Configurational Temperature in Membrane Simulations Using Dissipative Particle Dynamics

The use of excessively long timesteps in dissipative particle dynamics simulations may produce simulation artifacts due to the generation of configurations which are not representative of the desired canonical ensemble. The configurational temperature, amongst other quantities, may be used to assess the extent of the deviation from equilibrium. This paper presents results for simulations of models of water, and lipid bilayer membranes, to illustrate the nature of the problems.Comment: 13 pages, 7 figures, RevTex

Offshoring the Nation's water

When the ten regional water authorities in England and Wales were floated on the London Stock Exchange in 1989, a shift in ownership inevitably followed from the privatization of household water. The public listing of shares in water companies initially created a wide distribution of ownership across the UK population, with preference given to those who paid the water bills. Controls were put in place to ensure that no one individual or company could monopolize the shareholdings, with the UK government retaining a ‘golden share’ precisely to avoid such an outcome. Once those shares were relinquished by the government in 1994, however, the ownership of the nation’s water started to shift abroad, with foreign investors largely attracted by the low risk, stable returns on offer. Some two decades on, with seven of the ten water authorities now in foreign ownership, the contrast from the idea of a British shareholding public that drove the early UK privatisations could not be greater

A note on muscle composition and colour of Holstein-Friesian, Piedmontese × Holstein-Friesian and Romagnola × Holstein-Friesian steers.

peer-reviewedHolstein-Friesian (HF), Piedmontese × Holstein-Friesian (PM) and Romagnola × Holstein-Friesian (RO) steers were compared for muscle composition and colour. A total of 120 steers in a 3 breed types (HF, PM and RO) × 2 feeding levels (low and high) × 2 finishing periods (short, S and extended, E) factorial experiment were used. Three samples of m. longissimus were taken for chemical analysis, measurement of drip loss and Hunterlab colour measurements. Muscle moisture and protein concentrations were lower, and lipid concentration was higher for HF than for PM and RO, which were similar. There were no effects of feeding level on chemical composition, but after blooming all colour values except hue were lower for the higher feeding level. The E finishing period reduced moisture, protein, drip-loss, L (lightness), a (redness) and chroma values. It is concluded that PM and RO had similar muscle composition but HF had a higher lipid concentration. Feeding level had few effects on muscle composition, but extended finishing increased all measures of fatness and reduced colour values

Ecology of fishes in Upper Newport Bay, California: seasonal dynamics and community structure

A total of 366 bimonthly (January 1978-January 1979) samples taken with six types of gear (otter trawl, gill net, bag seine, small seine, drop net, square enclosure - all with replication except the gill net) at four stations in upper Newport Bay, California yielded 51,816 fishes belonging to 46 species and weighing over 353 kg. Atherinops affinis (topsmelt) was the most abundant species accounting for 76% of total individuals. Seven species, all of low trophic levels, made up over 97% of the total catch. Mugil cephalus (striped mullet) ranked first in biomass (= 36% of the total) with six species accounting for more than 80% of the total biomass. The largest number of individuals (71%) was collected with the bag seine, the greatest number of species (35) was captured with the otter trawl and the largest percentage of the biomass (56%)was obtained with the gill net. Species richness, number of individuals and biomass were lowest in January (1978 or 1979) or March and highest in July (numbers, biomass) or September (species). Bimonthly diversity (H') values ranged from 0.48 to 2.17 (overall value 1.05) and tended to be inversely related to abundance levels. Species richness was greatest at Station 4 (the lowermost station) and least at Station 1 (the uppermost station). Numbers of individuals and biomass peaked at Station 2 and reached lowest levels at Station 1. Length-frequency analysis of six of the most abundant species indicated utilization of the upper bay by two or more stages in the life history of these species. More than 92,000 eggs belonging to seven taxa and an unknown category and 426 larvae from 20 taxa were collected with a 0.5 m net mounted on an epibenthic sled during the same bimonthly periods and at the same stations as the juvenile/adult samples. Most of the eggs were collected at Station 2 in May with the numbers overwhelmingly dominated by those of Anchoa compressa (deepbody anchovy) (99.7% of total numbers). The most abundant larva was that of Clevelandia ios (arrow goby). Nearly 60% of the total larval catch was made up of members of the family Gobiidae. Larval taxa and individuals were fewest in January (1978). The number of taxa was highest in March, September and January (1979) whereas larval numbers peaked in May. The number of taxa and of individual larvae varied only slightly among the four stations. Asymptotic species accumulation curves indicated adequate sampling of juvenile/adult fishes. Cluster analysis produced eight species groups of resident and periodic species that variously utilize the three main habitats (channel, inshore, pannes) in the upper bay. Species richness and abundance were positively correlated with both temperature and salinity. Temperature, salinity and depth of capture were frequently correlated with individual species abundances and were used in combination to partially explain the spatial utilization of species and species groups. The upper bay fish community is important and worthy of preservation for at least three reasons: 1) it contains species assemblages not duplicated in any other coastal environment; 2) it contains life history stages of a variety of coastal fish species; and 3) it contains large populations of small, low-trophic level species and juveniles of other species which serve as forage for larger, predatory species that are frequently of economic importance. Members of the fish community respond noticeably to altered environmental conditions such as the heavy rainfall (and accompanying low salinity and high turbidity) that occurred during the early months of 1978. The short and long term, as yet often unpredictable, fluctuations in the populations emphasize the need for periodic monitoring and for the development of a mathematical model of the fish community if it is to be thoroughly understood and properly managed. (102pp.

