BCS-Universal Ratios within the Van Hove Scenario

The central result of BCS theory are the Universal Ratios which do not depend on physical parameters of the superconductor under study. Several attempts have been made to introduce the van Hove Scenario within BCS theory but in none of them the Universal Ratios of conventional superconductivity appear to be a number independent of parameters. This fact prevents the precise definition of a deviation from the BCS value for a particular superconductor. This concept is at the basis of several applications of BCS theory in characterizing conventional superconductors. We define a system that constitutes a weak coupling limit that retains the essential features of the high-Tc oxides and which does not differ in any essential way from other models widely used in generalizations of BCS theory to high-Tc superconductors. The difference is that we found a natural way of dealing with the mathematics of the problem so as to get Universal Ratios in the same sense as in conventional superconductivity.Comment: 11 PAGES, NO FIGURES, REVTEX 3.

Single-molecule microscopy reveals new insights into nucleotide selection by DNA polymerase I.

The mechanism by which DNA polymerases achieve their extraordinary accuracy has been intensely studied because of the linkage between this process and mutagenesis and carcinogenesis. Here, we have used single-molecule fluorescence microscopy to study the process of nucleotide selection and exonuclease action. Our results show that the binding of Escherichia coli DNA polymerase I (Klenow fragment) to a primer-template is stabilized by the presence of the next correct dNTP, even in the presence of a large excess of the other dNTPs and rNTPs. These results are consistent with a model where nucleotide selection occurs in the open complex prior to the formation of a closed ternary complex. Our assay can also distinguish between primer binding to the polymerase or exonuclease domain and, contrary to ensemble-averaged studies, we find that stable exonuclease binding only occurs with a mismatched primer terminus

Crossover from inelastic magnetic scattering of Cooper pairs to spin-wave dispersion produces low-energy kink in cuprates

We present GW based self-energy calculations for the state of coexisting spin-density wave and d-wave superconductivity in a series of cuprate superconductors. In these systems, the spin resonance spectrum exhibits the typical `hour-glass' form, whose upward and downward dispersion branches come from the gapped spin-wave and magnetic scattering of Cooper pairs, respectively. We show that the crossover between these two different dispersion features leads to an abrupt change in slope in the quasiparticle self-energy, and hence the low-energy kink commences in the single-particle quasiparticle spectrum. The calculated electron-bosonic coupling strength agrees well with experimental data as a function of temperature, doping and material. The results demonstrate that the electronic correlations dominate the quasiparticle spectra of cuprates near the low-energy kink, suggesting a relatively smaller role for phonons in this energy range.Comment: 8 pages, 6 figures. revised version submitted to PR

Bridging k- and q- Space in the Cuprates: Comparing ARPES and STM Results

A critical comparison is made between the ARPES-derived spectral function and STM studies of Friedel-like oscillations in Bi_2Sr_2CaCu_2O_{8+delta} (Bi2212). The data can be made approximately consistent, provided that (a) the elastic scattering seen in ARPES is predominantly small-angle scattering and (b) the `peak' feature seen in ARPES is really a dispersive `bright spot', smeared into a line by limited energy resolution; these are the `bright spots' which control the quasiparticle interferences. However, there is no indication of bilayer splitting in the STM data.Comment: 6 eps figures, revte

Carcinogenic adducts induce distinct DNA polymerase binding orientations

DNA polymerases must accurately replicate DNA to maintain genome integrity. Carcinogenic adducts, such as 2-aminofluorene (AF) and N-acetyl-2-aminofluorene (AAF), covalently bind DNA bases and promote mutagenesis near the adduct site. The mechanism by which carcinogenic adducts inhibit DNA synthesis and cause mutagenesis remains unclear. Here, we measure interactions between a DNA polymerase and carcinogenic DNA adducts in real-time by single-molecule fluorescence. We find the degree to which an adduct affects polymerase binding to the DNA depends on the adduct location with respect to the primer terminus, the adduct structure and the nucleotides present in the solution. Not only do the adducts influence the polymerase dwell time on the DNA but also its binding position and orientation. Finally, we have directly observed an adduct- and mismatch-induced intermediate state, which may be an obligatory step in the DNA polymerase proofreading mechanism

Structural, magnetic, dielectric and mechanical properties of (Ba,Sr)MnO3_3 ceramics

Ceramic samples, produced by conventional sintering method in ambient air, 6H-SrMnO$_3$(6H-SMO), 15R-BaMnO$_3$(15R-BMO), 4H-Ba$_{0.5}$Sr$_{0.5}$MnO$_3$(4H-BSMO) were studied. In the XRD measurements for SMO the new anomalies of the lattice parameters at 600-800 K range and the increasing of thermal expansion coefficients with a clear maximum in a vicinity at 670 K were detected. The N$\acute{e}$el phase transition for BSMO was observed at $T_N$=250 K in magnetic measurements and its trace was detected in dielectric, FTIR, DSC, and DMA experiments. The enthalpy and entropy changes of the phase transition for BSMO at $T_N$ were determined as 17.5 J/mol and 70 mJ/K mol, respectively. The activation energy values and relaxation times characteristic for relaxation processes were determined from the Arrhenius law. Results of ab initio simulations showed that the contribution of the exchange correlation energy to the total energy is about 30%.Comment: 12 pages, 12 figure

How different Fermi surface maps emerge in photoemission from Bi2212

We report angle-resolved photoemission spectra (ARPES) from the Fermi energy ($E_F$) over a large area of the ($k_x,k_y$) plane using 21.2 eV and 32 eV photons in two distinct polarizations from an optimally doped single crystal of Bi$_2$Sr$_2$CaCu$_2$O$_{8+\delta}$ (Bi2212), together with extensive first-principles simulations of the ARPES intensities. The results display a wide-ranging level of accord between theory and experiment and clarify how myriad Fermi surface (FS) maps emerge in ARPES under various experimental conditions. The energy and polarization dependences of the ARPES matrix element help disentangle primary contributions to the spectrum due to the pristine lattice from those arising from modulations of the underlying tetragonal symmetry and provide a route for separating closely placed FS sheets in low dimensional materials.Comment: submitted to PR

A cluster of highly polymorphic dinucleotide repeats in intron 17b of the cystic fibrosis transmembrane conductance regulator (CFTR) gene

A cluster of highly polymorphic dinucleotide repeats has been detected in intron 17b of the CFTR gene, 200 bp downstream from the preceding exon. At least 24 alleles, with sizes ranging from 7 to 56 units of a TA repeat, have been identified in a panel of 92 unrelated carriers of cystic fibrosis (CF). The common ones are those with 7, 30, and 31 dinucleotide units, with frequencies of .22, .19, and .12, respectively, among the non-CF chromosomes. Mendelian, codominant segregation of the alleles has been demonstrated in family studies, as expected. A less polymorphic dinucleotide (CA repeat) cluster has also been detected in a region 167 bp downstream from the TA repeat. The length of the CA repeat cluster varies from 11 to 17 dinucleotide units, and it appears to have an inverse relationship to that of the TA repeats. These dinucleotide repeats should be useful in genetic linkage studies, in counseling for CF families with unknown mutations, and in tracing the origins of the various mutant CF alleles.published_or_final_versio