analyses of the rates of detention for BAME populations. Methods For this systematic review and meta-analysis, we searched five databases (PsychINFO, MEDLINE, Cochrane Controlled Register of Trials, Embase, and CINAHL) for quantitative studies comparing involuntary admission, readmission, and inpatient bed days between BAME or migrant groups and majority or native groups, published between inception and Dec 3, 2018. We extracted data on study characteristics, patient-level data on diagnosis, age, sex, ethnicity, marital status, and occupational status, and our outcomes of interest (involuntary admission to hospital, readmission to hospital, and inpatient bed days) for meta-analysis. We used a random-effects model to compare disparate outcome measures. We assessed explanations offered for the differences between minority and majority groups for the strength of the evidence supporting them. This study is prospectively registered with PROSPERO, number CRD42017078137. Findings Our search identified 9511 studies for title and abstract screening, from which we identified 296 potentially relevant full-text articles. Of these, 67 met the inclusion criteria and were reviewed in depth. We added four studies after reference and citation searches, meaning 71 studies in total were included. 1 953 135 participants were included in the studies. Black Caribbean patients were significantly more likely to be compulsorily admitted to hospital compared with those in white ethnic groups (odds ratio 2·53, 95% CI 2·03–3·16, p<0·0001). Black African patients also had significantly increased odds of being compulsorily admitted to hospital compared with white ethnic groups (2·27, 1·62–3·19, p<0·0001), as did, to a lesser extent, south Asian patients (1·33, 1·07–1·65, p=0·0091). Black Caribbean patients were also significantly more likely to be readmitted to hospital compared with white ethnic groups (2·30, 1·22–4·34, p=0·0102). Migrant groups were significantly more likely to be compulsorily admitted to hospital compared with native groups (1·50, 1·21–1·87, p=0·0003). The most common explanations for the increased risk of detainment in BAME populations included increased prevalence of psychosis, increased perceived risk of violence, increased police contact, absence of or mistrust of general practitioners, and ethnic disadvantages. Interpretation BAME and migrant groups are at a greater risk of psychiatric detention than are majority groups, although there is variation across ethnic groups. Attempts to explain increased detention in ethnic groups should avoid amalgamation and instead carry out culturally-specific, hypothesis-driven studies to examine the numerous contributors to varying rates of detention. Funding University College London Hospitals National Institute for Health Research (NIHR) Biomedical Research Centre, NIHR Biomedical Research Centre at South London and Maudsley NHS Foundation Trust, King's College London, and NIHR Collaboration for Leadership in Applied Health Research and Care North Thames at Bart's Health NHS Trust