Econometric modelling in finance and risk management: An overview

This paper gives an overview about the sixteen papers included in this special issue. The papers in this special issue cover a wide range of topics. Such topics include discussing a class of tests for correlation, estimation of realized volatility, modeling time series and continuous-time models with long-range dependence, estimation and specification testing of time series models, estimation in a factor model with high-dimensional problems, finite-sample examination of quasi-maximum likelihood estimation in an autoregressive conditional duration model, and estimation in a dynamic additive quantile model.Continuous-time model; correlation test; dynamic additive model; estimation of realized volatility; factor model; long-range dependence

Realizing the Potential of Marine Biotechnology : Challenges and Opportunities

A paid open access option is available for this journal. Author's final version or publisher's version/PDF Authors may deposit in funding agency designated repository after 12 monthsPeer reviewedPublisher PD

Spin dynamics for the Lebwohl-Lasher model

A spin dynamics algorithm, combining checkerboard updating and a rotation algorithm based on the local second-rank ordering field, is developed for the Lebwohl-Lasher model of liquid crystals. The method is shown to conserve energy well and to generate simulation averages that are consistent with those obtained by Monte Carlo simulation. However, care must be taken to avoid the undesirable effects of director rotation, and a method for doing this is proposed

"Realized Volatility Risk"

In this paper we document that realized variation measures constructed from high-frequency returns reveal a large degree of volatility risk in stock and index returns, where we characterize volatility risk by the extent to which forecasting errors in realized volatility are substantive. Even though returns standardized by ex post quadratic variation measures are nearly gaussian, this unpredictability brings considerably more uncertainty to the empirically relevant ex ante distribution of returns. Carefully modeling this volatility risk is fundamental. We propose a dually asymmetric realized volatility (DARV) model, which incorporates the important fact that realized volatility series are systematically more volatile in high volatility periods. Returns in this framework display time varying volatility, skewness and kurtosis. We provide a detailed account of the empirical advantages of the model using data on the S&P 500 index and eight other indexes and stocks.

Joining up the thinking : how science 'learning progressions' could address problems inherent in primary–secondary transition

ABSTRACT Dips in pupils’ science attitudes and performance when they transfer from primary to secondary school in England are well established. They have been related to a variety of factors, including repetition of science content at year 7 and differences in the pedagogical approaches taken by primary and secondary teachers. One potential way forward would be to use data from research studies that have surveyed how pupils’ science thinking develops across key stage 2 (7- to 11-year-olds) and key stage 3 (11- to 14-year-olds). These ‘learning progressions’ can provide continuity that takes into account pupils’ changing science concepts over the transfer period and so help ease transition